RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	MRX10	Q05648	414 aa		3.83	□□□□□ -1.8
DOT6	YER088C	FRA1	Q07825	749 aa		3.83	□□□□□ -1.8
DOT6	YER088C	MCM16	Q12262	181 aa		3.83	□□□□□ -1.8
DOT6	YER088C	DPS1	P04802	557 aa	Known RBP	3.82	□□□□□ -1.8
DOT6	YER088C	TEC1	P18412	486 aa		3.82	□□□□□ -1.8
DOT6	YER088C	RDS2	P19541	446 aa	Known RBP	3.82	□□□□□ -1.8
DOT6	YER088C	CLA4	P48562	842 aa		3.82	□□□□□ -1.8
DOT6	YER088C	ITT1	Q04638	464 aa		3.81	□□□□□ -1.8
DOT6	YER088C	ISF1	P32488	338 aa		3.8	□□□□□ -1.8
DOT6	YER088C	RTG2	P32608	588 aa	Known RBP	3.8	□□□□□ -1.8
DOT6	YER088C	HED1	Q03937	162 aa		3.8	□□□□□ -1.8
DOT6	YER088C	ENO1	P00924	437 aa	Known RBP	3.8	□□□□□ -1.8
DOT6	YER088C	AIR1	P40507	360 aa	Known RBP	3.8	□□□□□ -1.8
DOT6	YER088C	EMP47	P43555	445 aa		3.8	□□□□□ -1.8
DOT6	YER088C	MRT4	P33201	236 aa	Known RBP	3.79	□□□□□ -1.8
DOT6	YER088C	SYH1	Q02875	849 aa	Known RBP	3.79	□□□□□ -1.8
DOT6	YER088C	SRC1	Q03707	834 aa		3.79	□□□□□ -1.8
DOT6	YER088C	GUT2	P32191	649 aa		3.78	□□□□□ -1.8
DOT6	YER088C	PEP12	P32854	288 aa		3.78	□□□□□ -1.8
DOT6	YER088C	MET32	Q12041	191 aa		3.78	□□□□□ -1.8
DOT6	YER088C	IXR1	P33417	597 aa		3.78	□□□□□ -1.8
DOT6	YER088C	EMW1	P42842	904 aa	Known RBP	3.78	□□□□□ -1.8
DOT6	YER088C	YPP1	P46951	817 aa		3.78	□□□□□ -1.8
DOT6	YER088C	STE20	Q03497	939 aa	Known RBP	3.78	□□□□□ -1.8
DOT6	YER088C	MRX12	P47084	519 aa		3.77	□□□□□ -1.81
DOT6	YER088C	YPR204W	Q08995	1032 aa		3.77	□□□□□ -1.81
DOT6	YER088C	KIP2	P28743	706 aa		3.77	□□□□□ -1.81
DOT6	YER088C	TTI1	P36097	1038 aa		3.77	□□□□□ -1.81
DOT6	YER088C	RPL34B	P40525	121 aa	Known RBP	3.77	□□□□□ -1.81
DOT6	YER088C	CDC4	P07834	779 aa		3.75	□□□□□ -1.81
DOT6	YER088C	HAL5	P38970	855 aa	Known RBP	3.75	□□□□□ -1.81
DOT6	YER088C	APP1	P53933	587 aa		3.75	□□□□□ -1.81
DOT6	YER088C	YBL086C	P38177	466 aa		3.75	□□□□□ -1.81
DOT6	YER088C	UTP13	Q05946	817 aa	Known RBP	3.75	□□□□□ -1.81
DOT6	YER088C	CPS1	P27614	576 aa		3.73	□□□□□ -1.81
DOT6	YER088C	AFT1	P22149	690 aa		3.73	□□□□□ -1.81
DOT6	YER088C	SIS2	P36024	562 aa		3.73	□□□□□ -1.81
DOT6	YER088C	SOH1	P38633	127 aa		3.73	□□□□□ -1.81
DOT6	YER088C	SUB2	Q07478	446 aa	Known RBP	3.73	□□□□□ -1.81
DOT6	YER088C	ATG20	Q07528	640 aa		3.73	□□□□□ -1.81
DOT6	YER088C	PUP1	P25043	261 aa		3.72	□□□□□ -1.81
DOT6	YER088C	FBP26	P32604	452 aa		3.72	□□□□□ -1.81
DOT6	YER088C	ISR1	Q06098	443 aa	Known RBP	3.72	□□□□□ -1.81
DOT6	YER088C	STE6	P12866	1290 aa		3.71	□□□□□ -1.81
DOT6	YER088C	MSB3	P48566	633 aa	Predicted RBP	3.71	□□□□□ -1.81
DOT6	YER088C	ISU1	Q03020	165 aa		3.71	□□□□□ -1.81
DOT6	YER088C	NOB1	Q08444	459 aa	Known RBP	3.71	□□□□□ -1.81
DOT6	YER088C	ASH1	P34233	588 aa		3.71	□□□□□ -1.82
DOT6	YER088C	TGL4	P36165	910 aa		3.71	□□□□□ -1.82
DOT6	YER088C	ENV9	Q08651	330 aa		3.71	□□□□□ -1.82
DOT6	YER088C	TRK1	P12685	1235 aa		3.7	□□□□□ -1.82
DOT6	YER088C	ATG3	P40344	310 aa		3.7	□□□□□ -1.82
DOT6	YER088C	SSA4	P22202	642 aa	Known RBP	3.7	□□□□□ -1.82
DOT6	YER088C	MKS1	P34072	584 aa		3.7	□□□□□ -1.82
DOT6	YER088C	HDA3	Q06623	655 aa		3.7	□□□□□ -1.82
DOT6	YER088C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.7	□□□□□ -1.82	not detected
DOT6	YER088C	SPT2	P06843	333 aa	Predicted RBP	3.69	□□□□□ -1.82
DOT6	YER088C	RTT106	P40161	455 aa		3.69	□□□□□ -1.82
DOT6	YER088C	GAL2	P13181	574 aa		3.68	□□□□□ -1.82
DOT6	YER088C	ACS2	P52910	683 aa	Known RBP	3.68	□□□□□ -1.82
DOT6	YER088C	YML083C	Q04526	418 aa		3.68	□□□□□ -1.82
DOT6	YER088C	DFG5	Q05031	458 aa		3.68	□□□□□ -1.82
DOT6	YER088C	SLX8	P40072	274 aa		3.68	□□□□□ -1.82
DOT6	YER088C	KTR7	P40504	517 aa		3.68	□□□□□ -1.82
DOT6	YER088C	TSC13	Q99190	310 aa		3.68	□□□□□ -1.82
DOT6	YER088C	PHO87	P25360	923 aa		3.67	□□□□□ -1.82
DOT6	YER088C	AIM9	P40053	627 aa	Known RBP	3.67	□□□□□ -1.82
DOT6	YER088C	YJR115W	P47152	169 aa		3.67	□□□□□ -1.82
DOT6	YER088C	ROM1	P53046	1155 aa		3.67	□□□□□ -1.82
DOT6	YER088C	MIP1	P15801	1254 aa		3.66	□□□□□ -1.82
DOT6	YER088C	UGA3	P26370	528 aa		3.66	□□□□□ -1.82
DOT6	YER088C	HST3	P53687	447 aa		3.66	□□□□□ -1.82
DOT6	YER088C	AAD14	P42884	376 aa		3.66	□□□□□ -1.82
DOT6	YER088C	PTK2	P47116	818 aa	Known RBP	3.66	□□□□□ -1.82
DOT6	YER088C	ECM23	Q02710	187 aa		3.66	□□□□□ -1.82
DOT6	YER088C	BDS1	Q08347	646 aa		3.66	□□□□□ -1.82
DOT6	YER088C	SWI5	P08153	709 aa		3.65	□□□□□ -1.82
DOT6	YER088C	PDI1	P17967	522 aa	Known RBP	3.65	□□□□□ -1.82
DOT6	YER088C	UTR2	P32623	467 aa		3.65	□□□□□ -1.82
DOT6	YER088C	WTM2	Q12206	467 aa		3.65	□□□□□ -1.82
DOT6	YER088C	HAP4	P14064	554 aa		3.65	□□□□□ -1.83
DOT6	YER088C	BRE2	P43132	505 aa		3.65	□□□□□ -1.83
DOT6	YER088C	SSA1	P10591	642 aa	Known RBP	3.64	□□□□□ -1.83
DOT6	YER088C	UBP1	P25037	809 aa		3.64	□□□□□ -1.83
DOT6	YER088C	YPQ2	Q06328	317 aa		3.64	□□□□□ -1.83
DOT6	YER088C	GAS4	Q08271	471 aa		3.64	□□□□□ -1.83
DOT6	YER088C	NTH2	P35172	780 aa		3.63	□□□□□ -1.83
DOT6	YER088C	MON2	P48563	1636 aa	Predicted RBP	3.63	□□□□□ -1.83
DOT6	YER088C	ARG82	P07250	355 aa		3.63	□□□□□ -1.83
DOT6	YER088C	RPS6A	P0CX37	236 aa	Known RBP	3.63	□□□□□ -1.83
DOT6	YER088C	RPS6B	P0CX38	236 aa	Predicted RBP	3.63	□□□□□ -1.83
DOT6	YER088C	UBX7	P38349	436 aa		3.63	□□□□□ -1.83
DOT6	YER088C	SSN3	P39073	555 aa		3.63	□□□□□ -1.83
DOT6	YER088C	YFL034W	P43564	1073 aa		3.63	□□□□□ -1.83
DOT6	YER088C	NUP85	P46673	744 aa		3.63	□□□□□ -1.83
DOT6	YER088C	SUV3	P32580	737 aa		3.62	□□□□□ -1.83
DOT6	YER088C	TPS3	P38426	1054 aa	Known RBP	3.62	□□□□□ -1.83
DOT6	YER088C	CWC15	Q03772	175 aa	Known RBP	3.62	□□□□□ -1.83
DOT6	YER088C	DAT1	P13483	248 aa	Known RBP	3.61	□□□□□ -1.83
DOT6	YER088C	DLD1	P32891	587 aa		3.61	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms