RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W APP1P53933 587 aa7.71□□□□□ -1.17
TIM54YJL054W MAM3Q12296 706 aa7.71□□□□□ -1.17
TIM54YJL054W COX6P00427 148 aa7.7□□□□□ -1.18
TIM54YJL054W AI4P03878 556 aa7.7□□□□□ -1.18
TIM54YJL054W GLN1P32288 370 aaKnown RBP7.7□□□□□ -1.18
TIM54YJL054W BCK2P33306 851 aa7.7□□□□□ -1.18
TIM54YJL054W DAN4P47179 1161 aa7.7□□□□□ -1.18
TIM54YJL054W CAB1Q04430 367 aa7.7□□□□□ -1.18
TIM54YJL054W RTC1Q08281 1341 aa7.7□□□□□ -1.18
TIM54YJL054W PCS60P38137 543 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
TIM54YJL054W YDR090CQ03193 310 aa7.69□□□□□ -1.18
TIM54YJL054W MAK21Q12176 1025 aaKnown RBP7.69□□□□□ -1.18
TIM54YJL054W LEU3P08638 886 aa7.69□□□□□ -1.18
TIM54YJL054W ILV3P39522 585 aaKnown RBP7.69□□□□□ -1.18
TIM54YJL054W TFG1P41895 735 aaPredicted RBP7.69□□□□□ -1.18
TIM54YJL054W RAD9P14737 1309 aa7.68□□□□□ -1.18
TIM54YJL054W IES2P40154 320 aa7.67□□□□□ -1.18
TIM54YJL054W PML39Q03760 334 aa7.66□□□□□ -1.18
TIM54YJL054W SAP30P38429 201 aa7.64□□□□□ -1.19
TIM54YJL054W SLI15P38283 698 aa7.63□□□□□ -1.19
TIM54YJL054W MID1P41821 548 aa7.63□□□□□ -1.19
TIM54YJL054W NOP7P53261 605 aaKnown RBP7.63□□□□□ -1.19
TIM54YJL054W ENT1Q12518 454 aa7.62□□□□□ -1.19
TIM54YJL054W NUP192P47054 1683 aa7.62□□□□□ -1.19
TIM54YJL054W NAP1P25293 417 aaKnown RBP7.61□□□□□ -1.19
TIM54YJL054W TY3B-IQ7LHG5 1498 aaKnown RBP7.6□□□□□ -1.19
TIM54YJL054W DIT2P21595 489 aa7.6□□□□□ -1.19
TIM54YJL054W PEX29Q03370 554 aa7.6□□□□□ -1.19
TIM54YJL054W ENV9Q08651 330 aa7.6□□□□□ -1.19
TIM54YJL054W YMR074CQ04773 145 aa7.59□□□□□ -1.19
TIM54YJL054W CHL1P22516 861 aaPredicted RBP7.58□□□□□ -1.2
TIM54YJL054W ESL2P36168 1195 aa7.58□□□□□ -1.2
TIM54YJL054W NUP42P49686 430 aaKnown RBP7.58□□□□□ -1.2
TIM54YJL054W YDL129WQ07555 291 aa7.58□□□□□ -1.2
TIM54YJL054W RPP1BP10622 106 aaKnown RBP7.56□□□□□ -1.2
TIM54YJL054W CPS1P27614 576 aa7.56□□□□□ -1.2
TIM54YJL054W LEO1P38439 464 aa7.56□□□□□ -1.2
TIM54YJL054W RPN1P38764 993 aaKnown RBP7.56□□□□□ -1.2
TIM54YJL054W TAF8Q03750 510 aa7.56□□□□□ -1.2
TIM54YJL054W CDC73Q06697 393 aa7.56□□□□□ -1.2
TIM54YJL054W IMH1Q06704 911 aaKnown RBP7.55□□□□□ -1.2
TIM54YJL054W PRP45P28004 379 aaPredicted RBP7.54□□□□□ -1.2
TIM54YJL054W TAF5P38129 798 aa7.54□□□□□ -1.2
TIM54YJL054W RGA1P39083 1007 aa7.54□□□□□ -1.2
TIM54YJL054W GLC3P32775 704 aa7.53□□□□□ -1.2
TIM54YJL054W YNR021WP53723 404 aaKnown RBP7.53□□□□□ -1.2
TIM54YJL054W RCM1P53972 490 aa7.52□□□□□ -1.2
TIM54YJL054W PRE3P38624 215 aa7.52□□□□□ -1.21
TIM54YJL054W ATF2P53296 535 aa7.52□□□□□ -1.21
TIM54YJL054W DPL1Q05567 589 aa7.52□□□□□ -1.21
TIM54YJL054W MPC54Q08550 464 aa7.52□□□□□ -1.21
TIM54YJL054W ORC6P38826 435 aa7.51□□□□□ -1.21
TIM54YJL054W PEX21P50091 288 aa7.51□□□□□ -1.21
TIM54YJL054W PPH3P32345 308 aa7.5□□□□□ -1.21
TIM54YJL054W PRP5P21372 849 aaPredicted RBP7.49□□□□□ -1.21
TIM54YJL054W PSE1P32337 1089 aaKnown RBP7.48□□□□□ -1.21
TIM54YJL054W NMA111P53920 997 aa7.48□□□□□ -1.21
TIM54YJL054W RRP5Q05022 1729 aaKnown RBP7.48□□□□□ -1.21
TIM54YJL054W CSC1Q06538 782 aa7.47□□□□□ -1.21
TIM54YJL054W MVP1P40959 511 aaKnown RBP7.46□□□□□ -1.21
TIM54YJL054W ELP4Q02884 456 aaKnown RBP7.46□□□□□ -1.21
TIM54YJL054W RGR1P19263 1082 aa7.45□□□□□ -1.22
TIM54YJL054W ADE6P38972 1358 aaKnown RBP7.45□□□□□ -1.22
TIM54YJL054W SPE2P21182 396 aa7.44□□□□□ -1.22
TIM54YJL054W VRP1P37370 817 aa7.44□□□□□ -1.22
TIM54YJL054W YDR344CQ05510 147 aa7.44□□□□□ -1.22
TIM54YJL054W TUM1Q08686 304 aaKnown RBP7.44□□□□□ -1.22
TIM54YJL054W ISU2Q12056 156 aa7.44□□□□□ -1.22
TIM54YJL054W KIP3P53086 805 aaKnown RBP7.44□□□□□ -1.22
TIM54YJL054W YPR109WQ06104 294 aa7.44□□□□□ -1.22
TIM54YJL054W PSK1P31374 1356 aa7.43□□□□□ -1.22
TIM54YJL054W YRF1-2P40105 1681 aa7.43□□□□□ -1.22
TIM54YJL054W KIN1P13185 1064 aa7.43□□□□□ -1.22
TIM54YJL054W XDJ1P39102 459 aa7.43□□□□□ -1.22
TIM54YJL054W MSB3P48566 633 aaPredicted RBP7.43□□□□□ -1.22
TIM54YJL054W HAP5Q02516 242 aa7.43□□□□□ -1.22
TIM54YJL054W GAP1P19145 602 aaPredicted RBP7.42□□□□□ -1.22
TIM54YJL054W TEA1P47988 759 aa7.42□□□□□ -1.22
TIM54YJL054W ARH1P48360 493 aa7.42□□□□□ -1.22
TIM54YJL054W TFB4Q12004 338 aa7.42□□□□□ -1.22
TIM54YJL054W YRR1Q12172 810 aa7.42□□□□□ -1.22
TIM54YJL054W LEU2P04173 364 aaPredicted RBP7.41□□□□□ -1.22
TIM54YJL054W UBP1P25037 809 aa7.41□□□□□ -1.22
TIM54YJL054W PRP43P53131 767 aaKnown RBP7.41□□□□□ -1.22
TIM54YJL054W AIM7Q12156 149 aa7.41□□□□□ -1.22
TIM54YJL054W CHZ1P40019 153 aaPredicted RBP7.4□□□□□ -1.22
TIM54YJL054W DOT5P40553 215 aa7.4□□□□□ -1.22
TIM54YJL054W TCB1Q12466 1186 aa7.4□□□□□ -1.22
TIM54YJL054W RPN11P43588 306 aaKnown RBP7.39□□□□□ -1.23
TIM54YJL054W MTR4P47047 1073 aaKnown RBP7.39□□□□□ -1.23
TIM54YJL054W TY4B-HP0C2J7 1802 aa7.38□□□□□ -1.23
TIM54YJL054W TY4B-JP47024 1803 aa7.38□□□□□ -1.23
TIM54YJL054W SLM3Q12093 417 aa7.38□□□□□ -1.23
TIM54YJL054W YEF3P16521 1044 aaKnown RBP7.37□□□□□ -1.23
TIM54YJL054W SCT1P32784 759 aa7.36□□□□□ -1.23
TIM54YJL054W CSE4P36012 229 aa7.36□□□□□ -1.23
TIM54YJL054W EDE1P34216 1381 aa7.36□□□□□ -1.23
TIM54YJL054W RSF2P46974 1380 aa7.36□□□□□ -1.23
TIM54YJL054W ROM2P51862 1356 aaKnown RBP7.36□□□□□ -1.23
TIM54YJL054W PDR1P12383 1068 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms