RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C YJL007CP47080 104 aa6.71□□□□□ -1.34
PGD1YGL025C SPT5P27692 1063 aaKnown RBP6.7□□□□□ -1.34
PGD1YGL025C ITT1Q04638 464 aa6.7□□□□□ -1.34
PGD1YGL025C SUP45P12385 437 aaKnown RBP6.69□□□□□ -1.34
PGD1YGL025C BIM1P40013 344 aa6.69□□□□□ -1.34
PGD1YGL025C MRT4P33201 236 aaKnown RBP6.67□□□□□ -1.34
PGD1YGL025C ATG32P40458 529 aa6.67□□□□□ -1.34
PGD1YGL025C YNL108CP53929 270 aa6.67□□□□□ -1.34
PGD1YGL025C GUT2P32191 649 aa6.66□□□□□ -1.34
PGD1YGL025C ENO2P00925 437 aaKnown RBP6.65□□□□□ -1.34
PGD1YGL025C ASH1P34233 588 aa6.65□□□□□ -1.34
PGD1YGL025C FRA1Q07825 749 aa6.65□□□□□ -1.34
PGD1YGL025C MCM16Q12262 181 aa6.65□□□□□ -1.34
PGD1YGL025C AFT1P22149 690 aa6.64□□□□□ -1.35
PGD1YGL025C EMW1P42842 904 aaKnown RBP6.64□□□□□ -1.35
PGD1YGL025C ISF1P32488 338 aa6.63□□□□□ -1.35
PGD1YGL025C EMP47P43555 445 aa6.63□□□□□ -1.35
PGD1YGL025C APP1P53933 587 aa6.63□□□□□ -1.35
PGD1YGL025C STE20Q03497 939 aaKnown RBP6.63□□□□□ -1.35
PGD1YGL025C TIF1P10081 395 aaKnown RBP6.62□□□□□ -1.35
PGD1YGL025C HST3P53687 447 aa6.61□□□□□ -1.35
PGD1YGL025C YBL086CP38177 466 aa6.6□□□□□ -1.35
PGD1YGL025C APL6P46682 809 aa6.6□□□□□ -1.35
PGD1YGL025C RIM21P48565 533 aa6.6□□□□□ -1.35
PGD1YGL025C BRE2P43132 505 aa6.59□□□□□ -1.35
PGD1YGL025C MRX12P47084 519 aa6.59□□□□□ -1.35
PGD1YGL025C YPP1P46951 817 aa6.58□□□□□ -1.36
PGD1YGL025C MSB3P48566 633 aaPredicted RBP6.58□□□□□ -1.36
PGD1YGL025C MRX10Q05648 414 aa6.58□□□□□ -1.36
PGD1YGL025C RTG2P32608 588 aaKnown RBP6.57□□□□□ -1.36
PGD1YGL025C YJR115WP47152 169 aa6.57□□□□□ -1.36
PGD1YGL025C ENO1P00924 437 aaKnown RBP6.56□□□□□ -1.36
PGD1YGL025C RDS2P19541 446 aaKnown RBP6.56□□□□□ -1.36
PGD1YGL025C RPL34BP40525 121 aaKnown RBP6.56□□□□□ -1.36
PGD1YGL025C UGA3P26370 528 aa6.55□□□□□ -1.36
PGD1YGL025C MKS1P34072 584 aa6.55□□□□□ -1.36
PGD1YGL025C RTT106P40161 455 aa6.55□□□□□ -1.36
PGD1YGL025C ATG20Q07528 640 aa6.55□□□□□ -1.36
PGD1YGL025C FBP26P32604 452 aa6.54□□□□□ -1.36
PGD1YGL025C GCR2Q01722 534 aa6.54□□□□□ -1.36
PGD1YGL025C DFG5Q05031 458 aa6.54□□□□□ -1.36
PGD1YGL025C YPR204WQ08995 1032 aa6.54□□□□□ -1.36
PGD1YGL025C STE6P12866 1290 aa6.52□□□□□ -1.37
PGD1YGL025C SOH1P38633 127 aa6.52□□□□□ -1.37
PGD1YGL025C HAL5P38970 855 aaKnown RBP6.52□□□□□ -1.37
PGD1YGL025C PTK2P47116 818 aaKnown RBP6.52□□□□□ -1.37
PGD1YGL025C ISR1Q06098 443 aaKnown RBP6.52□□□□□ -1.37
PGD1YGL025C ISU1Q03020 165 aa6.51□□□□□ -1.37
PGD1YGL025C UTP13Q05946 817 aaKnown RBP6.51□□□□□ -1.37
PGD1YGL025C PEP12P32854 288 aa6.5□□□□□ -1.37
PGD1YGL025C ATG3P40344 310 aa6.5□□□□□ -1.37
PGD1YGL025C AAD14P42884 376 aa6.49□□□□□ -1.37
PGD1YGL025C ENV9Q08651 330 aa6.49□□□□□ -1.37
PGD1YGL025C BDS1Q08347 646 aa6.48□□□□□ -1.37
PGD1YGL025C SPT2P06843 333 aaPredicted RBP6.47□□□□□ -1.37
PGD1YGL025C ARG82P07250 355 aa6.47□□□□□ -1.37
PGD1YGL025C MET22P32179 357 aa6.47□□□□□ -1.37
PGD1YGL025C TTI1P36097 1038 aa6.47□□□□□ -1.37
PGD1YGL025C NUP85P46673 744 aa6.46□□□□□ -1.38
PGD1YGL025C SRF1Q12516 437 aa6.46□□□□□ -1.38
PGD1YGL025C HDA3Q06623 655 aa6.45□□□□□ -1.38
PGD1YGL025C RLF2Q12495 606 aa6.45□□□□□ -1.38
PGD1YGL025C WTM2Q12206 467 aa6.44□□□□□ -1.38
PGD1YGL025C UTR2P32623 467 aa6.43□□□□□ -1.38
PGD1YGL025C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
PGD1YGL025C MIP1P15801 1254 aa6.42□□□□□ -1.38
PGD1YGL025C DLD1P32891 587 aa6.42□□□□□ -1.38
PGD1YGL025C SIS2P36024 562 aa6.42□□□□□ -1.38
PGD1YGL025C LCB5Q06147 687 aaKnown RBP6.42□□□□□ -1.38
PGD1YGL025C DAT1P13483 248 aaKnown RBP6.41□□□□□ -1.38
PGD1YGL025C SLX8P40072 274 aa6.41□□□□□ -1.38
PGD1YGL025C KTR7P40504 517 aa6.41□□□□□ -1.38
PGD1YGL025C YJR098CP47139 656 aa6.41□□□□□ -1.38
PGD1YGL025C OPT2Q06593 877 aa6.41□□□□□ -1.38
PGD1YGL025C RPP2BP02400 110 aaKnown RBP6.4□□□□□ -1.38
PGD1YGL025C CPS1P27614 576 aa6.4□□□□□ -1.38
PGD1YGL025C LSC2P53312 427 aa6.4□□□□□ -1.38
PGD1YGL025C YDR444WQ04093 687 aa6.4□□□□□ -1.38
PGD1YGL025C TGL4P36165 910 aa6.39□□□□□ -1.39
PGD1YGL025C DLD3P39976 496 aaKnown RBP6.38□□□□□ -1.39
PGD1YGL025C YLR346CQ06139 101 aa6.38□□□□□ -1.39
PGD1YGL025C PDI1P17967 522 aaKnown RBP6.37□□□□□ -1.39
PGD1YGL025C GLY1P37303 387 aaKnown RBP6.37□□□□□ -1.39
PGD1YGL025C TBS1P38114 1094 aa6.37□□□□□ -1.39
PGD1YGL025C AIM9P40053 627 aaKnown RBP6.37□□□□□ -1.39
PGD1YGL025C TCB1Q12466 1186 aa6.37□□□□□ -1.39
PGD1YGL025C TSC13Q99190 310 aa6.37□□□□□ -1.39
PGD1YGL025C PHO87P25360 923 aa6.36□□□□□ -1.39
PGD1YGL025C GAR1P28007 205 aaKnown RBP6.36□□□□□ -1.39
PGD1YGL025C ACS2P52910 683 aaKnown RBP6.36□□□□□ -1.39
PGD1YGL025C SWI5P08153 709 aa6.35□□□□□ -1.39
PGD1YGL025C GAL2P13181 574 aa6.35□□□□□ -1.39
PGD1YGL025C PUP1P25043 261 aa6.35□□□□□ -1.39
PGD1YGL025C NTH2P35172 780 aa6.35□□□□□ -1.39
PGD1YGL025C SSN3P39073 555 aa6.35□□□□□ -1.39
PGD1YGL025C UTP7P40055 554 aaKnown RBP6.35□□□□□ -1.39
PGD1YGL025C YFL034WP43564 1073 aa6.35□□□□□ -1.39
PGD1YGL025C RPS6AP0CX37 236 aaKnown RBP6.34□□□□□ -1.39
PGD1YGL025C RPS6BP0CX38 236 aaPredicted RBP6.34□□□□□ -1.39
PGD1YGL025C SUM1P46676 1062 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 291 ms