RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	TPD3	P31383	635 aa		5.71	□□□□□ -1.5
VHR1	YIL056W	GUT2	P32191	649 aa		5.71	□□□□□ -1.5
VHR1	YIL056W	YPP1	P46951	817 aa		5.7	□□□□□ -1.5
VHR1	YIL056W	STE20	Q03497	939 aa	Known RBP	5.7	□□□□□ -1.5
VHR1	YIL056W	FIG4	P42837	879 aa		5.7	□□□□□ -1.5
VHR1	YIL056W	ISF1	P32488	338 aa		5.69	□□□□□ -1.5
VHR1	YIL056W	ENO2	P00925	437 aa	Known RBP	5.68	□□□□□ -1.5
VHR1	YIL056W	VAC17	P25591	423 aa		5.68	□□□□□ -1.5
VHR1	YIL056W	EMP47	P43555	445 aa		5.68	□□□□□ -1.5
VHR1	YIL056W	ENV9	Q08651	330 aa		5.68	□□□□□ -1.5
VHR1	YIL056W	MCM16	Q12262	181 aa		5.68	□□□□□ -1.5
VHR1	YIL056W	SUP45	P12385	437 aa	Known RBP	5.66	□□□□□ -1.5
VHR1	YIL056W	HED1	Q03937	162 aa		5.66	□□□□□ -1.5
VHR1	YIL056W	ATG3	P40344	310 aa		5.65	□□□□□ -1.51
VHR1	YIL056W	ITT1	Q04638	464 aa		5.65	□□□□□ -1.51
VHR1	YIL056W	APP1	P53933	587 aa		5.64	□□□□□ -1.51
VHR1	YIL056W	CLA4	P48562	842 aa		5.64	□□□□□ -1.51
VHR1	YIL056W	HST3	P53687	447 aa		5.64	□□□□□ -1.51
VHR1	YIL056W	ENO1	P00924	437 aa	Known RBP	5.63	□□□□□ -1.51
VHR1	YIL056W	MRX12	P47084	519 aa		5.62	□□□□□ -1.51
VHR1	YIL056W	FRA1	Q07825	749 aa		5.62	□□□□□ -1.51
VHR1	YIL056W	AIR1	P40507	360 aa	Known RBP	5.61	□□□□□ -1.51
VHR1	YIL056W	CDC4	P07834	779 aa		5.6	□□□□□ -1.51
VHR1	YIL056W	KTR7	P40504	517 aa		5.6	□□□□□ -1.51
VHR1	YIL056W	RIM21	P48565	533 aa		5.6	□□□□□ -1.51
VHR1	YIL056W	UGA3	P26370	528 aa		5.6	□□□□□ -1.51
VHR1	YIL056W	SOH1	P38633	127 aa		5.6	□□□□□ -1.51
VHR1	YIL056W	ATG20	Q07528	640 aa		5.6	□□□□□ -1.51
VHR1	YIL056W	MKS1	P34072	584 aa		5.59	□□□□□ -1.51
VHR1	YIL056W	YPR084W	Q06821	456 aa		5.59	□□□□□ -1.51
VHR1	YIL056W	CPS1	P27614	576 aa		5.58	□□□□□ -1.52
VHR1	YIL056W	ASH1	P34233	588 aa		5.58	□□□□□ -1.52
VHR1	YIL056W	TRK1	P12685	1235 aa		5.58	□□□□□ -1.52
VHR1	YIL056W	SSA4	P22202	642 aa	Known RBP	5.58	□□□□□ -1.52
VHR1	YIL056W	SIS2	P36024	562 aa		5.58	□□□□□ -1.52
VHR1	YIL056W	ISR1	Q06098	443 aa	Known RBP	5.58	□□□□□ -1.52
VHR1	YIL056W	SRF1	Q12516	437 aa		5.58	□□□□□ -1.52
VHR1	YIL056W	MET32	Q12041	191 aa		5.57	□□□□□ -1.52
VHR1	YIL056W	EMW1	P42842	904 aa	Known RBP	5.56	□□□□□ -1.52
VHR1	YIL056W	MRX10	Q05648	414 aa		5.56	□□□□□ -1.52
VHR1	YIL056W	RPP2B	P02400	110 aa	Known RBP	5.55	□□□□□ -1.52
VHR1	YIL056W	DAT1	P13483	248 aa	Known RBP	5.55	□□□□□ -1.52
VHR1	YIL056W	TTI1	P36097	1038 aa		5.55	□□□□□ -1.52
VHR1	YIL056W	DFG5	Q05031	458 aa		5.55	□□□□□ -1.52
VHR1	YIL056W	BDS1	Q08347	646 aa		5.55	□□□□□ -1.52
VHR1	YIL056W	GCR2	Q01722	534 aa		5.54	□□□□□ -1.52
VHR1	YIL056W	MRT4	P33201	236 aa	Known RBP	5.54	□□□□□ -1.52
VHR1	YIL056W	MIP1	P15801	1254 aa		5.53	□□□□□ -1.52
VHR1	YIL056W	AFT1	P22149	690 aa		5.53	□□□□□ -1.52
VHR1	YIL056W	TBS1	P38114	1094 aa		5.53	□□□□□ -1.52
VHR1	YIL056W	UTP13	Q05946	817 aa	Known RBP	5.53	□□□□□ -1.52
VHR1	YIL056W	FBP26	P32604	452 aa		5.52	□□□□□ -1.53
VHR1	YIL056W	UTR2	P32623	467 aa		5.52	□□□□□ -1.53
VHR1	YIL056W	DLD3	P39976	496 aa	Known RBP	5.52	□□□□□ -1.53
VHR1	YIL056W	RTT106	P40161	455 aa		5.52	□□□□□ -1.53
VHR1	YIL056W	RDS2	P19541	446 aa	Known RBP	5.51	□□□□□ -1.53
VHR1	YIL056W	YBL086C	P38177	466 aa		5.51	□□□□□ -1.53
VHR1	YIL056W	ISU1	Q03020	165 aa		5.51	□□□□□ -1.53
VHR1	YIL056W	ARG82	P07250	355 aa		5.5	□□□□□ -1.53
VHR1	YIL056W	YFL034W	P43564	1073 aa		5.5	□□□□□ -1.53
VHR1	YIL056W	ECM23	Q02710	187 aa		5.5	□□□□□ -1.53
VHR1	YIL056W	TGL4	P36165	910 aa		5.5	□□□□□ -1.53
VHR1	YIL056W	BRE2	P43132	505 aa		5.5	□□□□□ -1.53
VHR1	YIL056W	MSB3	P48566	633 aa	Predicted RBP	5.5	□□□□□ -1.53
VHR1	YIL056W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
VHR1	YIL056W	PDI1	P17967	522 aa	Known RBP	5.49	□□□□□ -1.53
VHR1	YIL056W	YJR115W	P47152	169 aa		5.49	□□□□□ -1.53
VHR1	YIL056W	APL6	P46682	809 aa		5.48	□□□□□ -1.53
VHR1	YIL056W	HDA3	Q06623	655 aa		5.48	□□□□□ -1.53
VHR1	YIL056W	PEP12	P32854	288 aa		5.48	□□□□□ -1.53
VHR1	YIL056W	HAL5	P38970	855 aa	Known RBP	5.48	□□□□□ -1.53
VHR1	YIL056W	RPL34A	P87262	121 aa	Predicted RBP	5.48	□□□□□ -1.53
VHR1	YIL056W	AIM9	P40053	627 aa	Known RBP	5.47	□□□□□ -1.53
VHR1	YIL056W	PTK2	P47116	818 aa	Known RBP	5.47	□□□□□ -1.53
VHR1	YIL056W	GAL2	P13181	574 aa		5.46	□□□□□ -1.53
VHR1	YIL056W	HAP4	P14064	554 aa		5.46	□□□□□ -1.53
VHR1	YIL056W	PHO87	P25360	923 aa		5.46	□□□□□ -1.53
VHR1	YIL056W	UBX7	P38349	436 aa		5.46	□□□□□ -1.53
VHR1	YIL056W	SRC1	Q03707	834 aa		5.46	□□□□□ -1.53
VHR1	YIL056W	SUB2	Q07478	446 aa	Known RBP	5.46	□□□□□ -1.53
VHR1	YIL056W	STE6	P12866	1290 aa		5.46	□□□□□ -1.54
VHR1	YIL056W	TSC13	Q99190	310 aa		5.46	□□□□□ -1.54
VHR1	YIL056W	WTM2	Q12206	467 aa		5.45	□□□□□ -1.54
VHR1	YIL056W	NTH2	P35172	780 aa		5.44	□□□□□ -1.54
VHR1	YIL056W	ALA1	P40825	983 aa	Known RBP	5.44	□□□□□ -1.54
VHR1	YIL056W	AAD14	P42884	376 aa		5.44	□□□□□ -1.54
VHR1	YIL056W	PUP1	P25043	261 aa		5.44	□□□□□ -1.54
VHR1	YIL056W	UTP7	P40055	554 aa	Known RBP	5.44	□□□□□ -1.54
VHR1	YIL056W	YLR346C	Q06139	101 aa		5.44	□□□□□ -1.54
VHR1	YIL056W	SPT2	P06843	333 aa	Predicted RBP	5.43	□□□□□ -1.54
VHR1	YIL056W	SSA1	P10591	642 aa	Known RBP	5.43	□□□□□ -1.54
VHR1	YIL056W	ACS2	P52910	683 aa	Known RBP	5.43	□□□□□ -1.54
VHR1	YIL056W	DLD1	P32891	587 aa		5.42	□□□□□ -1.54
VHR1	YIL056W	LSC2	P53312	427 aa		5.42	□□□□□ -1.54
VHR1	YIL056W	RPS6A	P0CX37	236 aa	Known RBP	5.42	□□□□□ -1.54
VHR1	YIL056W	RPS6B	P0CX38	236 aa	Predicted RBP	5.42	□□□□□ -1.54
VHR1	YIL056W	NUP85	P46673	744 aa		5.42	□□□□□ -1.54
VHR1	YIL056W	YML083C	Q04526	418 aa		5.42	□□□□□ -1.54
VHR1	YIL056W	GAS4	Q08271	471 aa		5.42	□□□□□ -1.54
VHR1	YIL056W	VAN1	P23642	535 aa		5.41	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms