RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C TAF5P38129 798 aa2.56□□□□□ -2
PEP1YBL017C SSA2P10592 639 aaKnown RBP2.56□□□□□ -2
PEP1YBL017C XKS1P42826 600 aa2.55□□□□□ -2
PEP1YBL017C HGH1P48362 394 aaKnown RBP2.55□□□□□ -2
PEP1YBL017C DSD1P53095 428 aa2.55□□□□□ -2
PEP1YBL017C HEF3P53978 1044 aaKnown RBP2.55□□□□□ -2
PEP1YBL017C AIM44Q99299 758 aa2.55□□□□□ -2
PEP1YBL017C UBP16Q02863 499 aa2.55□□□□□ -2
PEP1YBL017C NTH2P35172 780 aa2.55□□□□□ -2
PEP1YBL017C KIN4Q01919 800 aa2.55□□□□□ -2
PEP1YBL017C NYV1Q12255 253 aa2.55□□□□□ -2
PEP1YBL017C YLR278CQ05854 1341 aa2.54□□□□□ -2
PEP1YBL017C YBL086CP38177 466 aa2.54□□□□□ -2
PEP1YBL017C KIP3P53086 805 aaKnown RBP2.54□□□□□ -2
PEP1YBL017C UGA3P26370 528 aa2.54□□□□□ -2
PEP1YBL017C NPL4P33755 580 aa2.54□□□□□ -2
PEP1YBL017C PFF1P38244 976 aa2.54□□□□□ -2
PEP1YBL017C ALD2P47771 506 aa2.54□□□□□ -2
PEP1YBL017C ERO1Q03103 563 aa2.54□□□□□ -2
PEP1YBL017C YLR271WQ06152 274 aa2.54□□□□□ -2
PEP1YBL017C DIB1Q06819 143 aaPredicted RBP2.54□□□□□ -2
PEP1YBL017C GRE2Q12068 342 aaKnown RBP2.54□□□□□ -2
PEP1YBL017C ADR1P07248 1323 aa2.53□□□□□ -2
PEP1YBL017C ARG8P18544 423 aa2.53□□□□□ -2
PEP1YBL017C OSM1P21375 501 aaKnown RBP2.53□□□□□ -2
PEP1YBL017C MAM1P40065 302 aa2.53□□□□□ -2
PEP1YBL017C YJL171CP46992 396 aa2.53□□□□□ -2
PEP1YBL017C RTF1P53064 558 aa2.53□□□□□ -2
PEP1YBL017C ECM29P38737 1868 aa2.53□□□□□ -2
PEP1YBL017C PRP45P28004 379 aaPredicted RBP2.53□□□□□ -2
PEP1YBL017C SIT4P20604 311 aa2.53□□□□□ -2.01
PEP1YBL017C COBP00163 385 aa2.52□□□□□ -2.01
PEP1YBL017C RPS24AP0CX31 135 aaKnown RBP2.52□□□□□ -2.01
PEP1YBL017C RPS24BP0CX32 135 aaKnown RBP2.52□□□□□ -2.01
PEP1YBL017C YRB30P53107 440 aaPredicted RBP2.52□□□□□ -2.01
PEP1YBL017C PUS5Q06244 254 aa2.52□□□□□ -2.01
PEP1YBL017C CHZ1P40019 153 aaPredicted RBP2.51□□□□□ -2.01
PEP1YBL017C HIM1Q06674 414 aa2.51□□□□□ -2.01
PEP1YBL017C MSB4Q12317 492 aa2.51□□□□□ -2.01
PEP1YBL017C SWI1P09547 1314 aa2.51□□□□□ -2.01
PEP1YBL017C KCC4P25389 1037 aa2.51□□□□□ -2.01
PEP1YBL017C YKL222CP35995 705 aa2.51□□□□□ -2.01
PEP1YBL017C YKL133CP36066 463 aa2.51□□□□□ -2.01
PEP1YBL017C BUG1Q12191 341 aa2.51□□□□□ -2.01
PEP1YBL017C MTC5Q03897 1148 aa2.51□□□□□ -2.01
PEP1YBL017C RTG3P38165 486 aa2.51□□□□□ -2.01
PEP1YBL017C RPN11P43588 306 aaKnown RBP2.5□□□□□ -2.01
PEP1YBL017C ALD3P54114 506 aa2.5□□□□□ -2.01
PEP1YBL017C CTT1P06115 562 aa2.5□□□□□ -2.01
PEP1YBL017C DCD1P06773 312 aa2.5□□□□□ -2.01
PEP1YBL017C PRP40P33203 583 aaKnown RBP2.5□□□□□ -2.01
PEP1YBL017C CSE4P36012 229 aa2.5□□□□□ -2.01
PEP1YBL017C UGA2P38067 497 aa2.5□□□□□ -2.01
PEP1YBL017C RPG1P38249 964 aaKnown RBP2.5□□□□□ -2.01
PEP1YBL017C TRK1P12685 1235 aa2.49□□□□□ -2.01
PEP1YBL017C YPR204WQ08995 1032 aa2.49□□□□□ -2.01
PEP1YBL017C GCD7P32502 381 aaPredicted RBP2.49□□□□□ -2.01
PEP1YBL017C AKL1P38080 1108 aaKnown RBP2.49□□□□□ -2.01
PEP1YBL017C SSP2Q08646 371 aa2.49□□□□□ -2.01
PEP1YBL017C UBR2Q07963 1872 aa2.49□□□□□ -2.01
PEP1YBL017C PRD1P25375 712 aa2.49□□□□□ -2.01
PEP1YBL017C FPK1P53739 893 aa2.49□□□□□ -2.01
PEP1YBL017C UBX2Q04228 584 aa2.49□□□□□ -2.01
PEP1YBL017C YOL057WQ08225 711 aa2.49□□□□□ -2.01
PEP1YBL017C SHC1P39000 512 aa2.48□□□□□ -2.01
PEP1YBL017C LYS4P49367 693 aaPredicted RBP2.48□□□□□ -2.01
PEP1YBL017C PDS5Q04264 1277 aa2.48□□□□□ -2.01
PEP1YBL017C LAM6Q08001 693 aa2.48□□□□□ -2.01
PEP1YBL017C DIP2Q12220 943 aaPredicted RBP2.48□□□□□ -2.01
PEP1YBL017C RAT1Q02792 1006 aaKnown RBP2.48□□□□□ -2.01
PEP1YBL017C UTP7P40055 554 aaKnown RBP2.48□□□□□ -2.01
PEP1YBL017C AOS1Q06624 347 aa2.48□□□□□ -2.01
PEP1YBL017C AIM21P40563 679 aa2.47□□□□□ -2.01
PEP1YBL017C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
PEP1YBL017C THI22Q06490 572 aa2.47□□□□□ -2.01
PEP1YBL017C RPS19AP07280 144 aaKnown RBP2.47□□□□□ -2.01
PEP1YBL017C RPS19BP07281 144 aaPredicted RBP2.47□□□□□ -2.01
PEP1YBL017C GEF1P37020 779 aa2.47□□□□□ -2.01
PEP1YBL017C SYF1Q04048 859 aaPredicted RBP2.47□□□□□ -2.01
PEP1YBL017C TUM1Q08686 304 aaKnown RBP2.46□□□□□ -2.02
PEP1YBL017C FRK1Q03002 865 aaPredicted RBP2.46□□□□□ -2.02
PEP1YBL017C DPS1P04802 557 aaKnown RBP2.46□□□□□ -2.02
PEP1YBL017C RMT2Q03305 412 aa2.46□□□□□ -2.02
PEP1YBL017C GRX6Q12438 231 aa2.46□□□□□ -2.02
PEP1YBL017C GLO3P38682 493 aaKnown RBP2.46□□□□□ -2.02
PEP1YBL017C NOP53Q12080 455 aaKnown RBP2.46□□□□□ -2.02
PEP1YBL017C ETP1P38748 585 aaKnown RBP2.45□□□□□ -2.02
PEP1YBL017C POL5P39985 1022 aaKnown RBP2.45□□□□□ -2.02
PEP1YBL017C LAA1P39526 2014 aa2.45□□□□□ -2.02
PEP1YBL017C DIT2P21595 489 aa2.45□□□□□ -2.02
PEP1YBL017C MOT2P34909 587 aaKnown RBP2.45□□□□□ -2.02
PEP1YBL017C YPP1P46951 817 aa2.44□□□□□ -2.02
PEP1YBL017C IRC3Q06683 689 aa2.44□□□□□ -2.02
PEP1YBL017C FLO11P08640 1367 aa2.44□□□□□ -2.02
PEP1YBL017C CST6P40535 587 aa2.44□□□□□ -2.02
PEP1YBL017C PSF3Q12146 194 aa2.44□□□□□ -2.02
PEP1YBL017C CDC16P09798 840 aa2.44□□□□□ -2.02
PEP1YBL017C DNM1P54861 757 aa2.44□□□□□ -2.02
PEP1YBL017C ECM23Q02710 187 aa2.44□□□□□ -2.02
PEP1YBL017C AAD16Q02895 342 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms