RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W MET1P36150 593 aa7.77□□□□□ -1.17
NMD5YJR132W OCA1P50946 238 aaPredicted RBP7.77□□□□□ -1.17
NMD5YJR132W RNH70P53331 553 aa7.77□□□□□ -1.17
NMD5YJR132W ERV41Q04651 352 aa7.77□□□□□ -1.17
NMD5YJR132W GLE1Q12315 538 aa7.77□□□□□ -1.17
NMD5YJR132W REX2P54964 269 aaKnown RBP7.77□□□□□ -1.17
NMD5YJR132W SIT4P20604 311 aa7.76□□□□□ -1.17
NMD5YJR132W PHO87P25360 923 aa7.76□□□□□ -1.17
NMD5YJR132W UGA3P26370 528 aa7.76□□□□□ -1.17
NMD5YJR132W DBP10Q12389 995 aaKnown RBP7.76□□□□□ -1.17
NMD5YJR132W KAR1P11927 433 aa7.76□□□□□ -1.17
NMD5YJR132W NOP14Q99207 810 aaKnown RBP7.76□□□□□ -1.17
NMD5YJR132W SEC23P15303 768 aaKnown RBP7.75□□□□□ -1.17
NMD5YJR132W NSE3Q05541 303 aa7.75□□□□□ -1.17
NMD5YJR132W PCL8Q08966 492 aa7.75□□□□□ -1.17
NMD5YJR132W VMA1P17255 1071 aaKnown RBP7.75□□□□□ -1.17
NMD5YJR132W RTG2P32608 588 aaKnown RBP7.75□□□□□ -1.17
NMD5YJR132W SLD2P34252 453 aa7.75□□□□□ -1.17
NMD5YJR132W KEL2P50090 882 aa7.75□□□□□ -1.17
NMD5YJR132W APC2Q12440 853 aa7.75□□□□□ -1.17
NMD5YJR132W ARC19P33204 171 aaKnown RBP7.74□□□□□ -1.17
NMD5YJR132W KDX1P36005 433 aa7.74□□□□□ -1.17
NMD5YJR132W LAM1P38851 1228 aa7.74□□□□□ -1.17
NMD5YJR132W RAD26P40352 1085 aa7.74□□□□□ -1.17
NMD5YJR132W TFG1P41895 735 aaPredicted RBP7.74□□□□□ -1.17
NMD5YJR132W SPO71Q03868 1245 aa7.74□□□□□ -1.17
NMD5YJR132W VTI1Q04338 217 aa7.74□□□□□ -1.17
NMD5YJR132W SSB1P11484 613 aaKnown RBP7.74□□□□□ -1.17
NMD5YJR132W SSB2P40150 613 aaKnown RBP7.74□□□□□ -1.17
NMD5YJR132W YNL247WP53852 767 aaKnown RBP7.74□□□□□ -1.17
NMD5YJR132W GCD6P32501 712 aaKnown RBP7.73□□□□□ -1.17
NMD5YJR132W RKM3P38222 552 aa7.73□□□□□ -1.17
NMD5YJR132W YEF3P16521 1044 aaKnown RBP7.73□□□□□ -1.17
NMD5YJR132W CCM1P48237 864 aaPredicted RBP7.73□□□□□ -1.17
NMD5YJR132W CLP1Q08685 445 aaPredicted RBP7.73□□□□□ -1.17
NMD5YJR132W LSP1Q12230 341 aaKnown RBP7.73□□□□□ -1.17
NMD5YJR132W RPN12P32496 274 aa7.72□□□□□ -1.17
NMD5YJR132W IME2P32581 645 aa7.72□□□□□ -1.17
NMD5YJR132W PAP2P53632 584 aaKnown RBP7.72□□□□□ -1.17
NMD5YJR132W SMD2Q06217 110 aaKnown RBP7.72□□□□□ -1.17
NMD5YJR132W IRC3Q06683 689 aa7.72□□□□□ -1.17
NMD5YJR132W MAK16P10962 306 aaPredicted RBP7.72□□□□□ -1.17
NMD5YJR132W RAD17P48581 401 aa7.72□□□□□ -1.17
NMD5YJR132W SEN54Q02825 467 aaPredicted RBP7.72□□□□□ -1.17
NMD5YJR132W OYE2Q03558 400 aaKnown RBP7.71□□□□□ -1.18
NMD5YJR132W FUI1P38196 639 aa7.7□□□□□ -1.18
NMD5YJR132W SGS1P35187 1447 aa7.7□□□□□ -1.18
NMD5YJR132W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
NMD5YJR132W TRS33Q99394 268 aa7.7□□□□□ -1.18
NMD5YJR132W DSF2P38213 736 aa7.69□□□□□ -1.18
NMD5YJR132W PAF1P38351 445 aa7.69□□□□□ -1.18
NMD5YJR132W JJJ1P53863 590 aa7.69□□□□□ -1.18
NMD5YJR132W UTP4Q06679 776 aaKnown RBP7.69□□□□□ -1.18
NMD5YJR132W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
NMD5YJR132W ATG19P35193 415 aa7.69□□□□□ -1.18
NMD5YJR132W SMC3P47037 1230 aa7.69□□□□□ -1.18
NMD5YJR132W PUF6Q04373 656 aaKnown RBP7.69□□□□□ -1.18
NMD5YJR132W HST2P53686 357 aa7.69□□□□□ -1.18
NMD5YJR132W ARR1Q06596 294 aa7.69□□□□□ -1.18
NMD5YJR132W HEM3P28789 327 aa7.68□□□□□ -1.18
NMD5YJR132W RPC37P36121 282 aa7.68□□□□□ -1.18
NMD5YJR132W EFM2P38347 419 aa7.68□□□□□ -1.18
NMD5YJR132W STM1P39015 273 aaKnown RBP7.68□□□□□ -1.18
NMD5YJR132W NDL1Q06568 189 aa7.68□□□□□ -1.18
NMD5YJR132W TCB1Q12466 1186 aa7.68□□□□□ -1.18
NMD5YJR132W ATG26Q06321 1198 aa7.67□□□□□ -1.18
NMD5YJR132W RKM4Q12504 494 aa7.67□□□□□ -1.18
NMD5YJR132W TFC3P34111 1160 aa7.67□□□□□ -1.18
NMD5YJR132W MAM1P40065 302 aa7.67□□□□□ -1.18
NMD5YJR132W KEX2P13134 814 aa7.67□□□□□ -1.18
NMD5YJR132W PEP12P32854 288 aa7.67□□□□□ -1.18
NMD5YJR132W DSN1P40568 576 aa7.67□□□□□ -1.18
NMD5YJR132W TIM54P47045 478 aa7.67□□□□□ -1.18
NMD5YJR132W NNF1P47149 201 aa7.67□□□□□ -1.18
NMD5YJR132W PEX21P50091 288 aa7.67□□□□□ -1.18
NMD5YJR132W NIP100P33420 868 aa7.66□□□□□ -1.18
NMD5YJR132W UBP12P39538 1254 aa7.66□□□□□ -1.18
NMD5YJR132W RTT106P40161 455 aa7.66□□□□□ -1.18
NMD5YJR132W BMS1Q08965 1183 aaKnown RBP7.66□□□□□ -1.18
NMD5YJR132W TFB4Q12004 338 aa7.66□□□□□ -1.18
NMD5YJR132W TRX2P22803 104 aaKnown RBP7.66□□□□□ -1.18
NMD5YJR132W ANP1P32629 500 aa7.66□□□□□ -1.18
NMD5YJR132W ARB1P40024 610 aaKnown RBP7.66□□□□□ -1.18
NMD5YJR132W SRP54P20424 541 aaKnown RBP7.65□□□□□ -1.18
NMD5YJR132W ABZ1P37254 787 aaPredicted RBP7.65□□□□□ -1.18
NMD5YJR132W MEF2P39677 819 aa7.65□□□□□ -1.18
NMD5YJR132W COG8Q04632 607 aa7.65□□□□□ -1.18
NMD5YJR132W ARV1Q06541 321 aa7.65□□□□□ -1.18
NMD5YJR132W GRX4P32642 244 aa7.65□□□□□ -1.18
NMD5YJR132W GLO3P38682 493 aaKnown RBP7.65□□□□□ -1.18
NMD5YJR132W HGH1P48362 394 aaKnown RBP7.65□□□□□ -1.18
NMD5YJR132W HUL5P53119 910 aa7.65□□□□□ -1.18
NMD5YJR132W THS1P04801 734 aaKnown RBP7.65□□□□□ -1.19
NMD5YJR132W MTC5Q03897 1148 aa7.65□□□□□ -1.19
NMD5YJR132W SPT5P27692 1063 aaKnown RBP7.64□□□□□ -1.19
NMD5YJR132W BDP1P46678 594 aa7.64□□□□□ -1.19
NMD5YJR132W DSL1P53847 754 aa7.64□□□□□ -1.19
NMD5YJR132W YML119WQ03208 357 aa7.64□□□□□ -1.19
NMD5YJR132W HEH2Q03281 663 aa7.64□□□□□ -1.19
NMD5YJR132W ORM2Q06144 216 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms