RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C TCB1Q12466 1186 aa6.68□□□□□ -1.34
VAB2YEL005C RTT106P40161 455 aa6.67□□□□□ -1.34
VAB2YEL005C TEA1P47988 759 aa6.67□□□□□ -1.34
VAB2YEL005C OSH7P38755 437 aa6.64□□□□□ -1.35
VAB2YEL005C NSG2P53898 299 aa6.63□□□□□ -1.35
VAB2YEL005C TBF1Q02457 562 aa6.63□□□□□ -1.35
VAB2YEL005C YBL086CP38177 466 aa6.62□□□□□ -1.35
VAB2YEL005C CKB1P43639 278 aa6.62□□□□□ -1.35
VAB2YEL005C FPK1P53739 893 aa6.62□□□□□ -1.35
VAB2YEL005C JJJ3P47138 172 aa6.61□□□□□ -1.35
VAB2YEL005C PUS6P53294 404 aa6.61□□□□□ -1.35
VAB2YEL005C LYS5P50113 272 aa6.6□□□□□ -1.35
VAB2YEL005C SPB4P25808 606 aaPredicted RBP6.59□□□□□ -1.35
VAB2YEL005C CCT8P47079 568 aaKnown RBP6.59□□□□□ -1.35
VAB2YEL005C MAM3Q12296 706 aa6.59□□□□□ -1.35
VAB2YEL005C ITT1Q04638 464 aa6.58□□□□□ -1.36
VAB2YEL005C TRM1P15565 570 aaKnown RBP6.57□□□□□ -1.36
VAB2YEL005C IES2P40154 320 aa6.57□□□□□ -1.36
VAB2YEL005C LEU3P08638 886 aa6.56□□□□□ -1.36
VAB2YEL005C YFL066CP43538 392 aa6.56□□□□□ -1.36
VAB2YEL005C YMR196WQ04336 1088 aa6.56□□□□□ -1.36
VAB2YEL005C THI72Q08579 599 aa6.56□□□□□ -1.36
VAB2YEL005C SCJ1P25303 377 aa6.55□□□□□ -1.36
VAB2YEL005C APP1P53933 587 aa6.55□□□□□ -1.36
VAB2YEL005C VAC17P25591 423 aa6.54□□□□□ -1.36
VAB2YEL005C NAM8Q00539 523 aaKnown RBP6.53□□□□□ -1.36
VAB2YEL005C LEO1P38439 464 aa6.52□□□□□ -1.37
VAB2YEL005C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
VAB2YEL005C NUP42P49686 430 aaKnown RBP6.51□□□□□ -1.37
VAB2YEL005C AI1P03875 834 aa6.48□□□□□ -1.37
VAB2YEL005C CDC19P00549 500 aaKnown RBP6.47□□□□□ -1.37
VAB2YEL005C EMW1P42842 904 aaKnown RBP6.47□□□□□ -1.37
VAB2YEL005C SBP1P10080 294 aaKnown RBP6.45□□□□□ -1.38
VAB2YEL005C DSF2P38213 736 aa6.44□□□□□ -1.38
VAB2YEL005C HST2P53686 357 aa6.44□□□□□ -1.38
VAB2YEL005C YPR053CQ6Q5F3 151 aa6.44□□□□□ -1.38
VAB2YEL005C DIT2P21595 489 aa6.43□□□□□ -1.38
VAB2YEL005C DFG5Q05031 458 aa6.43□□□□□ -1.38
VAB2YEL005C RPN1P38764 993 aaKnown RBP6.42□□□□□ -1.38
VAB2YEL005C CUZ1P53899 274 aa6.42□□□□□ -1.38
VAB2YEL005C MMP1Q12372 583 aa6.4□□□□□ -1.38
VAB2YEL005C MKS1P34072 584 aa6.39□□□□□ -1.39
VAB2YEL005C ESS1P22696 170 aa6.38□□□□□ -1.39
VAB2YEL005C SKN7P38889 622 aa6.37□□□□□ -1.39
VAB2YEL005C SBE2P42223 864 aaKnown RBP6.37□□□□□ -1.39
VAB2YEL005C YJU3P28321 313 aa6.36□□□□□ -1.39
VAB2YEL005C CEM1P39525 442 aa6.36□□□□□ -1.39
VAB2YEL005C TDA6Q06466 467 aa6.35□□□□□ -1.39
VAB2YEL005C BDS1Q08347 646 aa6.34□□□□□ -1.39
VAB2YEL005C GLN1P32288 370 aaKnown RBP6.33□□□□□ -1.4
VAB2YEL005C VTC4P47075 721 aa6.32□□□□□ -1.4
VAB2YEL005C YMR187CQ03236 431 aa6.32□□□□□ -1.4
VAB2YEL005C RSC30P38781 883 aa6.31□□□□□ -1.4
VAB2YEL005C YNR021WP53723 404 aaKnown RBP6.31□□□□□ -1.4
VAB2YEL005C FIG4P42837 879 aa6.3□□□□□ -1.4
VAB2YEL005C ADE12P80210 433 aaKnown RBP6.3□□□□□ -1.4
VAB2YEL005C SYT1Q06836 1226 aa6.28□□□□□ -1.4
VAB2YEL005C FBP26P32604 452 aa6.27□□□□□ -1.41
VAB2YEL005C GLC3P32775 704 aa6.27□□□□□ -1.41
VAB2YEL005C ATF2P53296 535 aa6.27□□□□□ -1.41
VAB2YEL005C STE6P12866 1290 aa6.26□□□□□ -1.41
VAB2YEL005C DAL1P32375 460 aa6.25□□□□□ -1.41
VAB2YEL005C YMR265CQ03508 461 aaKnown RBP6.25□□□□□ -1.41
VAB2YEL005C TAF7Q05021 590 aa6.25□□□□□ -1.41
VAB2YEL005C DIT1P21623 536 aa6.24□□□□□ -1.41
VAB2YEL005C YCK2P23292 546 aaKnown RBP6.24□□□□□ -1.41
VAB2YEL005C AIM7Q12156 149 aa6.24□□□□□ -1.41
VAB2YEL005C KIN1P13185 1064 aa6.23□□□□□ -1.41
VAB2YEL005C YNR014WP53719 212 aa6.22□□□□□ -1.41
VAB2YEL005C KRE33P53914 1056 aaKnown RBP6.22□□□□□ -1.41
VAB2YEL005C MCX1P38323 520 aaPredicted RBP6.2□□□□□ -1.42
VAB2YEL005C HGH1P48362 394 aaKnown RBP6.2□□□□□ -1.42
VAB2YEL005C YDR461C-AQ2V2P7 80 aa6.19□□□□□ -1.42
VAB2YEL005C AMN1P38285 549 aaPredicted RBP6.18□□□□□ -1.42
VAB2YEL005C SLN1P39928 1220 aaPredicted RBP6.18□□□□□ -1.42
VAB2YEL005C UBP15P50101 1230 aa6.18□□□□□ -1.42
VAB2YEL005C PKH3Q03306 898 aaPredicted RBP6.18□□□□□ -1.42
VAB2YEL005C YPR084WQ06821 456 aa6.18□□□□□ -1.42
VAB2YEL005C MCA1Q08601 432 aa6.18□□□□□ -1.42
VAB2YEL005C YDR215CQ12240 137 aa6.18□□□□□ -1.42
VAB2YEL005C ARG8P18544 423 aa6.17□□□□□ -1.42
VAB2YEL005C TEC1P18412 486 aa6.16□□□□□ -1.42
VAB2YEL005C KTR1P27810 393 aaKnown RBP6.16□□□□□ -1.42
VAB2YEL005C ISU1Q03020 165 aa6.15□□□□□ -1.42
VAB2YEL005C TY1A-DR3Q12441 440 aa6.15□□□□□ -1.42
VAB2YEL005C SLA1P32790 1244 aa6.14□□□□□ -1.43
VAB2YEL005C BOI2P39969 1040 aa6.13□□□□□ -1.43
VAB2YEL005C DMA2P53924 522 aa6.13□□□□□ -1.43
VAB2YEL005C GPM1P00950 247 aaKnown RBP6.12□□□□□ -1.43
VAB2YEL005C DLD3P39976 496 aaKnown RBP6.12□□□□□ -1.43
VAB2YEL005C LSB6P42951 607 aa6.12□□□□□ -1.43
VAB2YEL005C MAC1P35192 417 aa6.11□□□□□ -1.43
VAB2YEL005C SSN3P39073 555 aa6.1□□□□□ -1.43
VAB2YEL005C ATG20Q07528 640 aa6.1□□□□□ -1.43
VAB2YEL005C SSA2P10592 639 aaKnown RBP6.08□□□□□ -1.44
VAB2YEL005C MSN5P52918 1224 aa6.08□□□□□ -1.44
VAB2YEL005C GLT1Q12680 2145 aaKnown RBP6.07□□□□□ -1.44
VAB2YEL005C GUA1P38625 525 aaKnown RBP6.06□□□□□ -1.44
VAB2YEL005C BRL1P38770 471 aa6.06□□□□□ -1.44
VAB2YEL005C TAT1P38085 619 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms