RNA–Protein interactions for RNA: RPM1

RPM1, Transcript of RNA component of mitochondrial RNase P, yeastyeast

Gene RPM1, Length 483 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPM1RPM1 MDG1P53885 366 aa13.2□□□□□ -0.3
RPM1RPM1 ALD3P54114 506 aa13.2□□□□□ -0.3
RPM1RPM1 PUS5Q06244 254 aa13.2□□□□□ -0.3
RPM1RPM1 SLM3Q12093 417 aa13.19□□□□□ -0.3
RPM1RPM1 PAF1P38351 445 aa13.18□□□□□ -0.3
RPM1RPM1 TOM1Q03280 3268 aa13.17□□□□□ -0.3
RPM1RPM1 RPN1P38764 993 aaKnown RBP13.17□□□□□ -0.3
RPM1RPM1 VPS72Q03388 795 aa13.16□□□□□ -0.3
RPM1RPM1 VNX1P42839 908 aa13.14□□□□□ -0.31
RPM1RPM1 YRF1-4O13559 1382 aa13.14□□□□□ -0.31
RPM1RPM1 SSM4P40318 1319 aa13.13□□□□□ -0.31
RPM1RPM1 IKI3Q06706 1349 aaKnown RBP13.13□□□□□ -0.31
RPM1RPM1 GIN4Q12263 1142 aa13.12□□□□□ -0.31
RPM1RPM1 ASF1P32447 279 aa13.11□□□□□ -0.31
RPM1RPM1 TAF8Q03750 510 aa13.11□□□□□ -0.31
RPM1RPM1 NUG1P40010 520 aaKnown RBP13.09□□□□□ -0.31
RPM1RPM1 ENP1P38333 483 aaKnown RBP13.08□□□□□ -0.32
RPM1RPM1 SAP155P43612 1002 aa13.07□□□□□ -0.32
RPM1RPM1 SQS1P53866 767 aaKnown RBP13.06□□□□□ -0.32
RPM1RPM1 CTT1P06115 562 aa13.04□□□□□ -0.32
RPM1RPM1 OXP1P28273 1286 aa13.04□□□□□ -0.32
RPM1RPM1 SPP1Q03012 353 aa13.04□□□□□ -0.32
RPM1RPM1 NSR1P27476 414 aaKnown RBP RIP-Chip data13.03□□□□□ -0.32not detected
RPM1RPM1 XKS1P42826 600 aa13.03□□□□□ -0.32
RPM1RPM1 NOP7P53261 605 aaKnown RBP13.03□□□□□ -0.32
RPM1RPM1 TOS1P38288 455 aa13.02□□□□□ -0.33
RPM1RPM1 MSN5P52918 1224 aa13.02□□□□□ -0.33
RPM1RPM1 SWE1P32944 819 aa13.01□□□□□ -0.33
RPM1RPM1 YER156CP40093 338 aaKnown RBP13.01□□□□□ -0.33
RPM1RPM1 DUS1P53759 423 aaKnown RBP13□□□□□ -0.33
RPM1RPM1 MHP1P43638 1398 aa12.99□□□□□ -0.33
RPM1RPM1 MSB4Q12317 492 aa12.99□□□□□ -0.33
RPM1RPM1 APC1P53886 1748 aa12.99□□□□□ -0.33
RPM1RPM1 PRP43P53131 767 aaKnown RBP12.98□□□□□ -0.33
RPM1RPM1 CWC22P53333 577 aaKnown RBP12.98□□□□□ -0.33
RPM1RPM1 KIN4Q01919 800 aa12.97□□□□□ -0.33
RPM1RPM1 BUG1Q12191 341 aa12.96□□□□□ -0.33
RPM1RPM1 YML020WQ03722 664 aa12.95□□□□□ -0.34
RPM1RPM1 WSC3Q12215 556 aa12.95□□□□□ -0.34
RPM1RPM1 FRK1Q03002 865 aaPredicted RBP12.94□□□□□ -0.34
RPM1RPM1 HIF1Q12373 385 aa12.94□□□□□ -0.34
RPM1RPM1 YIL177CP40434 1758 aa12.94□□□□□ -0.34
RPM1RPM1 YJL225CP40889 1758 aa12.94□□□□□ -0.34
RPM1RPM1 YAP5P40574 245 aa12.93□□□□□ -0.34
RPM1RPM1 AIR2Q12476 344 aaKnown RBP12.93□□□□□ -0.34
RPM1RPM1 CHZ1P40019 153 aaPredicted RBP12.92□□□□□ -0.34
RPM1RPM1 UTP22P53254 1237 aaPredicted RBP12.92□□□□□ -0.34
RPM1RPM1 TOA1P32773 286 aa12.91□□□□□ -0.34
RPM1RPM1 CSE4P36012 229 aa12.91□□□□□ -0.34
RPM1RPM1 YLR419WQ06698 1435 aaKnown RBP12.9□□□□□ -0.34
RPM1RPM1 DEF1P35732 738 aaKnown RBP12.9□□□□□ -0.34
RPM1RPM1 YKL222CP35995 705 aa12.9□□□□□ -0.34
RPM1RPM1 ESL2P36168 1195 aa12.9□□□□□ -0.34
RPM1RPM1 ERT1P38140 529 aa12.9□□□□□ -0.34
RPM1RPM1 RTS3P53289 263 aa12.9□□□□□ -0.34
RPM1RPM1 RPS24AP0CX31 135 aaKnown RBP12.89□□□□□ -0.35
RPM1RPM1 RPS24BP0CX32 135 aaKnown RBP12.89□□□□□ -0.35
RPM1RPM1 YJL171CP46992 396 aa12.88□□□□□ -0.35
RPM1RPM1 FPK1P53739 893 aa12.88□□□□□ -0.35
RPM1RPM1 HPC2Q01448 625 aa12.88□□□□□ -0.35
RPM1RPM1 POM152P39685 1337 aa12.88□□□□□ -0.35
RPM1RPM1 SDH2P21801 266 aa12.86□□□□□ -0.35
RPM1RPM1 ETP1P38748 585 aaKnown RBP12.86□□□□□ -0.35
RPM1RPM1 CWH41P53008 833 aa12.86□□□□□ -0.35
RPM1RPM1 MEC3Q02574 474 aa12.86□□□□□ -0.35
RPM1RPM1 RAD4P14736 754 aa12.85□□□□□ -0.35
RPM1RPM1 GRE2Q12068 342 aaKnown RBP12.85□□□□□ -0.35
RPM1RPM1 RIM15P43565 1770 aa12.84□□□□□ -0.35
RPM1RPM1 LEU2P04173 364 aaPredicted RBP12.84□□□□□ -0.35
RPM1RPM1 OSW7P43611 510 aa12.84□□□□□ -0.35
RPM1RPM1 MTR4P47047 1073 aaKnown RBP12.84□□□□□ -0.35
RPM1RPM1 ADE16P54113 591 aaKnown RBP12.84□□□□□ -0.35
RPM1RPM1 RLP24Q07915 199 aaKnown RBP12.83□□□□□ -0.36
RPM1RPM1 MAC1P35192 417 aa12.82□□□□□ -0.36
RPM1RPM1 FKH1P40466 484 aa12.82□□□□□ -0.36
RPM1RPM1 BBC1P47068 1157 aa12.82□□□□□ -0.36
RPM1RPM1 NOP8Q08287 484 aaPredicted RBP12.82□□□□□ -0.36
RPM1RPM1 FPR3P38911 411 aaKnown RBP12.81□□□□□ -0.36
RPM1RPM1 BRN1P38170 754 aa12.8□□□□□ -0.36
RPM1RPM1 TIF11P38912 153 aaKnown RBP12.8□□□□□ -0.36
RPM1RPM1 NAB3P38996 802 aaKnown RBP RIP-Chip data12.8□□□□□ -0.36not detected
RPM1RPM1 RPO41P13433 1351 aaKnown RBP12.8□□□□□ -0.36
RPM1RPM1 RRT14P40470 206 aa12.79□□□□□ -0.36
RPM1RPM1 RIX7Q07844 837 aaKnown RBP12.79□□□□□ -0.36
RPM1RPM1 NYV1Q12255 253 aa12.78□□□□□ -0.36
RPM1RPM1 YLR278CQ05854 1341 aa12.78□□□□□ -0.36
RPM1RPM1 RPS0AP32905 252 aaKnown RBP12.77□□□□□ -0.37
RPM1RPM1 RCR1P38212 213 aa12.77□□□□□ -0.37
RPM1RPM1 SLI15P38283 698 aa12.77□□□□□ -0.37
RPM1RPM1 SIR4P11978 1358 aa12.76□□□□□ -0.37
RPM1RPM1 PSH1Q12161 406 aa12.75□□□□□ -0.37
RPM1RPM1 THS1P04801 734 aaKnown RBP12.72□□□□□ -0.37
RPM1RPM1 ATG13Q06628 738 aa12.72□□□□□ -0.37
RPM1RPM1 RET1P22276 1149 aaKnown RBP12.71□□□□□ -0.37
RPM1RPM1 AI2P03876 854 aa12.7□□□□□ -0.38
RPM1RPM1 ATG36P46983 293 aa12.7□□□□□ -0.38
RPM1RPM1 TPO2P53283 614 aa12.7□□□□□ -0.38
RPM1RPM1 YLL066CQ99208 1374 aa12.69□□□□□ -0.38
RPM1RPM1 SPE2P21182 396 aa12.69□□□□□ -0.38
RPM1RPM1 GRX1P25373 110 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms