RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
PHGDH-212ENST00000641247 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
PHGDH-212ENST00000641247 TNRQ92752 1358 aa16.02■□□□□ 0.16
PHGDH-212ENST00000641247 INO80Q9ULG1 1556 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-212ENST00000641247 NPHP4O75161 1426 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-212ENST00000641247 THEMISQ8N1K5 641 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-212ENST00000641247 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
PHGDH-212ENST00000641247 MBD5Q9P267 1494 aa15.97■□□□□ 0.15
PHGDH-212ENST00000641247 KIF3BO15066 747 aa15.97■□□□□ 0.15
PHGDH-212ENST00000641247 LRRC7Q96NW7 1537 aa15.97■□□□□ 0.15
PHGDH-212ENST00000641247 MED14O60244 1454 aa15.97■□□□□ 0.15
PHGDH-212ENST00000641247 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
PHGDH-212ENST00000641247 POTEAQ6S8J7 498 aa15.96■□□□□ 0.15
PHGDH-212ENST00000641247 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
PHGDH-212ENST00000641247 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
PHGDH-212ENST00000641247 PZPP20742 1482 aa15.94■□□□□ 0.14
PHGDH-212ENST00000641247 WASHC2CQ9Y4E1 1318 aa15.93■□□□□ 0.14
PHGDH-212ENST00000641247 POLR1AO95602 1720 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-212ENST00000641247 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
PHGDH-212ENST00000641247 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
PHGDH-212ENST00000641247 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
PHGDH-212ENST00000641247 UGGT1Q9NYU2 1555 aa15.9■□□□□ 0.14
PHGDH-212ENST00000641247 ADGBQ8N7X0 1667 aa15.89■□□□□ 0.13
PHGDH-212ENST00000641247 NLRP1Q9C000 1473 aa15.88■□□□□ 0.13
PHGDH-212ENST00000641247 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
PHGDH-212ENST00000641247 LTKP29376 864 aa15.87■□□□□ 0.13
PHGDH-212ENST00000641247 KDM5DQ9BY66 1539 aa15.87■□□□□ 0.13
PHGDH-212ENST00000641247 DEPDC5O75140 1603 aa15.86■□□□□ 0.13
PHGDH-212ENST00000641247 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
PHGDH-212ENST00000641247 MTUS2Q5JR59 1369 aa15.84■□□□□ 0.13
PHGDH-212ENST00000641247 IQGAP1P46940 1657 aa15.83■□□□□ 0.13
PHGDH-212ENST00000641247 TIAM1Q13009 1591 aa15.83■□□□□ 0.12
PHGDH-212ENST00000641247 RNF17Q9BXT8 1623 aaKnown RBP15.83■□□□□ 0.12
PHGDH-212ENST00000641247 FAM135BQ49AJ0 1406 aa15.8■□□□□ 0.12
PHGDH-212ENST00000641247 RBM33Q96EV2 1170 aaKnown RBP15.8■□□□□ 0.12
PHGDH-212ENST00000641247 NCOA2Q15596 1464 aa15.79■□□□□ 0.12
PHGDH-212ENST00000641247 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
PHGDH-212ENST00000641247 ZC3H13Q5T200 1668 aaKnown RBP15.78■□□□□ 0.12
PHGDH-212ENST00000641247 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
PHGDH-212ENST00000641247 SYNMO15061 1565 aa15.77■□□□□ 0.11
PHGDH-212ENST00000641247 ERVK-7P63135 1459 aa15.77■□□□□ 0.11
PHGDH-212ENST00000641247 ABCC3O15438 1527 aa15.76■□□□□ 0.11
PHGDH-212ENST00000641247 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
PHGDH-212ENST00000641247 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
PHGDH-212ENST00000641247 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
PHGDH-212ENST00000641247 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
PHGDH-212ENST00000641247 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
PHGDH-212ENST00000641247 XIRP1Q702N8 1843 aaKnown RBP15.73■□□□□ 0.11
PHGDH-212ENST00000641247 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
PHGDH-212ENST00000641247 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
PHGDH-212ENST00000641247 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
PHGDH-212ENST00000641247 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
PHGDH-212ENST00000641247 SETD1AO15047 1707 aaKnown RBP15.71■□□□□ 0.1
PHGDH-212ENST00000641247 SLIT1O75093 1534 aa15.69■□□□□ 0.1
PHGDH-212ENST00000641247 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
PHGDH-212ENST00000641247 UBR1Q8IWV7 1749 aa15.69■□□□□ 0.1
PHGDH-212ENST00000641247 KCNA6P17658 529 aa15.69■□□□□ 0.1
PHGDH-212ENST00000641247 PROSER2Q86WR7 435 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-212ENST00000641247 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
PHGDH-212ENST00000641247 MROH1Q8NDA8 1641 aa15.68■□□□□ 0.1
PHGDH-212ENST00000641247 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
PHGDH-212ENST00000641247 TMEM2Q9UHN6 1383 aa15.66■□□□□ 0.1
PHGDH-212ENST00000641247 EID1Q9Y6B2 187 aa15.66■□□□□ 0.1
PHGDH-212ENST00000641247 ROBO1Q9Y6N7 1651 aa15.66■□□□□ 0.1
PHGDH-212ENST00000641247 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.09
PHGDH-212ENST00000641247 TRIM52Q96A61 297 aa15.64■□□□□ 0.09
PHGDH-212ENST00000641247 SLAIN2Q9P270 581 aa15.64■□□□□ 0.09
PHGDH-212ENST00000641247 IDI1Q13907 227 aa15.63■□□□□ 0.09
PHGDH-212ENST00000641247 JCADQ9P266 1359 aa15.62■□□□□ 0.09
PHGDH-212ENST00000641247 LRP6O75581 1613 aa15.62■□□□□ 0.09
PHGDH-212ENST00000641247 TET3O43151 1660 aa15.61■□□□□ 0.09
PHGDH-212ENST00000641247 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
PHGDH-212ENST00000641247 PRDM15P57071 1507 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-212ENST00000641247 CEP152O94986 1710 aa15.58■□□□□ 0.08
PHGDH-212ENST00000641247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.085e-16■■□□□ 13.6
PHGDH-212ENST00000641247 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.08
PHGDH-212ENST00000641247 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.08
PHGDH-212ENST00000641247 PIK3C2BO00750 1634 aa15.57■□□□□ 0.08
PHGDH-212ENST00000641247 CFAP65Q6ZU64 1925 aaKnown RBP15.57■□□□□ 0.08
PHGDH-212ENST00000641247 MSH6P52701 1360 aa15.56■□□□□ 0.08
PHGDH-212ENST00000641247 EIF2AK4Q9P2K8 1649 aaKnown RBP15.55■□□□□ 0.08
PHGDH-212ENST00000641247 LRRC9Q6ZRR7 1453 aa15.55■□□□□ 0.08
PHGDH-212ENST00000641247 KANK4Q5T7N3 995 aaPredicted RBP15.55■□□□□ 0.08
PHGDH-212ENST00000641247 ZNF772Q68DY9 489 aaPredicted RBP15.55■□□□□ 0.08
PHGDH-212ENST00000641247 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
PHGDH-212ENST00000641247 SPATA31A6Q5VVP1 1343 aa15.53■□□□□ 0.08
PHGDH-212ENST00000641247 RXRBP28702 533 aa15.53■□□□□ 0.08
PHGDH-212ENST00000641247 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
PHGDH-212ENST00000641247 COL16A1Q07092 1604 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-212ENST00000641247 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
PHGDH-212ENST00000641247 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.08
PHGDH-212ENST00000641247 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.07
PHGDH-212ENST00000641247 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.07
PHGDH-212ENST00000641247 NWD1Q149M9 1564 aa15.51■□□□□ 0.07
PHGDH-212ENST00000641247 BCANQ96GW7 911 aa15.51■□□□□ 0.07
PHGDH-212ENST00000641247 KIF15Q9NS87 1388 aa15.5■□□□□ 0.07
PHGDH-212ENST00000641247 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
PHGDH-212ENST00000641247 NUTM2BA6NNL0 878 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-212ENST00000641247 NUTM2EB1AL46 878 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-212ENST00000641247 NUTM2AQ8IVF1 878 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms