RNA–Protein interactions for RNA: YGL085W

LCL3, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL3, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL3YGL085W MSB4Q12317 492 aa8.83□□□□□ -1
LCL3YGL085W OSM1P21375 501 aaKnown RBP8.8□□□□□ -1
LCL3YGL085W RPG1P38249 964 aaKnown RBP8.8□□□□□ -1
LCL3YGL085W ALD3P54114 506 aa8.8□□□□□ -1
LCL3YGL085W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
LCL3YGL085W SSA1P10591 642 aaKnown RBP8.78□□□□□ -1
LCL3YGL085W RAD4P14736 754 aa8.78□□□□□ -1
LCL3YGL085W GRX1P25373 110 aaKnown RBP8.78□□□□□ -1
LCL3YGL085W DSD1P53095 428 aa8.77□□□□□ -1.01
LCL3YGL085W GRE2Q12068 342 aaKnown RBP8.77□□□□□ -1.01
LCL3YGL085W BUG1Q12191 341 aa8.77□□□□□ -1.01
LCL3YGL085W NUP145P49687 1317 aa8.77□□□□□ -1.01
LCL3YGL085W HSP104P31539 908 aaKnown RBP8.76□□□□□ -1.01
LCL3YGL085W CTF4Q01454 927 aa8.76□□□□□ -1.01
LCL3YGL085W TRK1P12685 1235 aa8.75□□□□□ -1.01
LCL3YGL085W NST1P53935 1240 aa8.75□□□□□ -1.01
LCL3YGL085W AKL1P38080 1108 aaKnown RBP8.74□□□□□ -1.01
LCL3YGL085W YBP2P53169 641 aa8.74□□□□□ -1.01
LCL3YGL085W UTP22P53254 1237 aaPredicted RBP8.74□□□□□ -1.01
LCL3YGL085W PAP2P53632 584 aaKnown RBP8.74□□□□□ -1.01
LCL3YGL085W TOS1P38288 455 aa8.73□□□□□ -1.01
LCL3YGL085W UTP10P42945 1769 aaKnown RBP8.72□□□□□ -1.01
LCL3YGL085W TUM1Q08686 304 aaKnown RBP8.71□□□□□ -1.02
LCL3YGL085W AOS1Q06624 347 aa8.7□□□□□ -1.02
LCL3YGL085W SAP155P43612 1002 aa8.68□□□□□ -1.02
LCL3YGL085W EAF6P47128 113 aa8.68□□□□□ -1.02
LCL3YGL085W HPC2Q01448 625 aa8.68□□□□□ -1.02
LCL3YGL085W RMT2Q03305 412 aa8.67□□□□□ -1.02
LCL3YGL085W KCC4P25389 1037 aa8.66□□□□□ -1.02
LCL3YGL085W NTH2P35172 780 aa8.66□□□□□ -1.02
LCL3YGL085W RRP46P53256 223 aaPredicted RBP8.66□□□□□ -1.02
LCL3YGL085W RIX7Q07844 837 aaKnown RBP8.66□□□□□ -1.02
LCL3YGL085W DIP2Q12220 943 aaPredicted RBP8.66□□□□□ -1.02
LCL3YGL085W NYV1Q12255 253 aa8.66□□□□□ -1.02
LCL3YGL085W MSN5P52918 1224 aa8.65□□□□□ -1.02
LCL3YGL085W PSD2P53037 1138 aaKnown RBP8.65□□□□□ -1.02
LCL3YGL085W ALE1Q08548 619 aa8.64□□□□□ -1.03
LCL3YGL085W TEA1P47988 759 aa8.63□□□□□ -1.03
LCL3YGL085W MDG1P53885 366 aa8.63□□□□□ -1.03
LCL3YGL085W NOP53Q12080 455 aaKnown RBP8.63□□□□□ -1.03
LCL3YGL085W CTT1P06115 562 aa8.62□□□□□ -1.03
LCL3YGL085W UGA3P26370 528 aa8.61□□□□□ -1.03
LCL3YGL085W YKL222CP35995 705 aa8.61□□□□□ -1.03
LCL3YGL085W ERT1P38140 529 aa8.61□□□□□ -1.03
LCL3YGL085W RRT14P40470 206 aa8.61□□□□□ -1.03
LCL3YGL085W BUD27P43573 796 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
LCL3YGL085W PHM7Q12252 991 aa8.61□□□□□ -1.03
LCL3YGL085W YER156CP40093 338 aaKnown RBP8.6□□□□□ -1.03
LCL3YGL085W YNL050CP53952 270 aa8.6□□□□□ -1.03
LCL3YGL085W KIN4Q01919 800 aa8.6□□□□□ -1.03
LCL3YGL085W IOC4Q04213 475 aa8.59□□□□□ -1.03
LCL3YGL085W CTI6Q08923 506 aa8.59□□□□□ -1.03
LCL3YGL085W RTR1P40084 226 aaPredicted RBP8.58□□□□□ -1.04
LCL3YGL085W YFR016CP43597 1233 aaKnown RBP8.58□□□□□ -1.04
LCL3YGL085W CWH41P53008 833 aa8.58□□□□□ -1.04
LCL3YGL085W SSP2Q08646 371 aa8.58□□□□□ -1.04
LCL3YGL085W LYS2P07702 1392 aa8.58□□□□□ -1.04
LCL3YGL085W LPD1P09624 499 aaKnown RBP8.57□□□□□ -1.04
LCL3YGL085W PRD1P25375 712 aa8.57□□□□□ -1.04
LCL3YGL085W SER1P33330 395 aaKnown RBP8.57□□□□□ -1.04
LCL3YGL085W NSE3Q05541 303 aa8.57□□□□□ -1.04
LCL3YGL085W PMD1P32634 1753 aa8.56□□□□□ -1.04
LCL3YGL085W PFF1P38244 976 aa8.56□□□□□ -1.04
LCL3YGL085W YGL082WP53155 381 aa8.55□□□□□ -1.04
LCL3YGL085W RAT1Q02792 1006 aaKnown RBP8.55□□□□□ -1.04
LCL3YGL085W TSR3Q12094 313 aaKnown RBP8.55□□□□□ -1.04
LCL3YGL085W ARG8P18544 423 aa8.53□□□□□ -1.04
LCL3YGL085W SMY1P32364 656 aaKnown RBP8.53□□□□□ -1.04
LCL3YGL085W MAM1P40065 302 aa8.53□□□□□ -1.04
LCL3YGL085W ZDS1P50111 915 aaKnown RBP8.53□□□□□ -1.04
LCL3YGL085W SQS1P53866 767 aaKnown RBP8.53□□□□□ -1.04
LCL3YGL085W THI22Q06490 572 aa8.52□□□□□ -1.05
LCL3YGL085W COQ4O13525 335 aa8.51□□□□□ -1.05
LCL3YGL085W DCD1P06773 312 aa8.51□□□□□ -1.05
LCL3YGL085W DIB1Q06819 143 aaPredicted RBP8.51□□□□□ -1.05
LCL3YGL085W BDF2Q07442 638 aa8.51□□□□□ -1.05
LCL3YGL085W APL2P36000 726 aaPredicted RBP8.5□□□□□ -1.05
LCL3YGL085W ERO1Q03103 563 aa8.5□□□□□ -1.05
LCL3YGL085W IRC3Q06683 689 aa8.5□□□□□ -1.05
LCL3YGL085W BMS1Q08965 1183 aaKnown RBP8.5□□□□□ -1.05
LCL3YGL085W YPR204WQ08995 1032 aa8.5□□□□□ -1.05
LCL3YGL085W MPP10P47083 593 aaKnown RBP8.49□□□□□ -1.05
LCL3YGL085W ZDS2P54786 942 aa8.49□□□□□ -1.05
LCL3YGL085W RTT109Q07794 436 aa8.49□□□□□ -1.05
LCL3YGL085W FPK1P53739 893 aa8.48□□□□□ -1.05
LCL3YGL085W SSK22P25390 1331 aaPredicted RBP8.48□□□□□ -1.05
LCL3YGL085W SIT4P20604 311 aa8.47□□□□□ -1.05
LCL3YGL085W YBR287WP38355 427 aa8.47□□□□□ -1.05
LCL3YGL085W GYP7P48365 746 aa8.47□□□□□ -1.05
LCL3YGL085W VPS64Q03944 604 aa8.47□□□□□ -1.05
LCL3YGL085W CAF20P12962 161 aaKnown RBP8.46□□□□□ -1.06
LCL3YGL085W HEF3P53978 1044 aaKnown RBP8.46□□□□□ -1.06
LCL3YGL085W YOL057WQ08225 711 aa8.46□□□□□ -1.06
LCL3YGL085W HAT1Q12341 374 aa8.46□□□□□ -1.06
LCL3YGL085W TOP1P04786 769 aa8.45□□□□□ -1.06
LCL3YGL085W RPS9BP05755 195 aaKnown RBP8.45□□□□□ -1.06
LCL3YGL085W ICL1P28240 557 aaPredicted RBP8.45□□□□□ -1.06
LCL3YGL085W UBP16Q02863 499 aa8.45□□□□□ -1.06
LCL3YGL085W YDL144CQ07589 356 aa8.45□□□□□ -1.06
LCL3YGL085W HKR1P41809 1802 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms