RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W SPS1P08458 490 aa1.8□□□□□ -2.12
SPC110YDR356W GEF1P37020 779 aa1.8□□□□□ -2.12
SPC110YDR356W ERP2P39704 215 aa1.8□□□□□ -2.12
SPC110YDR356W NNF1P47149 201 aa1.8□□□□□ -2.12
SPC110YDR356W COG8Q04632 607 aa1.8□□□□□ -2.12
SPC110YDR356W LCB5Q06147 687 aaKnown RBP1.8□□□□□ -2.12
SPC110YDR356W NHA1Q99271 985 aa1.8□□□□□ -2.12
SPC110YDR356W DNF2Q12675 1612 aa1.79□□□□□ -2.12
SPC110YDR356W PPG1P32838 368 aa1.79□□□□□ -2.12
SPC110YDR356W TAN1P53072 289 aaPredicted RBP1.79□□□□□ -2.12
SPC110YDR356W SVF1Q05515 481 aa1.79□□□□□ -2.12
SPC110YDR356W YSH1Q06224 779 aaPredicted RBP1.79□□□□□ -2.12
SPC110YDR356W APL5Q08951 932 aaKnown RBP1.79□□□□□ -2.12
SPC110YDR356W CDC4P07834 779 aa1.79□□□□□ -2.12
SPC110YDR356W NMD2P38798 1089 aaKnown RBP1.79□□□□□ -2.12
SPC110YDR356W PEA2P40091 420 aa1.79□□□□□ -2.12
SPC110YDR356W VPS27P40343 622 aaKnown RBP1.79□□□□□ -2.12
SPC110YDR356W IRC24P40580 263 aa1.79□□□□□ -2.12
SPC110YDR356W VPS4P52917 437 aa1.79□□□□□ -2.12
SPC110YDR356W YNL247WP53852 767 aaKnown RBP1.79□□□□□ -2.12
SPC110YDR356W BUD21Q08492 214 aaPredicted RBP1.79□□□□□ -2.12
SPC110YDR356W BPT1P14772 1559 aa1.79□□□□□ -2.12
SPC110YDR356W GEA2P39993 1459 aaKnown RBP1.78□□□□□ -2.12
SPC110YDR356W GLN1P32288 370 aaKnown RBP1.78□□□□□ -2.12
SPC110YDR356W SAS3P34218 831 aa1.78□□□□□ -2.12
SPC110YDR356W GRX7P38068 203 aa1.78□□□□□ -2.12
SPC110YDR356W TIF4631P39935 952 aaKnown RBP1.78□□□□□ -2.12
SPC110YDR356W AIM21P40563 679 aa1.78□□□□□ -2.12
SPC110YDR356W ESF2P53743 316 aaKnown RBP1.78□□□□□ -2.12
SPC110YDR356W RIA1P53893 1110 aa1.78□□□□□ -2.12
SPC110YDR356W CEF1Q03654 590 aaPredicted RBP1.78□□□□□ -2.12
SPC110YDR356W ISU2Q12056 156 aa1.78□□□□□ -2.12
SPC110YDR356W TY4B-PA0A0B7P3V8 1104 aa1.78□□□□□ -2.12
SPC110YDR356W STS1P38637 319 aa1.78□□□□□ -2.12
SPC110YDR356W MEH1Q02205 184 aa1.78□□□□□ -2.12
SPC110YDR356W DPL1Q05567 589 aa1.78□□□□□ -2.12
SPC110YDR356W NOP58Q12499 511 aaKnown RBP1.78□□□□□ -2.12
SPC110YDR356W TY4A-HQ6Q5P6 413 aa1.78□□□□□ -2.12
SPC110YDR356W HIR3P47171 1648 aa1.77□□□□□ -2.13
SPC110YDR356W ARL1P38116 183 aaKnown RBP1.77□□□□□ -2.13
SPC110YDR356W BOI2P39969 1040 aa1.77□□□□□ -2.13
SPC110YDR356W SET2P46995 733 aaKnown RBP1.77□□□□□ -2.13
SPC110YDR356W ECM16Q04217 1267 aaKnown RBP1.77□□□□□ -2.13
SPC110YDR356W ENT2Q05785 613 aa1.77□□□□□ -2.13
SPC110YDR356W YVC1Q12324 675 aa1.77□□□□□ -2.13
SPC110YDR356W ECM5Q03214 1411 aa1.77□□□□□ -2.13
SPC110YDR356W THO2P53552 1597 aaKnown RBP1.77□□□□□ -2.13
SPC110YDR356W FRK1Q03002 865 aaPredicted RBP1.77□□□□□ -2.13
SPC110YDR356W SGS1P35187 1447 aa1.77□□□□□ -2.13
SPC110YDR356W INH1P01097 85 aa1.76□□□□□ -2.13
SPC110YDR356W KAR1P11927 433 aa1.76□□□□□ -2.13
SPC110YDR356W RPC37P36121 282 aa1.76□□□□□ -2.13
SPC110YDR356W MET1P36150 593 aa1.76□□□□□ -2.13
SPC110YDR356W ENT3P47160 408 aa1.76□□□□□ -2.13
SPC110YDR356W CCM1P48237 864 aaPredicted RBP1.76□□□□□ -2.13
SPC110YDR356W PRP43P53131 767 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W YAF9P53930 226 aa1.76□□□□□ -2.13
SPC110YDR356W YDR341CQ05506 607 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W YOR131CQ12486 218 aa1.76□□□□□ -2.13
SPC110YDR356W OPI1P21957 404 aa1.76□□□□□ -2.13
SPC110YDR356W PUP2P32379 260 aa1.76□□□□□ -2.13
SPC110YDR356W SWI3P32591 825 aa1.76□□□□□ -2.13
SPC110YDR356W TOM20P35180 183 aa1.76□□□□□ -2.13
SPC110YDR356W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SPC110YDR356W VPS29P38759 282 aa1.76□□□□□ -2.13
SPC110YDR356W PET100P38958 111 aa1.76□□□□□ -2.13
SPC110YDR356W ORC1P54784 914 aaPredicted RBP1.76□□□□□ -2.13
SPC110YDR356W CWC21Q03375 135 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W RRP15Q06511 250 aaPredicted RBP1.76□□□□□ -2.13
SPC110YDR356W HSP42Q12329 375 aa1.76□□□□□ -2.13
SPC110YDR356W CHD1P32657 1468 aa1.76□□□□□ -2.13
SPC110YDR356W KSS1P14681 368 aa1.76□□□□□ -2.13
SPC110YDR356W THR4P16120 514 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W SSA4P22202 642 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W MCM3P24279 971 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W MEF1P25039 761 aa1.76□□□□□ -2.13
SPC110YDR356W SEC20P28791 383 aa1.76□□□□□ -2.13
SPC110YDR356W RPN12P32496 274 aa1.76□□□□□ -2.13
SPC110YDR356W CBF5P33322 483 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SPC110YDR356W PXA2P34230 853 aa1.76□□□□□ -2.13
SPC110YDR356W PEX5P35056 612 aa1.76□□□□□ -2.13
SPC110YDR356W ISW1P38144 1129 aa1.76□□□□□ -2.13
SPC110YDR356W REI1P38344 393 aaPredicted RBP1.76□□□□□ -2.13
SPC110YDR356W MRX12P47084 519 aa1.76□□□□□ -2.13
SPC110YDR356W POB3Q04636 552 aaKnown RBP1.76□□□□□ -2.13
SPC110YDR356W HOM2P13663 365 aaKnown RBP1.75□□□□□ -2.13
SPC110YDR356W HEM3P28789 327 aa1.75□□□□□ -2.13
SPC110YDR356W PPH3P32345 308 aa1.75□□□□□ -2.13
SPC110YDR356W SPC110P32380 944 aa1.75□□□□□ -2.13
SPC110YDR356W PTH2P34222 208 aa1.75□□□□□ -2.13
SPC110YDR356W BYE1P36106 594 aa1.75□□□□□ -2.13
SPC110YDR356W SSF1P38789 453 aaPredicted RBP1.75□□□□□ -2.13
SPC110YDR356W SSP1P38871 571 aa1.75□□□□□ -2.13
SPC110YDR356W CAF120P53836 1060 aa1.75□□□□□ -2.13
SPC110YDR356W GIR2Q03768 265 aaPredicted RBP1.75□□□□□ -2.13
SPC110YDR356W SXM1Q04175 944 aaKnown RBP1.75□□□□□ -2.13
SPC110YDR356W CFT2Q12102 859 aaPredicted RBP1.75□□□□□ -2.13
SPC110YDR356W SGT2Q12118 346 aaKnown RBP1.75□□□□□ -2.13
SPC110YDR356W CLF1Q12309 687 aaPredicted RBP1.75□□□□□ -2.13
SPC110YDR356W GAL11P19659 1081 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms