RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W MAK16P10962 306 aaPredicted RBP6.28□□□□□ -1.4
LOC1YFR001W YJL007CP47080 104 aa6.28□□□□□ -1.4
LOC1YFR001W ENV9Q08651 330 aa6.28□□□□□ -1.4
LOC1YFR001W SYH1Q02875 849 aaKnown RBP6.26□□□□□ -1.41
LOC1YFR001W BIO2P32451 375 aa6.25□□□□□ -1.41
LOC1YFR001W BIM1P40013 344 aa6.25□□□□□ -1.41
LOC1YFR001W HST3P53687 447 aa6.25□□□□□ -1.41
LOC1YFR001W SPT5P27692 1063 aaKnown RBP6.23□□□□□ -1.41
LOC1YFR001W ATG32P40458 529 aa6.22□□□□□ -1.41
LOC1YFR001W NAF1P53919 492 aaKnown RBP6.22□□□□□ -1.41
LOC1YFR001W YDL176WQ12027 708 aa6.22□□□□□ -1.41
LOC1YFR001W YDJ1P25491 409 aaKnown RBP6.21□□□□□ -1.42
LOC1YFR001W YNL108CP53929 270 aa6.21□□□□□ -1.42
LOC1YFR001W TAF7Q05021 590 aa6.21□□□□□ -1.42
LOC1YFR001W SUP45P12385 437 aaKnown RBP6.2□□□□□ -1.42
LOC1YFR001W KIP2P28743 706 aa6.2□□□□□ -1.42
LOC1YFR001W FIG4P42837 879 aa6.2□□□□□ -1.42
LOC1YFR001W YJR115WP47152 169 aa6.2□□□□□ -1.42
LOC1YFR001W MSB3P48566 633 aaPredicted RBP6.2□□□□□ -1.42
LOC1YFR001W VAC17P25591 423 aa6.19□□□□□ -1.42
LOC1YFR001W MRT4P33201 236 aaKnown RBP6.19□□□□□ -1.42
LOC1YFR001W IXR1P33417 597 aa6.19□□□□□ -1.42
LOC1YFR001W TIF1P10081 395 aaKnown RBP6.18□□□□□ -1.42
LOC1YFR001W TEC1P18412 486 aa6.18□□□□□ -1.42
LOC1YFR001W YDR444WQ04093 687 aa6.18□□□□□ -1.42
LOC1YFR001W RPL34BP40525 121 aaKnown RBP6.17□□□□□ -1.42
LOC1YFR001W YPR084WQ06821 456 aa6.17□□□□□ -1.42
LOC1YFR001W ENO2P00925 437 aaKnown RBP6.16□□□□□ -1.42
LOC1YFR001W LCB5Q06147 687 aaKnown RBP6.16□□□□□ -1.42
LOC1YFR001W RLF2Q12495 606 aa6.16□□□□□ -1.42
LOC1YFR001W GUT2P32191 649 aa6.15□□□□□ -1.42
LOC1YFR001W MCM16Q12262 181 aa6.15□□□□□ -1.42
LOC1YFR001W UGA3P26370 528 aa6.14□□□□□ -1.43
LOC1YFR001W RTG2P32608 588 aaKnown RBP6.14□□□□□ -1.43
LOC1YFR001W STE20Q03497 939 aaKnown RBP6.14□□□□□ -1.43
LOC1YFR001W YPP1P46951 817 aa6.13□□□□□ -1.43
LOC1YFR001W ITT1Q04638 464 aa6.13□□□□□ -1.43
LOC1YFR001W FRA1Q07825 749 aa6.13□□□□□ -1.43
LOC1YFR001W ISF1P32488 338 aa6.12□□□□□ -1.43
LOC1YFR001W RTT106P40161 455 aa6.12□□□□□ -1.43
LOC1YFR001W EMP47P43555 445 aa6.12□□□□□ -1.43
LOC1YFR001W PTK2P47116 818 aaKnown RBP6.12□□□□□ -1.43
LOC1YFR001W RIM21P48565 533 aa6.12□□□□□ -1.43
LOC1YFR001W MRX10Q05648 414 aa6.11□□□□□ -1.43
LOC1YFR001W YPR204WQ08995 1032 aa6.11□□□□□ -1.43
LOC1YFR001W ENO1P00924 437 aaKnown RBP6.1□□□□□ -1.43
LOC1YFR001W MRX12P47084 519 aa6.1□□□□□ -1.43
LOC1YFR001W YBL086CP38177 466 aa6.09□□□□□ -1.43
LOC1YFR001W EMW1P42842 904 aaKnown RBP6.08□□□□□ -1.44
LOC1YFR001W RDS2P19541 446 aaKnown RBP6.07□□□□□ -1.44
LOC1YFR001W NUP85P46673 744 aa6.07□□□□□ -1.44
LOC1YFR001W APL6P46682 809 aa6.07□□□□□ -1.44
LOC1YFR001W APP1P53933 587 aa6.07□□□□□ -1.44
LOC1YFR001W SRF1Q12516 437 aa6.07□□□□□ -1.44
LOC1YFR001W OPT2Q06593 877 aa6.06□□□□□ -1.44
LOC1YFR001W TTI1P36097 1038 aa6.04□□□□□ -1.44
LOC1YFR001W ACO2P39533 789 aa6.04□□□□□ -1.44
LOC1YFR001W ATG3P40344 310 aa6.04□□□□□ -1.44
LOC1YFR001W AAD14P42884 376 aa6.04□□□□□ -1.44
LOC1YFR001W YLR346CQ06139 101 aa6.04□□□□□ -1.44
LOC1YFR001W ATG20Q07528 640 aa6.04□□□□□ -1.44
LOC1YFR001W ARG82P07250 355 aa6.03□□□□□ -1.44
LOC1YFR001W PEP12P32854 288 aa6.03□□□□□ -1.44
LOC1YFR001W GLY1P37303 387 aaKnown RBP6.03□□□□□ -1.44
LOC1YFR001W UTP13Q05946 817 aaKnown RBP6.03□□□□□ -1.44
LOC1YFR001W MKS1P34072 584 aa6.02□□□□□ -1.45
LOC1YFR001W SOH1P38633 127 aa6.02□□□□□ -1.45
LOC1YFR001W SIS2P36024 562 aa6.01□□□□□ -1.45
LOC1YFR001W ISR1Q06098 443 aaKnown RBP6.01□□□□□ -1.45
LOC1YFR001W CPS1P27614 576 aa6□□□□□ -1.45
LOC1YFR001W FBP26P32604 452 aa6□□□□□ -1.45
LOC1YFR001W HAL5P38970 855 aaKnown RBP6□□□□□ -1.45
LOC1YFR001W CAF120P53836 1060 aa6□□□□□ -1.45
LOC1YFR001W MIP1P15801 1254 aa5.99□□□□□ -1.45
LOC1YFR001W LSC2P53312 427 aa5.99□□□□□ -1.45
LOC1YFR001W YJR098CP47139 656 aa5.98□□□□□ -1.45
LOC1YFR001W SCW11P53189 542 aa5.98□□□□□ -1.45
LOC1YFR001W ISU1Q03020 165 aa5.98□□□□□ -1.45
LOC1YFR001W DFG5Q05031 458 aa5.98□□□□□ -1.45
LOC1YFR001W TY1A-BLQ12266 440 aa5.98□□□□□ -1.45
LOC1YFR001W STE6P12866 1290 aa5.97□□□□□ -1.45
LOC1YFR001W SSA4P22202 642 aaKnown RBP5.97□□□□□ -1.45
LOC1YFR001W KTR7P40504 517 aa5.97□□□□□ -1.45
LOC1YFR001W DLD1P32891 587 aa5.96□□□□□ -1.46
LOC1YFR001W TGL4P36165 910 aa5.96□□□□□ -1.46
LOC1YFR001W SPT2P06843 333 aaPredicted RBP5.95□□□□□ -1.46
LOC1YFR001W YIR007WP40566 764 aa5.95□□□□□ -1.46
LOC1YFR001W UBP2Q01476 1272 aa5.95□□□□□ -1.46
LOC1YFR001W HDA3Q06623 655 aa5.95□□□□□ -1.46
LOC1YFR001W SUB2Q07478 446 aaKnown RBP5.95□□□□□ -1.46
LOC1YFR001W BDS1Q08347 646 aa5.95□□□□□ -1.46
LOC1YFR001W PUP1P25043 261 aa5.94□□□□□ -1.46
LOC1YFR001W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
LOC1YFR001W TCB1Q12466 1186 aa5.94□□□□□ -1.46
LOC1YFR001W UTR2P32623 467 aa5.93□□□□□ -1.46
LOC1YFR001W GAL2P13181 574 aa5.92□□□□□ -1.46
LOC1YFR001W PHO87P25360 923 aa5.92□□□□□ -1.46
LOC1YFR001W NOB1Q08444 459 aaKnown RBP5.92□□□□□ -1.46
LOC1YFR001W TSC13Q99190 310 aa5.92□□□□□ -1.46
LOC1YFR001W RPP2BP02400 110 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms