RNA–Protein interactions for RNA: YIL009W

FAA3, Transcript of Long chain fatty acyl-CoA synthetase, yeast

Gene FAA3, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAA3	YIL009W	BRF1	P29056	596 aa		5.49	□□□□□ -1.53
FAA3	YIL009W	MAL31	P38156	614 aa		5.49	□□□□□ -1.53
FAA3	YIL009W	HEM3	P28789	327 aa		5.48	□□□□□ -1.53
FAA3	YIL009W	PPH3	P32345	308 aa		5.48	□□□□□ -1.53
FAA3	YIL009W	RPN12	P32496	274 aa		5.48	□□□□□ -1.53
FAA3	YIL009W	SAS3	P34218	831 aa		5.48	□□□□□ -1.53
FAA3	YIL009W	SRP1	Q02821	542 aa	Known RBP	5.48	□□□□□ -1.53
FAA3	YIL009W	SSF2	Q12153	453 aa	Predicted RBP	5.48	□□□□□ -1.53
FAA3	YIL009W	SSB1	P11484	613 aa	Known RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	MRM1	P25270	412 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	RPC82	P32349	654 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	SSB2	P40150	613 aa	Known RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	CCM1	P48237	864 aa	Predicted RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	YOR389W	Q08912	624 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	LSP1	Q12230	341 aa	Known RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	RUD3	Q12234	484 aa	Known RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	SNU66	Q12420	587 aa	Predicted RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	MSH3	P25336	1018 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	EFB1	P32471	206 aa	Known RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	SLX5	P32828	619 aa	Known RBP	5.47	□□□□□ -1.53
FAA3	YIL009W	PEX5	P35056	612 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	RTG3	P38165	486 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	DSF2	P38213	736 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	GPI8	P49018	411 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	YOL057W	Q08225	711 aa		5.47	□□□□□ -1.53
FAA3	YIL009W	SUP35	P05453	685 aa	Known RBP	5.46	□□□□□ -1.53
FAA3	YIL009W	CDC31	P06704	161 aa	Known RBP	5.46	□□□□□ -1.53
FAA3	YIL009W	MAK11	P20484	414 aa	Known RBP	5.46	□□□□□ -1.53
FAA3	YIL009W	NFU1	P32860	256 aa		5.46	□□□□□ -1.53
FAA3	YIL009W	BNI4	P53858	892 aa		5.46	□□□□□ -1.53
FAA3	YIL009W	RRB1	Q04225	511 aa	Known RBP	5.46	□□□□□ -1.53
FAA3	YIL009W	SUB2	Q07478	446 aa	Known RBP	5.46	□□□□□ -1.53
FAA3	YIL009W	MAM3	Q12296	706 aa		5.46	□□□□□ -1.53
FAA3	YIL009W	MRF1	P30775	413 aa	Predicted RBP	5.46	□□□□□ -1.54
FAA3	YIL009W	TFG1	P41895	735 aa	Predicted RBP	5.46	□□□□□ -1.54
FAA3	YIL009W	EPS1	P40557	701 aa		5.45	□□□□□ -1.54
FAA3	YIL009W	YNL058C	P53947	316 aa		5.45	□□□□□ -1.54
FAA3	YIL009W	DNM1	P54861	757 aa		5.45	□□□□□ -1.54
FAA3	YIL009W	ERV41	Q04651	352 aa		5.45	□□□□□ -1.54
FAA3	YIL009W	PCL8	Q08966	492 aa		5.45	□□□□□ -1.54
FAA3	YIL009W	CYB2	P00175	591 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	PBS2	P08018	668 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	MAK16	P10962	306 aa	Predicted RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	SIC1	P38634	284 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	PPX1	P38698	397 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	YHR218W	P38899	603 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	CST6	P40535	587 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	SMC3	P47037	1230 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	ELA1	P53861	379 aa	Predicted RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	PHM6	Q05637	104 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	NOP14	Q99207	810 aa	Known RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	THR4	P16120	514 aa	Known RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	STM1	P39015	273 aa	Known RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	IES2	P40154	320 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	MEP1	P40260	492 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	RNH70	P53331	553 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	YNR021W	P53723	404 aa	Known RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	ITT1	Q04638	464 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	NFI1	Q12216	726 aa		5.44	□□□□□ -1.54
FAA3	YIL009W	TCB3	Q03640	1545 aa	Known RBP	5.44	□□□□□ -1.54
FAA3	YIL009W	PUF6	Q04373	656 aa	Known RBP	5.43	□□□□□ -1.54
FAA3	YIL009W	SWI6	P09959	803 aa		5.43	□□□□□ -1.54
FAA3	YIL009W	RCR1	P38212	213 aa		5.43	□□□□□ -1.54
FAA3	YIL009W	PES4	P39684	611 aa		5.43	□□□□□ -1.54
FAA3	YIL009W	YTA6	P40328	754 aa		5.43	□□□□□ -1.54
FAA3	YIL009W	GYP7	P48365	746 aa		5.43	□□□□□ -1.54
FAA3	YIL009W	RIX7	Q07844	837 aa	Known RBP	5.43	□□□□□ -1.54
FAA3	YIL009W	SRP54	P20424	541 aa	Known RBP	5.42	□□□□□ -1.54
FAA3	YIL009W	PPG1	P32838	368 aa		5.42	□□□□□ -1.54
FAA3	YIL009W	SEC6	P32844	805 aa		5.42	□□□□□ -1.54
FAA3	YIL009W	ARC19	P33204	171 aa	Known RBP	5.42	□□□□□ -1.54
FAA3	YIL009W	RTF1	P53064	558 aa		5.42	□□□□□ -1.54
FAA3	YIL009W	JJJ1	P53863	590 aa		5.42	□□□□□ -1.54
FAA3	YIL009W	SXM1	Q04175	944 aa	Known RBP	5.42	□□□□□ -1.54
FAA3	YIL009W	VMS1	Q04311	632 aa	Known RBP	5.42	□□□□□ -1.54
FAA3	YIL009W	NSE3	Q05541	303 aa		5.42	□□□□□ -1.54
FAA3	YIL009W	MPH3	P0CE00	602 aa		5.41	□□□□□ -1.54
FAA3	YIL009W	KDX1	P36005	433 aa		5.41	□□□□□ -1.54
FAA3	YIL009W	PAF1	P38351	445 aa		5.41	□□□□□ -1.54
FAA3	YIL009W	RTT106	P40161	455 aa		5.41	□□□□□ -1.54
FAA3	YIL009W	RRP9	Q06506	573 aa	Known RBP	5.41	□□□□□ -1.54
FAA3	YIL009W	APC2	Q12440	853 aa		5.41	□□□□□ -1.54
FAA3	YIL009W	BDF1	P35817	686 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	TPS3	P38426	1054 aa	Known RBP	5.4	□□□□□ -1.54
FAA3	YIL009W	ETP1	P38748	585 aa	Known RBP	5.4	□□□□□ -1.54
FAA3	YIL009W	TGL3	P40308	642 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	TIM54	P47045	478 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	ALD2	P47771	506 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	VTI1	Q04338	217 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	ARR1	Q06596	294 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	AVO1	Q08236	1176 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	YRM1	Q12340	786 aa		5.4	□□□□□ -1.54
FAA3	YIL009W	YEF3	P16521	1044 aa	Known RBP	5.39	□□□□□ -1.55
FAA3	YIL009W	KAR3	P17119	729 aa		5.39	□□□□□ -1.55
FAA3	YIL009W	BUD31	P25337	157 aa	Predicted RBP	5.39	□□□□□ -1.55
FAA3	YIL009W	NIP100	P33420	868 aa		5.39	□□□□□ -1.55
FAA3	YIL009W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
FAA3	YIL009W	CTR9	P89105	1077 aa		5.39	□□□□□ -1.55
FAA3	YIL009W	OYE2	Q03558	400 aa	Known RBP	5.39	□□□□□ -1.55
FAA3	YIL009W	PSR1	Q07800	427 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms