RNA–Protein interactions for RNA: YLR261C

VPS63, Transcript of Putative protein of unknown function, yeast

Gene VPS63, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	YLR261C	AIR1	P40507	360 aa	Known RBP	5.53	□□□□□ -1.52
VPS63	YLR261C	CST6	P40535	587 aa		5.53	□□□□□ -1.52
VPS63	YLR261C	CLA4	P48562	842 aa		5.53	□□□□□ -1.52
VPS63	YLR261C	YPL062W	Q02781	134 aa		5.53	□□□□□ -1.52
VPS63	YLR261C	FRK1	Q03002	865 aa	Predicted RBP	5.53	□□□□□ -1.52
VPS63	YLR261C	PUS5	Q06244	254 aa		5.53	□□□□□ -1.52
VPS63	YLR261C	CPS1	P27614	576 aa		5.52	□□□□□ -1.53
VPS63	YLR261C	RRD1	P40454	393 aa	Known RBP	5.52	□□□□□ -1.53
VPS63	YLR261C	BDP1	P46678	594 aa		5.52	□□□□□ -1.53
VPS63	YLR261C	RIM21	P48565	533 aa		5.52	□□□□□ -1.53
VPS63	YLR261C	NAF1	P53919	492 aa	Known RBP	5.52	□□□□□ -1.53
VPS63	YLR261C	MRX10	Q05648	414 aa		5.52	□□□□□ -1.53
VPS63	YLR261C	MCM16	Q12262	181 aa		5.52	□□□□□ -1.53
VPS63	YLR261C	TEC1	P18412	486 aa		5.51	□□□□□ -1.53
VPS63	YLR261C	TTI1	P36097	1038 aa		5.51	□□□□□ -1.53
VPS63	YLR261C	EMP47	P43555	445 aa		5.51	□□□□□ -1.53
VPS63	YLR261C	YPR084W	Q06821	456 aa		5.51	□□□□□ -1.53
VPS63	YLR261C	TPD3	P31383	635 aa		5.5	□□□□□ -1.53
VPS63	YLR261C	RDS2	P19541	446 aa	Known RBP	5.49	□□□□□ -1.53
VPS63	YLR261C	VAC17	P25591	423 aa		5.49	□□□□□ -1.53
VPS63	YLR261C	GUT2	P32191	649 aa		5.48	□□□□□ -1.53
VPS63	YLR261C	BRE2	P43132	505 aa		5.48	□□□□□ -1.53
VPS63	YLR261C	STE20	Q03497	939 aa	Known RBP	5.47	□□□□□ -1.53
VPS63	YLR261C	SUB2	Q07478	446 aa	Known RBP	5.47	□□□□□ -1.53
VPS63	YLR261C	KIP2	P28743	706 aa		5.46	□□□□□ -1.54
VPS63	YLR261C	KTR7	P40504	517 aa		5.46	□□□□□ -1.54
VPS63	YLR261C	FRA1	Q07825	749 aa		5.46	□□□□□ -1.54
VPS63	YLR261C	IXR1	P33417	597 aa		5.45	□□□□□ -1.54
VPS63	YLR261C	YPP1	P46951	817 aa		5.45	□□□□□ -1.54
VPS63	YLR261C	ENV9	Q08651	330 aa		5.45	□□□□□ -1.54
VPS63	YLR261C	PEP12	P32854	288 aa		5.44	□□□□□ -1.54
VPS63	YLR261C	APP1	P53933	587 aa		5.44	□□□□□ -1.54
VPS63	YLR261C	SSA4	P22202	642 aa	Known RBP	5.43	□□□□□ -1.54
VPS63	YLR261C	SOH1	P38633	127 aa		5.43	□□□□□ -1.54
VPS63	YLR261C	NOB1	Q08444	459 aa	Known RBP	5.43	□□□□□ -1.54
VPS63	YLR261C	SYH1	Q02875	849 aa	Known RBP	5.42	□□□□□ -1.54
VPS63	YLR261C	YML083C	Q04526	418 aa		5.42	□□□□□ -1.54
VPS63	YLR261C	PUP1	P25043	261 aa		5.41	□□□□□ -1.54
VPS63	YLR261C	GAR1	P28007	205 aa	Known RBP	5.41	□□□□□ -1.54
VPS63	YLR261C	TGL4	P36165	910 aa		5.41	□□□□□ -1.54
VPS63	YLR261C	APL6	P46682	809 aa		5.41	□□□□□ -1.54
VPS63	YLR261C	CDC4	P07834	779 aa		5.4	□□□□□ -1.54
VPS63	YLR261C	HAL5	P38970	855 aa	Known RBP	5.4	□□□□□ -1.54
VPS63	YLR261C	GCR2	Q01722	534 aa		5.4	□□□□□ -1.54
VPS63	YLR261C	MRX12	P47084	519 aa		5.39	□□□□□ -1.55
VPS63	YLR261C	ECM23	Q02710	187 aa		5.39	□□□□□ -1.55
VPS63	YLR261C	ISR1	Q06098	443 aa	Known RBP	5.39	□□□□□ -1.55
VPS63	YLR261C	SIS2	P36024	562 aa		5.37	□□□□□ -1.55
VPS63	YLR261C	EMW1	P42842	904 aa	Known RBP	5.37	□□□□□ -1.55
VPS63	YLR261C	HED1	Q03937	162 aa		5.37	□□□□□ -1.55
VPS63	YLR261C	ATG20	Q07528	640 aa		5.37	□□□□□ -1.55
VPS63	YLR261C	MET22	P32179	357 aa		5.36	□□□□□ -1.55
VPS63	YLR261C	ATG3	P40344	310 aa		5.36	□□□□□ -1.55
VPS63	YLR261C	MET32	Q12041	191 aa		5.36	□□□□□ -1.55
VPS63	YLR261C	SSA1	P10591	642 aa	Known RBP	5.35	□□□□□ -1.55
VPS63	YLR261C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
VPS63	YLR261C	GAL2	P13181	574 aa		5.34	□□□□□ -1.55
VPS63	YLR261C	MIP1	P15801	1254 aa		5.34	□□□□□ -1.55
VPS63	YLR261C	PDI1	P17967	522 aa	Known RBP	5.34	□□□□□ -1.55
VPS63	YLR261C	MRT4	P33201	236 aa	Known RBP	5.34	□□□□□ -1.55
VPS63	YLR261C	MKS1	P34072	584 aa		5.34	□□□□□ -1.55
VPS63	YLR261C	UTP13	Q05946	817 aa	Known RBP	5.34	□□□□□ -1.55
VPS63	YLR261C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.33	□□□□□ -1.56	not detected
VPS63	YLR261C	GEF1	P37020	779 aa		5.33	□□□□□ -1.56
VPS63	YLR261C	UBX7	P38349	436 aa		5.33	□□□□□ -1.56
VPS63	YLR261C	ACS2	P52910	683 aa	Known RBP	5.33	□□□□□ -1.56
VPS63	YLR261C	DFG5	Q05031	458 aa		5.33	□□□□□ -1.56
VPS63	YLR261C	HDA3	Q06623	655 aa		5.33	□□□□□ -1.56
VPS63	YLR261C	YBL086C	P38177	466 aa		5.32	□□□□□ -1.56
VPS63	YLR261C	PHO87	P25360	923 aa		5.31	□□□□□ -1.56
VPS63	YLR261C	FBP26	P32604	452 aa		5.31	□□□□□ -1.56
VPS63	YLR261C	ISU1	Q03020	165 aa		5.31	□□□□□ -1.56
VPS63	YLR261C	ASH1	P34233	588 aa		5.3	□□□□□ -1.56
VPS63	YLR261C	ROM1	P53046	1155 aa		5.3	□□□□□ -1.56
VPS63	YLR261C	DAT1	P13483	248 aa	Known RBP	5.29	□□□□□ -1.56
VPS63	YLR261C	NTH2	P35172	780 aa		5.29	□□□□□ -1.56
VPS63	YLR261C	AIM9	P40053	627 aa	Known RBP	5.29	□□□□□ -1.56
VPS63	YLR261C	RPL34A	P87262	121 aa	Predicted RBP	5.29	□□□□□ -1.56
VPS63	YLR261C	TSC13	Q99190	310 aa		5.29	□□□□□ -1.56
VPS63	YLR261C	STE6	P12866	1290 aa		5.28	□□□□□ -1.56
VPS63	YLR261C	HAP4	P14064	554 aa		5.28	□□□□□ -1.56
VPS63	YLR261C	UTR2	P32623	467 aa		5.28	□□□□□ -1.56
VPS63	YLR261C	YDL176W	Q12027	708 aa		5.28	□□□□□ -1.56
VPS63	YLR261C	SPT2	P06843	333 aa	Predicted RBP	5.27	□□□□□ -1.57
VPS63	YLR261C	YDR444W	Q04093	687 aa		5.27	□□□□□ -1.57
VPS63	YLR261C	BDS1	Q08347	646 aa		5.27	□□□□□ -1.57
VPS63	YLR261C	WTM2	Q12206	467 aa		5.27	□□□□□ -1.57
VPS63	YLR261C	SWI5	P08153	709 aa		5.26	□□□□□ -1.57
VPS63	YLR261C	RPS6A	P0CX37	236 aa	Known RBP	5.26	□□□□□ -1.57
VPS63	YLR261C	RPS6B	P0CX38	236 aa	Predicted RBP	5.26	□□□□□ -1.57
VPS63	YLR261C	AFT1	P22149	690 aa		5.26	□□□□□ -1.57
VPS63	YLR261C	UGA3	P26370	528 aa		5.26	□□□□□ -1.57
VPS63	YLR261C	TPS3	P38426	1054 aa	Known RBP	5.26	□□□□□ -1.57
VPS63	YLR261C	SLX8	P40072	274 aa		5.26	□□□□□ -1.57
VPS63	YLR261C	HST3	P53687	447 aa		5.26	□□□□□ -1.57
VPS63	YLR261C	GAS4	Q08271	471 aa		5.25	□□□□□ -1.57
VPS63	YLR261C	UTP7	P40055	554 aa	Known RBP	5.24	□□□□□ -1.57
VPS63	YLR261C	YFL034W	P43564	1073 aa		5.24	□□□□□ -1.57
VPS63	YLR261C	YJR115W	P47152	169 aa		5.24	□□□□□ -1.57
VPS63	YLR261C	LCB5	Q06147	687 aa	Known RBP	5.24	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms