RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W TSC11P40061 1430 aa1.4□□□□□ -2.18
SCC2YDR180W NOP53Q12080 455 aaKnown RBP1.4□□□□□ -2.18
SCC2YDR180W APC1P53886 1748 aa1.4□□□□□ -2.18
SCC2YDR180W SSA2P10592 639 aaKnown RBP1.4□□□□□ -2.19
SCC2YDR180W KNS1P32350 737 aaPredicted RBP1.4□□□□□ -2.19
SCC2YDR180W CDC3P32457 520 aaKnown RBP1.4□□□□□ -2.19
SCC2YDR180W TTI1P36097 1038 aa1.4□□□□□ -2.19
SCC2YDR180W MAP2P38174 421 aaKnown RBP1.4□□□□□ -2.19
SCC2YDR180W KIC1P38692 1080 aa1.4□□□□□ -2.19
SCC2YDR180W EDE1P34216 1381 aa1.4□□□□□ -2.19
SCC2YDR180W ESS1P22696 170 aa1.4□□□□□ -2.19
SCC2YDR180W BYE1P36106 594 aa1.4□□□□□ -2.19
SCC2YDR180W SIC1P38634 284 aa1.4□□□□□ -2.19
SCC2YDR180W NUP145P49687 1317 aa1.4□□□□□ -2.19
SCC2YDR180W YDJ1P25491 409 aaKnown RBP1.4□□□□□ -2.19
SCC2YDR180W VPS4P52917 437 aa1.4□□□□□ -2.19
SCC2YDR180W PKH3Q03306 898 aaPredicted RBP1.4□□□□□ -2.19
SCC2YDR180W YMR196WQ04336 1088 aa1.4□□□□□ -2.19
SCC2YDR180W YOR238WQ08634 303 aa1.4□□□□□ -2.19
SCC2YDR180W TY4B-HP0C2J7 1802 aa1.4□□□□□ -2.19
SCC2YDR180W YJU3P28321 313 aa1.39□□□□□ -2.19
SCC2YDR180W YMR1P47147 688 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SCC2YDR180W SNU71P53207 620 aaKnown RBP1.39□□□□□ -2.19
SCC2YDR180W YGR130CP53278 816 aa1.39□□□□□ -2.19
SCC2YDR180W YDR090CQ03193 310 aa1.39□□□□□ -2.19
SCC2YDR180W IPL1P38991 367 aa1.39□□□□□ -2.19
SCC2YDR180W TEA1P47988 759 aa1.39□□□□□ -2.19
SCC2YDR180W NUP188P52593 1655 aaKnown RBP1.39□□□□□ -2.19
SCC2YDR180W ARG8P18544 423 aa1.39□□□□□ -2.19
SCC2YDR180W PUP1P25043 261 aa1.39□□□□□ -2.19
SCC2YDR180W YJL171CP46992 396 aa1.39□□□□□ -2.19
SCC2YDR180W NST1P53935 1240 aa1.39□□□□□ -2.19
SCC2YDR180W YLR326WQ06170 240 aaKnown RBP1.39□□□□□ -2.19
SCC2YDR180W BMS1Q08965 1183 aaKnown RBP1.39□□□□□ -2.19
SCC2YDR180W BUD3P25558 1636 aa1.39□□□□□ -2.19
SCC2YDR180W RAD16P31244 790 aa1.38□□□□□ -2.19
SCC2YDR180W RAD54P32863 898 aa1.38□□□□□ -2.19
SCC2YDR180W SSF1P38789 453 aaPredicted RBP1.38□□□□□ -2.19
SCC2YDR180W THI12P42883 340 aa1.38□□□□□ -2.19
SCC2YDR180W THI5P43534 340 aa1.38□□□□□ -2.19
SCC2YDR180W THI11P47183 340 aa1.38□□□□□ -2.19
SCC2YDR180W ATH1P48016 1211 aa1.38□□□□□ -2.19
SCC2YDR180W YNL035CP53962 389 aaKnown RBP1.38□□□□□ -2.19
SCC2YDR180W THI13Q07748 340 aa1.38□□□□□ -2.19
SCC2YDR180W ENO1P00924 437 aaKnown RBP1.38□□□□□ -2.19
SCC2YDR180W RME1P32338 300 aaKnown RBP1.38□□□□□ -2.19
SCC2YDR180W CWC22P53333 577 aaKnown RBP1.38□□□□□ -2.19
SCC2YDR180W KRE33P53914 1056 aaKnown RBP1.38□□□□□ -2.19
SCC2YDR180W ITT1Q04638 464 aa1.38□□□□□ -2.19
SCC2YDR180W PCS60P38137 543 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19 RIP-Chip
SCC2YDR180W JIP5Q06214 492 aaPredicted RBP1.38□□□□□ -2.19
SCC2YDR180W RAD59Q12223 238 aa1.38□□□□□ -2.19
SCC2YDR180W NIS1P53939 407 aa1.38□□□□□ -2.19
SCC2YDR180W ECM23Q02710 187 aa1.38□□□□□ -2.19
SCC2YDR180W SLX5P32828 619 aaKnown RBP1.37□□□□□ -2.19
SCC2YDR180W PAM1P37304 830 aaKnown RBP1.37□□□□□ -2.19
SCC2YDR180W YBL113CQ7M4S9 792 aa1.37□□□□□ -2.19
SCC2YDR180W FPK1P53739 893 aa1.37□□□□□ -2.19
SCC2YDR180W PDR11P40550 1411 aa1.37□□□□□ -2.19
SCC2YDR180W ENO2P00925 437 aaKnown RBP1.37□□□□□ -2.19
SCC2YDR180W UBX7P38349 436 aa1.37□□□□□ -2.19
SCC2YDR180W ALD4P46367 519 aaKnown RBP1.37□□□□□ -2.19
SCC2YDR180W ALD2P47771 506 aa1.37□□□□□ -2.19
SCC2YDR180W SEN54Q02825 467 aaPredicted RBP1.37□□□□□ -2.19
SCC2YDR180W GRE2Q12068 342 aaKnown RBP1.37□□□□□ -2.19
SCC2YDR180W TY4B-JP47024 1803 aa1.37□□□□□ -2.19
SCC2YDR180W KEX1P09620 729 aa1.36□□□□□ -2.19
SCC2YDR180W HEM3P28789 327 aa1.36□□□□□ -2.19
SCC2YDR180W ORM2Q06144 216 aa1.36□□□□□ -2.19
SCC2YDR180W MMP1Q12372 583 aa1.36□□□□□ -2.19
SCC2YDR180W BCK1Q01389 1478 aa1.36□□□□□ -2.19
SCC2YDR180W ISF1P32488 338 aa1.36□□□□□ -2.19
SCC2YDR180W TGL4P36165 910 aa1.36□□□□□ -2.19
SCC2YDR180W GRS1P38088 690 aaKnown RBP1.36□□□□□ -2.19
SCC2YDR180W BRN1P38170 754 aa1.36□□□□□ -2.19
SCC2YDR180W ERP5P38819 212 aa1.36□□□□□ -2.19
SCC2YDR180W YPR109WQ06104 294 aa1.36□□□□□ -2.19
SCC2YDR180W YTA7P40340 1379 aa1.36□□□□□ -2.19
SCC2YDR180W ATE1P16639 503 aa1.36□□□□□ -2.19
SCC2YDR180W VMA1P17255 1071 aaKnown RBP1.36□□□□□ -2.19
SCC2YDR180W DCW1P36091 449 aa1.36□□□□□ -2.19
SCC2YDR180W UBP9P39967 754 aa1.36□□□□□ -2.19
SCC2YDR180W OYE2Q03558 400 aaKnown RBP1.36□□□□□ -2.19
SCC2YDR180W RGR1P19263 1082 aa1.36□□□□□ -2.19
SCC2YDR180W PSE1P32337 1089 aaKnown RBP1.36□□□□□ -2.19
SCC2YDR180W SLN1P39928 1220 aaPredicted RBP1.36□□□□□ -2.19
SCC2YDR180W NUG1P40010 520 aaKnown RBP1.36□□□□□ -2.19
SCC2YDR180W VPS72Q03388 795 aa1.36□□□□□ -2.19
SCC2YDR180W YRF1-4O13559 1382 aa1.36□□□□□ -2.19
SCC2YDR180W SNF7P39929 240 aaKnown RBP1.35□□□□□ -2.19
SCC2YDR180W POL32P47110 350 aa1.35□□□□□ -2.19
SCC2YDR180W YGR273CP53329 174 aa1.35□□□□□ -2.19
SCC2YDR180W CLC1P17891 233 aa1.35□□□□□ -2.19
SCC2YDR180W SAP190P36123 1033 aa1.35□□□□□ -2.19
SCC2YDR180W YJR008WP47085 338 aa1.35□□□□□ -2.19
SCC2YDR180W YSP2Q06681 1438 aa1.35□□□□□ -2.19
SCC2YDR180W SLY41P22215 453 aa1.35□□□□□ -2.19
SCC2YDR180W ROX1P25042 368 aa1.35□□□□□ -2.19
SCC2YDR180W GUT1P32190 709 aa1.35□□□□□ -2.19
SCC2YDR180W ORC6P38826 435 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 96.7 ms