RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RIM21P48565 533 aa6.64□□□□□ -1.35
PRP18YGR006W MCM16Q12262 181 aa6.64□□□□□ -1.35
PRP18YGR006W MOD5P07884 428 aa6.63□□□□□ -1.35
PRP18YGR006W ENO1P00924 437 aaKnown RBP6.62□□□□□ -1.35
PRP18YGR006W GUT2P32191 649 aa6.62□□□□□ -1.35
PRP18YGR006W TTI1P36097 1038 aa6.62□□□□□ -1.35
PRP18YGR006W RRD1P40454 393 aaKnown RBP6.62□□□□□ -1.35
PRP18YGR006W MRX12P47084 519 aa6.62□□□□□ -1.35
PRP18YGR006W MRX10Q05648 414 aa6.62□□□□□ -1.35
PRP18YGR006W FIG4P42837 879 aa6.61□□□□□ -1.35
PRP18YGR006W CLA4P48562 842 aa6.61□□□□□ -1.35
PRP18YGR006W PUS5Q06244 254 aa6.61□□□□□ -1.35
PRP18YGR006W SUB2Q07478 446 aaKnown RBP6.61□□□□□ -1.35
PRP18YGR006W STE20Q03497 939 aaKnown RBP6.6□□□□□ -1.35
PRP18YGR006W SRC1Q03707 834 aa6.6□□□□□ -1.35
PRP18YGR006W CPS1P27614 576 aa6.59□□□□□ -1.35
PRP18YGR006W ATG3P40344 310 aa6.59□□□□□ -1.35
PRP18YGR006W FRA1Q07825 749 aa6.59□□□□□ -1.35
PRP18YGR006W SSA1P10591 642 aaKnown RBP6.58□□□□□ -1.36
PRP18YGR006W VAC17P25591 423 aa6.58□□□□□ -1.36
PRP18YGR006W AIR1P40507 360 aaKnown RBP6.58□□□□□ -1.36
PRP18YGR006W EMP47P43555 445 aa6.58□□□□□ -1.36
PRP18YGR006W YPR084WQ06821 456 aa6.57□□□□□ -1.36
PRP18YGR006W ENV9Q08651 330 aa6.57□□□□□ -1.36
PRP18YGR006W ISF1P32488 338 aa6.56□□□□□ -1.36
PRP18YGR006W TRK1P12685 1235 aa6.54□□□□□ -1.36
PRP18YGR006W KIP2P28743 706 aa6.54□□□□□ -1.36
PRP18YGR006W PEP12P32854 288 aa6.54□□□□□ -1.36
PRP18YGR006W RDS2P19541 446 aaKnown RBP6.53□□□□□ -1.36
PRP18YGR006W SYH1Q02875 849 aaKnown RBP6.53□□□□□ -1.36
PRP18YGR006W HED1Q03937 162 aa6.53□□□□□ -1.36
PRP18YGR006W UTP13Q05946 817 aaKnown RBP6.53□□□□□ -1.36
PRP18YGR006W IXR1P33417 597 aa6.52□□□□□ -1.37
PRP18YGR006W TGL4P36165 910 aa6.52□□□□□ -1.37
PRP18YGR006W GEF1P37020 779 aa6.52□□□□□ -1.37
PRP18YGR006W APL6P46682 809 aa6.51□□□□□ -1.37
PRP18YGR006W PUP1P25043 261 aa6.5□□□□□ -1.37
PRP18YGR006W CDC4P07834 779 aa6.49□□□□□ -1.37
PRP18YGR006W NOB1Q08444 459 aaKnown RBP6.49□□□□□ -1.37
PRP18YGR006W SOH1P38633 127 aa6.48□□□□□ -1.37
PRP18YGR006W KTR7P40504 517 aa6.48□□□□□ -1.37
PRP18YGR006W RPL34AP87262 121 aaPredicted RBP6.48□□□□□ -1.37
PRP18YGR006W MET32Q12041 191 aa6.48□□□□□ -1.37
PRP18YGR006W GAL2P13181 574 aa6.46□□□□□ -1.38
PRP18YGR006W EMW1P42842 904 aaKnown RBP6.46□□□□□ -1.38
PRP18YGR006W ITT1Q04638 464 aa6.46□□□□□ -1.38
PRP18YGR006W ATG20Q07528 640 aa6.46□□□□□ -1.38
PRP18YGR006W ECM23Q02710 187 aa6.45□□□□□ -1.38
PRP18YGR006W PHO87P25360 923 aa6.44□□□□□ -1.38
PRP18YGR006W HST3P53687 447 aa6.44□□□□□ -1.38
PRP18YGR006W YML083CQ04526 418 aa6.44□□□□□ -1.38
PRP18YGR006W ISR1Q06098 443 aaKnown RBP6.44□□□□□ -1.38
PRP18YGR006W HAP4P14064 554 aa6.43□□□□□ -1.38
PRP18YGR006W YFL034WP43564 1073 aa6.43□□□□□ -1.38
PRP18YGR006W APP1P53933 587 aa6.43□□□□□ -1.38
PRP18YGR006W MRT4P33201 236 aaKnown RBP6.42□□□□□ -1.38
PRP18YGR006W ASH1P34233 588 aa6.42□□□□□ -1.38
PRP18YGR006W BRE2P43132 505 aa6.42□□□□□ -1.38
PRP18YGR006W TSC13Q99190 310 aa6.42□□□□□ -1.38
PRP18YGR006W RPP2BP02400 110 aaKnown RBP6.41□□□□□ -1.38
PRP18YGR006W MKS1P34072 584 aa6.41□□□□□ -1.38
PRP18YGR006W AFT1P22149 690 aa6.4□□□□□ -1.38
PRP18YGR006W CDC3P32457 520 aaKnown RBP6.4□□□□□ -1.38
PRP18YGR006W FBP26P32604 452 aa6.4□□□□□ -1.38
PRP18YGR006W UBX7P38349 436 aa6.4□□□□□ -1.38
PRP18YGR006W HAL5P38970 855 aaKnown RBP6.4□□□□□ -1.38
PRP18YGR006W RTT106P40161 455 aa6.4□□□□□ -1.38
PRP18YGR006W GAS4Q08271 471 aa6.4□□□□□ -1.38
PRP18YGR006W ACS2P52910 683 aaKnown RBP6.39□□□□□ -1.39
PRP18YGR006W HDA3Q06623 655 aa6.39□□□□□ -1.39
PRP18YGR006W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
PRP18YGR006W MIP1P15801 1254 aa6.38□□□□□ -1.39
PRP18YGR006W AIM9P40053 627 aaKnown RBP6.38□□□□□ -1.39
PRP18YGR006W SLX8P40072 274 aa6.38□□□□□ -1.39
PRP18YGR006W ISU1Q03020 165 aa6.38□□□□□ -1.39
PRP18YGR006W SPT2P06843 333 aaPredicted RBP6.37□□□□□ -1.39
PRP18YGR006W PDI1P17967 522 aaKnown RBP6.37□□□□□ -1.39
PRP18YGR006W UGA3P26370 528 aa6.37□□□□□ -1.39
PRP18YGR006W UTR2P32623 467 aa6.37□□□□□ -1.39
PRP18YGR006W YBL086CP38177 466 aa6.37□□□□□ -1.39
PRP18YGR006W GCR2Q01722 534 aa6.37□□□□□ -1.39
PRP18YGR006W PUF6Q04373 656 aaKnown RBP6.37□□□□□ -1.39
PRP18YGR006W STE6P12866 1290 aa6.35□□□□□ -1.39
PRP18YGR006W TBS1P38114 1094 aa6.35□□□□□ -1.39
PRP18YGR006W MSB3P48566 633 aaPredicted RBP6.35□□□□□ -1.39
PRP18YGR006W ROM1P53046 1155 aa6.35□□□□□ -1.39
PRP18YGR006W BDS1Q08347 646 aa6.35□□□□□ -1.39
PRP18YGR006W DAT1P13483 248 aaKnown RBP6.34□□□□□ -1.39
PRP18YGR006W VAN1P23642 535 aa6.34□□□□□ -1.39
PRP18YGR006W YJR115WP47152 169 aa6.34□□□□□ -1.39
PRP18YGR006W DFG5Q05031 458 aa6.34□□□□□ -1.39
PRP18YGR006W NTH2P35172 780 aa6.33□□□□□ -1.4
PRP18YGR006W TRS33Q99394 268 aa6.33□□□□□ -1.4
PRP18YGR006W RPS6AP0CX37 236 aaKnown RBP6.32□□□□□ -1.4
PRP18YGR006W RPS6BP0CX38 236 aaPredicted RBP6.32□□□□□ -1.4
PRP18YGR006W YML020WQ03722 664 aa6.32□□□□□ -1.4
PRP18YGR006W CWC15Q03772 175 aaKnown RBP6.32□□□□□ -1.4
PRP18YGR006W CYT1P07143 309 aa6.31□□□□□ -1.4
PRP18YGR006W SWI5P08153 709 aa6.31□□□□□ -1.4
PRP18YGR006W UBP1P25037 809 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms