RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C NOP14Q99207 810 aaKnown RBP4.55□□□□□ -1.68
SPT23YKL020C RKR1Q04781 1562 aa4.55□□□□□ -1.68
SPT23YKL020C TFG1P41895 735 aaPredicted RBP4.55□□□□□ -1.68
SPT23YKL020C VPS60Q03390 229 aa4.55□□□□□ -1.68
SPT23YKL020C YLR257WQ06146 321 aaKnown RBP4.55□□□□□ -1.68
SPT23YKL020C CDC45Q08032 650 aa4.55□□□□□ -1.68
SPT23YKL020C YOL087CQ99247 1116 aa4.55□□□□□ -1.68
SPT23YKL020C TCD1P38756 429 aa4.55□□□□□ -1.68
SPT23YKL020C TPM2P40414 161 aa4.55□□□□□ -1.68
SPT23YKL020C TEA1P47988 759 aa4.55□□□□□ -1.68
SPT23YKL020C CEF1Q03654 590 aaPredicted RBP4.55□□□□□ -1.68
SPT23YKL020C NDL1Q06568 189 aa4.55□□□□□ -1.68
SPT23YKL020C RVB2Q12464 471 aaKnown RBP4.55□□□□□ -1.68
SPT23YKL020C GDB1Q06625 1536 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-HO13535 1793 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-DR5P0C2I2 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-DR6P0C2I3 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-LR2P0C2I5 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-LR3P0C2I6 1755 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C TY1B-PR1P0C2I9 1755 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C TY1B-PR2P0C2J0 1756 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-PR3P0C2J1 1755 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C TY1B-JR1P47098 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-ML2Q03434 1755 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C TY1B-ER1Q03612 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-ML1Q04711 1755 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C TY1B-GR2Q12269 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-OLQ12273 1755 aa4.54□□□□□ -1.68
SPT23YKL020C TY1B-PLQ12414 1755 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C RPP0P05317 312 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C RAD9P14737 1309 aa4.54□□□□□ -1.68
SPT23YKL020C MSM1P22438 575 aa4.54□□□□□ -1.68
SPT23YKL020C CCM1P48237 864 aaPredicted RBP4.54□□□□□ -1.68
SPT23YKL020C PRP43P53131 767 aaKnown RBP4.54□□□□□ -1.68
SPT23YKL020C VTC3Q02725 835 aa4.54□□□□□ -1.68
SPT23YKL020C DNF2Q12675 1612 aa4.54□□□□□ -1.68
SPT23YKL020C MPE1P35728 441 aaKnown RBP4.53□□□□□ -1.68
SPT23YKL020C RIX7Q07844 837 aaKnown RBP4.53□□□□□ -1.68
SPT23YKL020C GLE1Q12315 538 aa4.53□□□□□ -1.68
SPT23YKL020C RPA135P22138 1203 aaKnown RBP4.53□□□□□ -1.68
SPT23YKL020C RNT1Q02555 471 aa4.53□□□□□ -1.68
SPT23YKL020C RRB1Q04225 511 aaKnown RBP4.53□□□□□ -1.68
SPT23YKL020C TY1B-BRQ12193 1756 aa4.53□□□□□ -1.68
SPT23YKL020C TY1B-GR3Q12316 1755 aa4.53□□□□□ -1.68
SPT23YKL020C TY1B-ORQ92393 1755 aa4.53□□□□□ -1.68
SPT23YKL020C GEA2P39993 1459 aaKnown RBP4.53□□□□□ -1.68
SPT23YKL020C CLB1P24868 471 aa4.53□□□□□ -1.68
SPT23YKL020C SPC42P36094 363 aa4.53□□□□□ -1.68
SPT23YKL020C NMD3P38861 518 aaKnown RBP4.53□□□□□ -1.68
SPT23YKL020C KAR3P17119 729 aa4.52□□□□□ -1.69
SPT23YKL020C PHO87P25360 923 aa4.52□□□□□ -1.69
SPT23YKL020C VPS27P40343 622 aaKnown RBP4.52□□□□□ -1.69
SPT23YKL020C MRX12P47084 519 aa4.52□□□□□ -1.69
SPT23YKL020C HOS3Q02959 697 aaKnown RBP4.52□□□□□ -1.69
SPT23YKL020C ARR1Q06596 294 aa4.52□□□□□ -1.69
SPT23YKL020C HOS2P53096 452 aaPredicted RBP4.52□□□□□ -1.69
SPT23YKL020C RSC1P53236 928 aa4.52□□□□□ -1.69
SPT23YKL020C PAP2P53632 584 aaKnown RBP4.52□□□□□ -1.69
SPT23YKL020C BNI5P53890 448 aaKnown RBP4.52□□□□□ -1.69
SPT23YKL020C SGT2Q12118 346 aaKnown RBP4.52□□□□□ -1.69
SPT23YKL020C HSP42Q12329 375 aa4.52□□□□□ -1.69
SPT23YKL020C KEX2P13134 814 aa4.51□□□□□ -1.69
SPT23YKL020C PSO2P30620 661 aa4.51□□□□□ -1.69
SPT23YKL020C RIA1P53893 1110 aa4.51□□□□□ -1.69
SPT23YKL020C VPS15P22219 1454 aa4.51□□□□□ -1.69
SPT23YKL020C TY3B-IQ7LHG5 1498 aaKnown RBP4.51□□□□□ -1.69
SPT23YKL020C IES2P40154 320 aa4.51□□□□□ -1.69
SPT23YKL020C JJJ1P53863 590 aa4.51□□□□□ -1.69
SPT23YKL020C VPS30Q02948 557 aa4.51□□□□□ -1.69
SPT23YKL020C PUS1Q12211 544 aaKnown RBP4.51□□□□□ -1.69
SPT23YKL020C SAC3P46674 1301 aa4.51□□□□□ -1.69
SPT23YKL020C YBT1P32386 1661 aa4.51□□□□□ -1.69
SPT23YKL020C SWI6P09959 803 aa4.51□□□□□ -1.69
SPT23YKL020C PXR1P53335 271 aaPredicted RBP4.51□□□□□ -1.69
SPT23YKL020C YNL247WP53852 767 aaKnown RBP4.51□□□□□ -1.69
SPT23YKL020C LCD1Q04377 747 aa4.51□□□□□ -1.69
SPT23YKL020C RSC2Q06488 889 aa4.51□□□□□ -1.69
SPT23YKL020C YEF3P16521 1044 aaKnown RBP4.5□□□□□ -1.69
SPT23YKL020C STE5P32917 917 aa4.5□□□□□ -1.69
SPT23YKL020C YKR023WP36119 530 aaKnown RBP4.5□□□□□ -1.69
SPT23YKL020C ALD2P47771 506 aa4.5□□□□□ -1.69
SPT23YKL020C GYP7P48365 746 aa4.5□□□□□ -1.69
SPT23YKL020C UBP10P53874 792 aaPredicted RBP4.5□□□□□ -1.69
SPT23YKL020C RPO31P04051 1460 aa4.5□□□□□ -1.69
SPT23YKL020C SEC6P32844 805 aa4.5□□□□□ -1.69
SPT23YKL020C YGL081WP53156 320 aa4.5□□□□□ -1.69
SPT23YKL020C BNI4P53858 892 aa4.5□□□□□ -1.69
SPT23YKL020C MRS2Q01926 470 aa4.5□□□□□ -1.69
SPT23YKL020C HAP5Q02516 242 aa4.5□□□□□ -1.69
SPT23YKL020C RPL17AP05740 184 aaKnown RBP4.5□□□□□ -1.69
SPT23YKL020C THR4P16120 514 aaKnown RBP4.5□□□□□ -1.69
SPT23YKL020C OPI1P21957 404 aa4.5□□□□□ -1.69
SPT23YKL020C RIM101P33400 625 aa4.5□□□□□ -1.69
SPT23YKL020C KDX1P36005 433 aa4.5□□□□□ -1.69
SPT23YKL020C APC2Q12440 853 aa4.5□□□□□ -1.69
SPT23YKL020C MET5P47169 1442 aa4.49□□□□□ -1.69
SPT23YKL020C CDC31P06704 161 aaKnown RBP4.49□□□□□ -1.69
SPT23YKL020C GCD6P32501 712 aaKnown RBP4.49□□□□□ -1.69
SPT23YKL020C BLI1P35727 113 aa4.49□□□□□ -1.69
SPT23YKL020C SWH1P35845 1188 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms