RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C TRP5P00931 707 aaKnown RBP9.47□□□□□ -0.89
CIT2YCR005C CPS1P27614 576 aa9.47□□□□□ -0.89
CIT2YCR005C PTC4P38089 393 aa9.47□□□□□ -0.89
CIT2YCR005C YEL023CP39992 682 aa9.47□□□□□ -0.89
CIT2YCR005C COX6P00427 148 aa9.46□□□□□ -0.9
CIT2YCR005C PSK1P31374 1356 aa9.45□□□□□ -0.9
CIT2YCR005C AI4P03878 556 aa9.44□□□□□ -0.9
CIT2YCR005C PPH3P32345 308 aa9.44□□□□□ -0.9
CIT2YCR005C PDS5Q04264 1277 aa9.44□□□□□ -0.9
CIT2YCR005C SEC3P33332 1336 aaKnown RBP9.43□□□□□ -0.9
CIT2YCR005C VHR2P40041 505 aa9.43□□□□□ -0.9
CIT2YCR005C RPN1P38764 993 aaKnown RBP9.42□□□□□ -0.9
CIT2YCR005C MPH3P0CE00 602 aa9.41□□□□□ -0.9
CIT2YCR005C RPP1BP10622 106 aaKnown RBP9.41□□□□□ -0.9
CIT2YCR005C RAD54P32863 898 aa9.41□□□□□ -0.9
CIT2YCR005C UBP14P38237 781 aaKnown RBP9.41□□□□□ -0.9
CIT2YCR005C YNL035CP53962 389 aaKnown RBP9.41□□□□□ -0.9
CIT2YCR005C MLP1Q02455 1875 aaKnown RBP9.4□□□□□ -0.91
CIT2YCR005C LEU2P04173 364 aaPredicted RBP9.39□□□□□ -0.91
CIT2YCR005C KEX1P09620 729 aa9.39□□□□□ -0.91
CIT2YCR005C TFG1P41895 735 aaPredicted RBP9.39□□□□□ -0.91
CIT2YCR005C YLR326WQ06170 240 aaKnown RBP9.39□□□□□ -0.91
CIT2YCR005C IOC2Q12072 812 aa9.39□□□□□ -0.91
CIT2YCR005C SOL3P38858 249 aa9.38□□□□□ -0.91
CIT2YCR005C MTR4P47047 1073 aaKnown RBP9.38□□□□□ -0.91
CIT2YCR005C FKH1P40466 484 aa9.37□□□□□ -0.91
CIT2YCR005C SEC61P32915 480 aa9.37□□□□□ -0.91
CIT2YCR005C DAN4P47179 1161 aa9.36□□□□□ -0.91
CIT2YCR005C NST1P53935 1240 aa9.36□□□□□ -0.91
CIT2YCR005C LDB19Q12502 818 aa9.36□□□□□ -0.91
CIT2YCR005C CSE4P36012 229 aa9.35□□□□□ -0.91
CIT2YCR005C IES2P40154 320 aa9.34□□□□□ -0.91
CIT2YCR005C YNR021WP53723 404 aaKnown RBP9.34□□□□□ -0.91
CIT2YCR005C SPT7P35177 1332 aa9.33□□□□□ -0.92
CIT2YCR005C ADE6P38972 1358 aaKnown RBP9.33□□□□□ -0.92
CIT2YCR005C PDI1P17967 522 aaKnown RBP9.33□□□□□ -0.92
CIT2YCR005C RTG1P32607 177 aa9.33□□□□□ -0.92
CIT2YCR005C RTF1P53064 558 aa9.33□□□□□ -0.92
CIT2YCR005C YDR090CQ03193 310 aa9.33□□□□□ -0.92
CIT2YCR005C YML133CQ03099 1374 aa9.32□□□□□ -0.92
CIT2YCR005C YLL067CQ07888 1374 aa9.32□□□□□ -0.92
CIT2YCR005C YLL066CQ99208 1374 aa9.32□□□□□ -0.92
CIT2YCR005C RPS24AP0CX31 135 aaKnown RBP9.31□□□□□ -0.92
CIT2YCR005C RPS24BP0CX32 135 aaKnown RBP9.31□□□□□ -0.92
CIT2YCR005C PRP45P28004 379 aaPredicted RBP9.31□□□□□ -0.92
CIT2YCR005C PCS60P38137 543 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
CIT2YCR005C TY4B-HP0C2J7 1802 aa9.3□□□□□ -0.92
CIT2YCR005C TY4B-JP47024 1803 aa9.3□□□□□ -0.92
CIT2YCR005C NCR1Q12200 1170 aa9.29□□□□□ -0.92
CIT2YCR005C PRP43P53131 767 aaKnown RBP9.28□□□□□ -0.92
CIT2YCR005C KAR2P16474 682 aaKnown RBP9.27□□□□□ -0.93
CIT2YCR005C PRP5P21372 849 aaPredicted RBP9.27□□□□□ -0.93
CIT2YCR005C RRP5Q05022 1729 aaKnown RBP9.27□□□□□ -0.93
CIT2YCR005C GRX4P32642 244 aa9.26□□□□□ -0.93
CIT2YCR005C TAP42Q04372 366 aa9.26□□□□□ -0.93
CIT2YCR005C NUP42P49686 430 aaKnown RBP9.25□□□□□ -0.93
CIT2YCR005C ENT1Q12518 454 aa9.25□□□□□ -0.93
CIT2YCR005C DPS1P04802 557 aaKnown RBP9.24□□□□□ -0.93
CIT2YCR005C PSE1P32337 1089 aaKnown RBP9.24□□□□□ -0.93
CIT2YCR005C GAS4Q08271 471 aa9.24□□□□□ -0.93
CIT2YCR005C AIM7Q12156 149 aa9.24□□□□□ -0.93
CIT2YCR005C SLI15P38283 698 aa9.24□□□□□ -0.93
CIT2YCR005C ATF2P53296 535 aa9.24□□□□□ -0.93
CIT2YCR005C APP1P53933 587 aa9.23□□□□□ -0.93
CIT2YCR005C SIS1P25294 352 aaKnown RBP9.22□□□□□ -0.93
CIT2YCR005C ENP1P38333 483 aaKnown RBP9.22□□□□□ -0.93
CIT2YCR005C PML39Q03760 334 aa9.22□□□□□ -0.93
CIT2YCR005C YDL129WQ07555 291 aa9.22□□□□□ -0.93
CIT2YCR005C ILV3P39522 585 aaKnown RBP9.21□□□□□ -0.94
CIT2YCR005C MSB3P48566 633 aaPredicted RBP9.21□□□□□ -0.94
CIT2YCR005C PAP2P53632 584 aaKnown RBP9.21□□□□□ -0.94
CIT2YCR005C PEX29Q03370 554 aa9.21□□□□□ -0.94
CIT2YCR005C CSC1Q06538 782 aa9.21□□□□□ -0.94
CIT2YCR005C TCB1Q12466 1186 aa9.21□□□□□ -0.94
CIT2YCR005C DIT2P21595 489 aa9.2□□□□□ -0.94
CIT2YCR005C HIM1Q06674 414 aa9.2□□□□□ -0.94
CIT2YCR005C ENV9Q08651 330 aa9.2□□□□□ -0.94
CIT2YCR005C SLM3Q12093 417 aa9.2□□□□□ -0.94
CIT2YCR005C YRF1-2P40105 1681 aa9.19□□□□□ -0.94
CIT2YCR005C TRK1P12685 1235 aa9.18□□□□□ -0.94
CIT2YCR005C YEF3P16521 1044 aaKnown RBP9.18□□□□□ -0.94
CIT2YCR005C CLB5P30283 435 aa9.18□□□□□ -0.94
CIT2YCR005C PEX21P50091 288 aa9.18□□□□□ -0.94
CIT2YCR005C AUS1Q08409 1394 aa9.17□□□□□ -0.94
CIT2YCR005C ORC6P38826 435 aa9.17□□□□□ -0.94
CIT2YCR005C DPL1Q05567 589 aa9.17□□□□□ -0.94
CIT2YCR005C IMH1Q06704 911 aaKnown RBP9.17□□□□□ -0.94
CIT2YCR005C YJL171CP46992 396 aa9.16□□□□□ -0.94
CIT2YCR005C TFB4Q12004 338 aa9.16□□□□□ -0.94
CIT2YCR005C GLC3P32775 704 aa9.15□□□□□ -0.94
CIT2YCR005C RPO41P13433 1351 aaKnown RBP9.15□□□□□ -0.94
CIT2YCR005C RSF2P46974 1380 aa9.15□□□□□ -0.94
CIT2YCR005C FKS3Q04952 1785 aa9.15□□□□□ -0.95
CIT2YCR005C XKS1P42826 600 aa9.13□□□□□ -0.95
CIT2YCR005C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
CIT2YCR005C IOC4Q04213 475 aa9.12□□□□□ -0.95
CIT2YCR005C AIR2Q12476 344 aaKnown RBP9.12□□□□□ -0.95
CIT2YCR005C URB1P34241 1764 aaKnown RBP9.11□□□□□ -0.95
CIT2YCR005C YIL177CP40434 1758 aa9.11□□□□□ -0.95
CIT2YCR005C YJL225CP40889 1758 aa9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms