RNA–Protein interactions for RNA: YIL009W

FAA3, Transcript of Long chain fatty acyl-CoA synthetase, yeast

Gene FAA3, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAA3	YIL009W	DRS1	P32892	752 aa	Known RBP	8.53	□□□□□ -1.04
FAA3	YIL009W	RQC2	Q12532	1038 aa	Known RBP	8.17	□□□□□ -1.1
FAA3	YIL009W	MTC1	P47018	478 aa	Known RBP	8.04	□□□□□ -1.12
FAA3	YIL009W	TAF7	Q05021	590 aa		7.74	□□□□□ -1.17
FAA3	YIL009W	BFR2	Q06631	534 aa	Known RBP	7.61	□□□□□ -1.19
FAA3	YIL009W	TFA1	P36100	482 aa		7.5	□□□□□ -1.21
FAA3	YIL009W	FAP1	P53971	965 aa		7.26	□□□□□ -1.25
FAA3	YIL009W	URN1	Q06525	465 aa	Known RBP	7.14	□□□□□ -1.27
FAA3	YIL009W	AVT3	P36062	692 aa		7.12	□□□□□ -1.27
FAA3	YIL009W	DIP2	Q12220	943 aa	Predicted RBP	7.1	□□□□□ -1.27
FAA3	YIL009W	PRY3	P47033	881 aa		6.81	□□□□□ -1.32
FAA3	YIL009W	PRI1	P10363	409 aa		6.78	□□□□□ -1.32
FAA3	YIL009W	YRB30	P53107	440 aa	Predicted RBP	6.78	□□□□□ -1.32
FAA3	YIL009W	LEO1	P38439	464 aa		6.75	□□□□□ -1.33
FAA3	YIL009W	AIM44	Q99299	758 aa		6.75	□□□□□ -1.33
FAA3	YIL009W	SIS2	P36024	562 aa		6.73	□□□□□ -1.33
FAA3	YIL009W	AAD16	Q02895	342 aa		6.73	□□□□□ -1.33
FAA3	YIL009W	NAP1	P25293	417 aa	Known RBP	6.72	□□□□□ -1.33
FAA3	YIL009W	EBP2	P36049	427 aa	Known RBP	6.65	□□□□□ -1.35
FAA3	YIL009W	ISW2	Q08773	1120 aa		6.65	□□□□□ -1.35
FAA3	YIL009W	CAB3	P36076	571 aa		6.62	□□□□□ -1.35
FAA3	YIL009W	RPG1	P38249	964 aa	Known RBP	6.61	□□□□□ -1.35
FAA3	YIL009W	DMA1	P38823	416 aa		6.59	□□□□□ -1.35
FAA3	YIL009W	RSE1	Q04693	1361 aa	Known RBP	6.58	□□□□□ -1.36
FAA3	YIL009W	YFR016C	P43597	1233 aa	Known RBP	6.56	□□□□□ -1.36
FAA3	YIL009W	IOC4	Q04213	475 aa		6.55	□□□□□ -1.36
FAA3	YIL009W	RPS0B	P46654	252 aa	Known RBP	6.54	□□□□□ -1.36
FAA3	YIL009W	MNN4	P36044	1178 aa		6.52	□□□□□ -1.37
FAA3	YIL009W	YCK3	P39962	524 aa		6.45	□□□□□ -1.38
FAA3	YIL009W	KRI1	P42846	591 aa	Known RBP	6.43	□□□□□ -1.38
FAA3	YIL009W	TSR3	Q12094	313 aa	Known RBP	6.43	□□□□□ -1.38
FAA3	YIL009W	TOP1	P04786	769 aa		6.41	□□□□□ -1.38
FAA3	YIL009W	NOP2	P40991	618 aa	Known RBP	6.38	□□□□□ -1.39
FAA3	YIL009W	SNU71	P53207	620 aa	Known RBP	6.35	□□□□□ -1.39
FAA3	YIL009W	HAA1	Q12753	694 aa	Known RBP	6.35	□□□□□ -1.39
FAA3	YIL009W	IFH1	P39520	1085 aa		6.34	□□□□□ -1.4
FAA3	YIL009W	RPL17A	P05740	184 aa	Known RBP	6.27	□□□□□ -1.41
FAA3	YIL009W	RPL17B	P46990	184 aa	Known RBP	6.27	□□□□□ -1.41
FAA3	YIL009W	ORC1	P54784	914 aa	Predicted RBP	6.24	□□□□□ -1.41
FAA3	YIL009W	PTP3	P40048	928 aa		6.21	□□□□□ -1.42
FAA3	YIL009W	DEF1	P35732	738 aa	Known RBP	6.19	□□□□□ -1.42
FAA3	YIL009W	REB1	P21538	810 aa		6.19	□□□□□ -1.42
FAA3	YIL009W	LEU3	P08638	886 aa		6.18	□□□□□ -1.42
FAA3	YIL009W	MDG1	P53885	366 aa		6.18	□□□□□ -1.42
FAA3	YIL009W	CWC22	P53333	577 aa	Known RBP	6.15	□□□□□ -1.42
FAA3	YIL009W	SUB1	P54000	292 aa	Known RBP	6.14	□□□□□ -1.43
FAA3	YIL009W	MRPL32	P25348	183 aa		6.14	□□□□□ -1.43
FAA3	YIL009W	BRL1	P38770	471 aa		6.14	□□□□□ -1.43
FAA3	YIL009W	FPR3	P38911	411 aa	Known RBP	6.14	□□□□□ -1.43
FAA3	YIL009W	RLF2	Q12495	606 aa		6.11	□□□□□ -1.43
FAA3	YIL009W	VPS72	Q03388	795 aa		6.11	□□□□□ -1.43
FAA3	YIL009W	GIN4	Q12263	1142 aa		6.11	□□□□□ -1.43
FAA3	YIL009W	RIM101	P33400	625 aa		6.1	□□□□□ -1.43
FAA3	YIL009W	PLP2	Q12017	286 aa		6.09	□□□□□ -1.43
FAA3	YIL009W	SAS10	Q12136	610 aa	Predicted RBP	6.09	□□□□□ -1.43
FAA3	YIL009W	HSP82	P02829	709 aa	Known RBP	6.08	□□□□□ -1.44
FAA3	YIL009W	ASF1	P32447	279 aa		6.08	□□□□□ -1.44
FAA3	YIL009W	RLP24	Q07915	199 aa	Known RBP	6.08	□□□□□ -1.44
FAA3	YIL009W	PSH1	Q12161	406 aa		6.08	□□□□□ -1.44
FAA3	YIL009W	HIF1	Q12373	385 aa		6.08	□□□□□ -1.44
FAA3	YIL009W	SSP1	P38871	571 aa		6.08	□□□□□ -1.44
FAA3	YIL009W	DMA2	P53924	522 aa		6.08	□□□□□ -1.44
FAA3	YIL009W	RPS0A	P32905	252 aa	Known RBP	6.07	□□□□□ -1.44
FAA3	YIL009W	TOA1	P32773	286 aa		6.06	□□□□□ -1.44
FAA3	YIL009W	SPT21	P35209	758 aa		6.05	□□□□□ -1.44
FAA3	YIL009W	NUG1	P40010	520 aa	Known RBP	6.05	□□□□□ -1.44
FAA3	YIL009W	RPN1	P38764	993 aa	Known RBP	6.04	□□□□□ -1.44
FAA3	YIL009W	SWE1	P32944	819 aa		6.02	□□□□□ -1.45
FAA3	YIL009W	NOP53	Q12080	455 aa	Known RBP	5.98	□□□□□ -1.45
FAA3	YIL009W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.98	□□□□□ -1.45	not detected
FAA3	YIL009W	SPT2	P06843	333 aa	Predicted RBP	5.97	□□□□□ -1.45
FAA3	YIL009W	ENP1	P38333	483 aa	Known RBP	5.97	□□□□□ -1.45
FAA3	YIL009W	RIX1	P38883	763 aa	Predicted RBP	5.95	□□□□□ -1.46
FAA3	YIL009W	YPR148C	Q06523	435 aa		5.95	□□□□□ -1.46
FAA3	YIL009W	NOP7	P53261	605 aa	Known RBP	5.95	□□□□□ -1.46
FAA3	YIL009W	RTS3	P53289	263 aa		5.95	□□□□□ -1.46
FAA3	YIL009W	SPT16	P32558	1035 aa	Known RBP	5.94	□□□□□ -1.46
FAA3	YIL009W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
FAA3	YIL009W	OSW7	P43611	510 aa		5.94	□□□□□ -1.46
FAA3	YIL009W	MPP10	P47083	593 aa	Known RBP	5.94	□□□□□ -1.46
FAA3	YIL009W	ENV11	P53246	860 aa		5.94	□□□□□ -1.46
FAA3	YIL009W	QCR6	P00127	147 aa		5.94	□□□□□ -1.46
FAA3	YIL009W	ABP1	P15891	592 aa	Known RBP	5.94	□□□□□ -1.46
FAA3	YIL009W	BRN1	P38170	754 aa		5.94	□□□□□ -1.46
FAA3	YIL009W	TCB2	P48231	1178 aa		5.94	□□□□□ -1.46
FAA3	YIL009W	TLG1	Q03322	224 aa		5.94	□□□□□ -1.46
FAA3	YIL009W	NHA1	Q99271	985 aa		5.93	□□□□□ -1.46
FAA3	YIL009W	RNA1	P11745	407 aa	Known RBP	5.92	□□□□□ -1.46
FAA3	YIL009W	YIL055C	P40523	627 aa	Known RBP	5.9	□□□□□ -1.46
FAA3	YIL009W	YAH1	Q12184	172 aa	Known RBP	5.9	□□□□□ -1.46
FAA3	YIL009W	SGS1	P35187	1447 aa		5.9	□□□□□ -1.47
FAA3	YIL009W	OXP1	P28273	1286 aa		5.89	□□□□□ -1.47
FAA3	YIL009W	FUN12	P39730	1002 aa	Known RBP	5.89	□□□□□ -1.47
FAA3	YIL009W	YGL015C	P33199	130 aa		5.88	□□□□□ -1.47
FAA3	YIL009W	SSA1	P10591	642 aa	Known RBP	5.87	□□□□□ -1.47
FAA3	YIL009W	SSA2	P10592	639 aa	Known RBP	5.87	□□□□□ -1.47
FAA3	YIL009W	TIF4632	P39936	914 aa	Known RBP	5.87	□□□□□ -1.47
FAA3	YIL009W	TPO2	P53283	614 aa		5.87	□□□□□ -1.47
FAA3	YIL009W	YML020W	Q03722	664 aa		5.87	□□□□□ -1.47
FAA3	YIL009W	SPT7	P35177	1332 aa		5.87	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms