RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeastyeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAL1YDR348C TY1B-JR1P47098 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-ML2Q03434 1755 aaKnown RBP6.19□□□□□ -1.42
PAL1YDR348C TY1B-ER1Q03612 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-ML1Q04711 1755 aaKnown RBP6.19□□□□□ -1.42
PAL1YDR348C TY1B-GR2Q12269 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-OLQ12273 1755 aa6.19□□□□□ -1.42
PAL1YDR348C TY1B-PLQ12414 1755 aaKnown RBP6.19□□□□□ -1.42
PAL1YDR348C CAT8P39113 1433 aa6.18□□□□□ -1.42
PAL1YDR348C GUA1P38625 525 aaKnown RBP6.18□□□□□ -1.42
PAL1YDR348C SLN1P39928 1220 aaPredicted RBP6.18□□□□□ -1.42
PAL1YDR348C DJP1P40564 432 aa6.18□□□□□ -1.42
PAL1YDR348C BNI4P53858 892 aa6.18□□□□□ -1.42
PAL1YDR348C CDC45Q08032 650 aa6.18□□□□□ -1.42
PAL1YDR348C RVB2Q12464 471 aaKnown RBP6.18□□□□□ -1.42
PAL1YDR348C ARO1P08566 1588 aaKnown RBP6.17□□□□□ -1.42
PAL1YDR348C TY3B-IQ7LHG5 1498 aaKnown RBP6.17□□□□□ -1.42
PAL1YDR348C XDJ1P39102 459 aa6.16□□□□□ -1.42
PAL1YDR348C VPS27P40343 622 aaKnown RBP6.16□□□□□ -1.42
PAL1YDR348C CSC1Q06538 782 aa6.16□□□□□ -1.42
PAL1YDR348C QCR6P00127 147 aa6.15□□□□□ -1.42
PAL1YDR348C PTC2P39966 464 aaKnown RBP6.15□□□□□ -1.42
PAL1YDR348C TEA1P47988 759 aa6.15□□□□□ -1.42
PAL1YDR348C YPR109WQ06104 294 aa6.15□□□□□ -1.42
PAL1YDR348C RPP0P05317 312 aaKnown RBP6.15□□□□□ -1.43
PAL1YDR348C PCT1P13259 424 aa6.15□□□□□ -1.43
PAL1YDR348C PAF1P38351 445 aa6.15□□□□□ -1.43
PAL1YDR348C ISU2Q12056 156 aa6.14□□□□□ -1.43
PAL1YDR348C IQG1Q12280 1495 aa6.14□□□□□ -1.43
PAL1YDR348C TY1B-BRQ12193 1756 aa6.13□□□□□ -1.43
PAL1YDR348C TY1B-GR3Q12316 1755 aa6.13□□□□□ -1.43
PAL1YDR348C TY1B-ORQ92393 1755 aa6.13□□□□□ -1.43
PAL1YDR348C YML082WQ04533 649 aaKnown RBP6.13□□□□□ -1.43
PAL1YDR348C TFB4Q12004 338 aa6.13□□□□□ -1.43
PAL1YDR348C RPP1BP10622 106 aaKnown RBP6.12□□□□□ -1.43
PAL1YDR348C NIS1P53939 407 aa6.12□□□□□ -1.43
PAL1YDR348C TUM1Q08686 304 aaKnown RBP6.12□□□□□ -1.43
PAL1YDR348C EDE1P34216 1381 aa6.12□□□□□ -1.43
PAL1YDR348C NUP157P40064 1391 aaKnown RBP6.12□□□□□ -1.43
PAL1YDR348C PDR12Q02785 1511 aa6.12□□□□□ -1.43
PAL1YDR348C KTR1P27810 393 aaKnown RBP6.11□□□□□ -1.43
PAL1YDR348C YRB30P53107 440 aaPredicted RBP6.11□□□□□ -1.43
PAL1YDR348C CTR9P89105 1077 aa6.11□□□□□ -1.43
PAL1YDR348C TY1B-JR2P47100 1755 aaKnown RBP6.11□□□□□ -1.43
PAL1YDR348C TY1B-ER2Q03619 1755 aa6.11□□□□□ -1.43
PAL1YDR348C TY1B-MR1Q04214 1755 aa6.11□□□□□ -1.43
PAL1YDR348C TY1B-MR2Q04670 1755 aaKnown RBP6.11□□□□□ -1.43
PAL1YDR348C TY1B-LR1Q12088 1755 aaKnown RBP6.11□□□□□ -1.43
PAL1YDR348C TY1B-NL1Q12112 1755 aa6.11□□□□□ -1.43
PAL1YDR348C TY1B-GR1Q12141 1755 aa6.11□□□□□ -1.43
PAL1YDR348C TY1B-BLQ12490 1755 aa6.11□□□□□ -1.43
PAL1YDR348C PEX21P50091 288 aa6.1□□□□□ -1.43
PAL1YDR348C KIP3P53086 805 aaKnown RBP6.1□□□□□ -1.43
PAL1YDR348C YGR130CP53278 816 aa6.1□□□□□ -1.43
PAL1YDR348C YRR1Q12172 810 aa6.1□□□□□ -1.43
PAL1YDR348C DNF2Q12675 1612 aa6.1□□□□□ -1.43
PAL1YDR348C CLB5P30283 435 aa6.09□□□□□ -1.43
PAL1YDR348C TYW1Q08960 810 aaKnown RBP6.09□□□□□ -1.43
PAL1YDR348C MSP1P28737 362 aa6.09□□□□□ -1.44
PAL1YDR348C YDL144CQ07589 356 aa6.09□□□□□ -1.44
PAL1YDR348C NOT3P06102 836 aaKnown RBP6.08□□□□□ -1.44
PAL1YDR348C PDR1P12383 1068 aa6.08□□□□□ -1.44
PAL1YDR348C SUI2P20459 304 aaKnown RBP6.08□□□□□ -1.44
PAL1YDR348C VPS24P36095 224 aaKnown RBP6.08□□□□□ -1.44
PAL1YDR348C CSN12P47130 423 aa6.08□□□□□ -1.44
PAL1YDR348C FPK1P53739 893 aa6.08□□□□□ -1.44
PAL1YDR348C BUD21Q08492 214 aaPredicted RBP6.08□□□□□ -1.44
PAL1YDR348C YOR093CQ12275 1648 aa6.07□□□□□ -1.44
PAL1YDR348C SCJ1P25303 377 aa6.07□□□□□ -1.44
PAL1YDR348C KNS1P32350 737 aaPredicted RBP6.07□□□□□ -1.44
PAL1YDR348C YPP1P46951 817 aa6.07□□□□□ -1.44
PAL1YDR348C YPR015CQ12531 247 aa6.07□□□□□ -1.44
PAL1YDR348C TRM3Q07527 1436 aa6.07□□□□□ -1.44
PAL1YDR348C RAM1P22007 431 aa6.06□□□□□ -1.44
PAL1YDR348C NAP1P25293 417 aaKnown RBP6.06□□□□□ -1.44
PAL1YDR348C HPC2Q01448 625 aa6.06□□□□□ -1.44
PAL1YDR348C TFB3Q03290 321 aa6.06□□□□□ -1.44
PAL1YDR348C NOP58Q12499 511 aaKnown RBP6.06□□□□□ -1.44
PAL1YDR348C LTE1P07866 1435 aa6.06□□□□□ -1.44
PAL1YDR348C ARL1P38116 183 aaKnown RBP6.05□□□□□ -1.44
PAL1YDR348C TAF5P38129 798 aa6.05□□□□□ -1.44
PAL1YDR348C SIT4P20604 311 aa6.04□□□□□ -1.44
PAL1YDR348C PKC1P24583 1151 aa6.04□□□□□ -1.44
PAL1YDR348C HST2P53686 357 aa6.04□□□□□ -1.44
PAL1YDR348C ERF2Q06551 359 aa6.04□□□□□ -1.44
PAL1YDR348C BUD3P25558 1636 aa6.04□□□□□ -1.44
PAL1YDR348C NTE1Q04958 1679 aa6.03□□□□□ -1.44
PAL1YDR348C CDC25P04821 1589 aa6.03□□□□□ -1.44
PAL1YDR348C DPS1P04802 557 aaKnown RBP6.03□□□□□ -1.44
PAL1YDR348C NUD1P32336 851 aa6.03□□□□□ -1.44
PAL1YDR348C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
PAL1YDR348C YMR196WQ04336 1088 aa6.03□□□□□ -1.44
PAL1YDR348C DOP1Q03921 1698 aa6.03□□□□□ -1.44
PAL1YDR348C ESS1P22696 170 aa6.02□□□□□ -1.45
PAL1YDR348C STR2P47164 639 aa6.02□□□□□ -1.45
PAL1YDR348C CWC22P53333 577 aaKnown RBP6.02□□□□□ -1.45
PAL1YDR348C LSP1Q12230 341 aaKnown RBP6.02□□□□□ -1.45
PAL1YDR348C RLF2Q12495 606 aa6.02□□□□□ -1.45
PAL1YDR348C RPO21P04050 1733 aaKnown RBP6.02□□□□□ -1.45
PAL1YDR348C SPO14P36126 1683 aa6.01□□□□□ -1.45
PAL1YDR348C KEX2P13134 814 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms