RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	GDB1	Q06625	1536 aa		2.66	□□□□□ -1.98
STH1	YIL126W	MSM1	P22438	575 aa		2.66	□□□□□ -1.98
STH1	YIL126W	NOP8	Q08287	484 aa	Predicted RBP	2.66	□□□□□ -1.98
STH1	YIL126W	NUP157	P40064	1391 aa	Known RBP	2.66	□□□□□ -1.98
STH1	YIL126W	HSP82	P02829	709 aa	Known RBP	2.66	□□□□□ -1.98
STH1	YIL126W	IOC4	Q04213	475 aa		2.66	□□□□□ -1.98
STH1	YIL126W	PSF3	Q12146	194 aa		2.66	□□□□□ -1.98
STH1	YIL126W	SDH5	Q08230	162 aa		2.66	□□□□□ -1.98
STH1	YIL126W	TCB1	Q12466	1186 aa		2.66	□□□□□ -1.98
STH1	YIL126W	SEC3	P33332	1336 aa	Known RBP	2.66	□□□□□ -1.98
STH1	YIL126W	TPD3	P31383	635 aa		2.65	□□□□□ -1.98
STH1	YIL126W	MYO4	P32492	1471 aa		2.65	□□□□□ -1.98
STH1	YIL126W	RGD1	P38339	666 aa		2.65	□□□□□ -1.99
STH1	YIL126W	DUS1	P53759	423 aa	Known RBP	2.65	□□□□□ -1.99
STH1	YIL126W	ORC1	P54784	914 aa	Predicted RBP	2.65	□□□□□ -1.99
STH1	YIL126W	SVF1	Q05515	481 aa		2.65	□□□□□ -1.99
STH1	YIL126W	ENT1	Q12518	454 aa		2.65	□□□□□ -1.99
STH1	YIL126W	MLP2	P40457	1679 aa		2.65	□□□□□ -1.99
STH1	YIL126W	KGD2	P19262	463 aa	Predicted RBP	2.65	□□□□□ -1.99
STH1	YIL126W	GLN1	P32288	370 aa	Known RBP	2.65	□□□□□ -1.99
STH1	YIL126W	YKR018C	P36114	725 aa		2.65	□□□□□ -1.99
STH1	YIL126W	RTG3	P38165	486 aa		2.65	□□□□□ -1.99
STH1	YIL126W	RCR1	P38212	213 aa		2.65	□□□□□ -1.99
STH1	YIL126W	SLI15	P38283	698 aa		2.65	□□□□□ -1.99
STH1	YIL126W	THI12	P42883	340 aa		2.65	□□□□□ -1.99
STH1	YIL126W	THI5	P43534	340 aa		2.65	□□□□□ -1.99
STH1	YIL126W	IOC3	P43596	787 aa		2.65	□□□□□ -1.99
STH1	YIL126W	THI11	P47183	340 aa		2.65	□□□□□ -1.99
STH1	YIL126W	MSN5	P52918	1224 aa		2.65	□□□□□ -1.99
STH1	YIL126W	PUS6	P53294	404 aa		2.65	□□□□□ -1.99
STH1	YIL126W	GRX3	Q03835	250 aa		2.65	□□□□□ -1.99
STH1	YIL126W	THI13	Q07748	340 aa		2.65	□□□□□ -1.99
STH1	YIL126W	MSB4	Q12317	492 aa		2.65	□□□□□ -1.99
STH1	YIL126W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
STH1	YIL126W	VPS53	P47061	822 aa		2.64	□□□□□ -1.99
STH1	YIL126W	SRF1	Q12516	437 aa		2.64	□□□□□ -1.99
STH1	YIL126W	VTH1	P40438	1549 aa		2.64	□□□□□ -1.99
STH1	YIL126W	VTH2	P40890	1549 aa		2.64	□□□□□ -1.99
STH1	YIL126W	RPS0A	P32905	252 aa	Known RBP	2.64	□□□□□ -1.99
STH1	YIL126W	YKL222C	P35995	705 aa		2.64	□□□□□ -1.99
STH1	YIL126W	YBL086C	P38177	466 aa		2.64	□□□□□ -1.99
STH1	YIL126W	NNF2	P53253	936 aa		2.64	□□□□□ -1.99
STH1	YIL126W	ESL2	P36168	1195 aa		2.64	□□□□□ -1.99
STH1	YIL126W	YGR130C	P53278	816 aa		2.64	□□□□□ -1.99
STH1	YIL126W	SUB1	P54000	292 aa	Known RBP	2.64	□□□□□ -1.99
STH1	YIL126W	YOL036W	Q08206	761 aa		2.64	□□□□□ -1.99
STH1	YIL126W	PRP45	P28004	379 aa	Predicted RBP	2.63	□□□□□ -1.99
STH1	YIL126W	NMD2	P38798	1089 aa	Known RBP	2.63	□□□□□ -1.99
STH1	YIL126W	PSK1	P31374	1356 aa		2.63	□□□□□ -1.99
STH1	YIL126W	WHI3	P34761	661 aa	Known RBP	2.63	□□□□□ -1.99
STH1	YIL126W	YAP5	P40574	245 aa		2.63	□□□□□ -1.99
STH1	YIL126W	ALD4	P46367	519 aa	Known RBP	2.63	□□□□□ -1.99
STH1	YIL126W	ATG1	P53104	897 aa		2.63	□□□□□ -1.99
STH1	YIL126W	RRT6	P53117	311 aa	Predicted RBP	2.63	□□□□□ -1.99
STH1	YIL126W	CWC15	Q03772	175 aa	Known RBP	2.63	□□□□□ -1.99
STH1	YIL126W	YOR1	P53049	1477 aa		2.63	□□□□□ -1.99
STH1	YIL126W	FKH1	P40466	484 aa		2.63	□□□□□ -1.99
STH1	YIL126W	AOS1	Q06624	347 aa		2.63	□□□□□ -1.99
STH1	YIL126W	POL1	P13382	1468 aa		2.63	□□□□□ -1.99
STH1	YIL126W	SQS1	P53866	767 aa	Known RBP	2.63	□□□□□ -1.99
STH1	YIL126W	YOR238W	Q08634	303 aa		2.63	□□□□□ -1.99
STH1	YIL126W	TPM1	P17536	199 aa	Known RBP	2.62	□□□□□ -1.99
STH1	YIL126W	BUD31	P25337	157 aa	Predicted RBP	2.62	□□□□□ -1.99
STH1	YIL126W	GRX1	P25373	110 aa	Known RBP	2.62	□□□□□ -1.99
STH1	YIL126W	MSH4	P40965	878 aa	Predicted RBP	2.62	□□□□□ -1.99
STH1	YIL126W	PAP2	P53632	584 aa	Known RBP	2.62	□□□□□ -1.99
STH1	YIL126W	TY3B-G	Q99315	1547 aa		2.62	□□□□□ -1.99
STH1	YIL126W	ERG12	P07277	443 aa		2.62	□□□□□ -1.99
STH1	YIL126W	SNU71	P53207	620 aa	Known RBP	2.62	□□□□□ -1.99
STH1	YIL126W	FMP30	Q02883	468 aa		2.62	□□□□□ -1.99
STH1	YIL126W	YDL129W	Q07555	291 aa		2.62	□□□□□ -1.99
STH1	YIL126W	SPP41	P38904	1435 aa		2.62	□□□□□ -1.99
STH1	YIL126W	UTP22	P53254	1237 aa	Predicted RBP	2.62	□□□□□ -1.99
STH1	YIL126W	SNQ2	P32568	1501 aa	Known RBP	2.61	□□□□□ -1.99
STH1	YIL126W	STU1	P38198	1513 aa		2.61	□□□□□ -1.99
STH1	YIL126W	KEX1	P09620	729 aa		2.61	□□□□□ -1.99
STH1	YIL126W	KAR2	P16474	682 aa	Known RBP	2.61	□□□□□ -1.99
STH1	YIL126W	SDH2	P21801	266 aa		2.61	□□□□□ -1.99
STH1	YIL126W	TOA1	P32773	286 aa		2.61	□□□□□ -1.99
STH1	YIL126W	DSN1	P40568	576 aa		2.61	□□□□□ -1.99
STH1	YIL126W	FET4	P40988	552 aa		2.61	□□□□□ -1.99
STH1	YIL126W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
STH1	YIL126W	FPK1	P53739	893 aa		2.61	□□□□□ -1.99
STH1	YIL126W	TY3A-G	Q12173	290 aa		2.61	□□□□□ -1.99
STH1	YIL126W	TY3A-I	Q99219	290 aa		2.61	□□□□□ -1.99
STH1	YIL126W	IQG1	Q12280	1495 aa		2.61	□□□□□ -1.99
STH1	YIL126W	SMY2	P32909	740 aa	Known RBP	2.61	□□□□□ -1.99
STH1	YIL126W	YJL007C	P47080	104 aa		2.61	□□□□□ -1.99
STH1	YIL126W	MST1	P07236	462 aa		2.61	□□□□□ -1.99
STH1	YIL126W	YKL133C	P36066	463 aa		2.61	□□□□□ -1.99
STH1	YIL126W	PES4	P39684	611 aa		2.61	□□□□□ -1.99
STH1	YIL126W	VAB2	P40003	282 aa		2.61	□□□□□ -1.99
STH1	YIL126W	RAD26	P40352	1085 aa		2.61	□□□□□ -1.99
STH1	YIL126W	JIP4	Q03361	876 aa		2.61	□□□□□ -1.99
STH1	YIL126W	NOP53	Q12080	455 aa	Known RBP	2.61	□□□□□ -1.99
STH1	YIL126W	RLF2	Q12495	606 aa		2.61	□□□□□ -1.99
STH1	YIL126W	PDR11	P40550	1411 aa		2.6	□□□□□ -1.99
STH1	YIL126W	RPC31	P17890	251 aa		2.6	□□□□□ -1.99
STH1	YIL126W	MAC1	P35192	417 aa		2.6	□□□□□ -1.99
STH1	YIL126W	GPT2	P36148	743 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms