RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 KIF15Q9NS87 1388 aa34.72■■■■□ 3.15
GRAMD1B-217ENST00000640939 DUOX2Q9NRD8 1548 aa34.71■■■■□ 3.15
GRAMD1B-217ENST00000640939 UHRF1BP1Q6BDS2 1440 aa34.71■■■■□ 3.15
GRAMD1B-217ENST00000640939 EIF2AK4Q9P2K8 1649 aaKnown RBP34.69■■■■□ 3.14
GRAMD1B-217ENST00000640939 RNF17Q9BXT8 1623 aaKnown RBP34.67■■■■□ 3.14
GRAMD1B-217ENST00000640939 KDM5DQ9BY66 1539 aa34.67■■■■□ 3.14
GRAMD1B-217ENST00000640939 NPATQ14207 1427 aa34.66■■■■□ 3.14
GRAMD1B-217ENST00000640939 WASHC2CQ9Y4E1 1318 aa34.65■■■■□ 3.14
GRAMD1B-217ENST00000640939 PTPRKQ15262 1439 aa34.64■■■■□ 3.14
GRAMD1B-217ENST00000640939 ANKRD30AQ9BXX3 1397 aa34.63■■■■□ 3.13
GRAMD1B-217ENST00000640939 FAM135AQ9P2D6 1515 aa34.62■■■■□ 3.13
GRAMD1B-217ENST00000640939 ERBINQ96RT1 1412 aa34.6■■■■□ 3.13
GRAMD1B-217ENST00000640939 MROH1Q8NDA8 1641 aa34.59■■■■□ 3.13
GRAMD1B-217ENST00000640939 NCOA1Q15788 1441 aa34.59■■■■□ 3.13
GRAMD1B-217ENST00000640939 ADGRL2O95490 1459 aa34.56■■■■□ 3.12
GRAMD1B-217ENST00000640939 ABCC3O15438 1527 aa34.55■■■■□ 3.12
GRAMD1B-217ENST00000640939 FBXO31Q5XUX0 539 aaPredicted RBP34.53■■■■□ 3.12
GRAMD1B-217ENST00000640939 PZPP20742 1482 aa34.52■■■■□ 3.12
GRAMD1B-217ENST00000640939 MYO3AQ8NEV4 1616 aa34.52■■■■□ 3.12
GRAMD1B-217ENST00000640939 ZC3H13Q5T200 1668 aaKnown RBP34.51■■■■□ 3.12
GRAMD1B-217ENST00000640939 CEP152O94986 1710 aa34.5■■■■□ 3.11
GRAMD1B-217ENST00000640939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.48■■■■□ 3.11
GRAMD1B-217ENST00000640939 PRDM15P57071 1507 aaPredicted RBP34.48■■■■□ 3.11
GRAMD1B-217ENST00000640939 ITGAEP38570 1179 aa34.47■■■■□ 3.11
GRAMD1B-217ENST00000640939 DEPDC5O75140 1603 aa34.46■■■■□ 3.11
GRAMD1B-217ENST00000640939 STRCQ7RTU9 1775 aa34.46■■■■□ 3.11
GRAMD1B-217ENST00000640939 TNRQ92752 1358 aa34.45■■■■□ 3.11
GRAMD1B-217ENST00000640939 ZNF142P52746 1687 aaPredicted RBP34.44■■■■□ 3.1
GRAMD1B-217ENST00000640939 CEP170BQ9Y4F5 1589 aaPredicted RBP34.44■■■■□ 3.1
GRAMD1B-217ENST00000640939 CAMSAP1Q5T5Y3 1602 aa34.43■■■■□ 3.1
GRAMD1B-217ENST00000640939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.42■■■■□ 3.1
GRAMD1B-217ENST00000640939 ANKRD50Q9ULJ7 1429 aa34.39■■■■□ 3.1
GRAMD1B-217ENST00000640939 RRBP1Q9P2E9 1410 aaKnown RBP34.38■■■■□ 3.09
GRAMD1B-217ENST00000640939 KANK1Q14678 1352 aa34.37■■■■□ 3.09
GRAMD1B-217ENST00000640939 A2ML1A8K2U0 1454 aa34.37■■■■□ 3.09
GRAMD1B-217ENST00000640939 ROCK1Q13464 1354 aa34.36■■■■□ 3.09
GRAMD1B-217ENST00000640939 CFAP65Q6ZU64 1925 aaKnown RBP34.35■■■■□ 3.09
GRAMD1B-217ENST00000640939 ERVK-7P63135 1459 aa34.33■■■■□ 3.09
GRAMD1B-217ENST00000640939 SPATA31D1Q6ZQQ2 1576 aa34.32■■■■□ 3.09
GRAMD1B-217ENST00000640939 VWDEQ8N2E2 1590 aa34.32■■■■□ 3.08
GRAMD1B-217ENST00000640939 DMRT2Q9Y5R5 561 aa34.3■■■■□ 3.08
GRAMD1B-217ENST00000640939 ARHGAP31Q2M1Z3 1444 aa34.28■■■■□ 3.08
GRAMD1B-217ENST00000640939 NCKAP5LQ9HCH0 1330 aa34.28■■■■□ 3.08
GRAMD1B-217ENST00000640939 NLRP1Q9C000 1473 aa34.27■■■■□ 3.08
GRAMD1B-217ENST00000640939 LMTK2Q8IWU2 1503 aa34.27■■■■□ 3.08
GRAMD1B-217ENST00000640939 PLA2R1Q13018 1463 aa34.25■■■■□ 3.07
GRAMD1B-217ENST00000640939 PTPRTO14522 1441 aa34.23■■■■□ 3.07
GRAMD1B-217ENST00000640939 UNC13BO14795 1591 aa34.2■■■■□ 3.07
GRAMD1B-217ENST00000640939 UGGT1Q9NYU2 1555 aa34.19■■■■□ 3.06
GRAMD1B-217ENST00000640939 EFCAB6Q5THR3 1501 aa34.19■■■■□ 3.06
GRAMD1B-217ENST00000640939 PKD2Q13563 968 aa34.17■■■■□ 3.06
GRAMD1B-217ENST00000640939 THEMISQ8N1K5 641 aaPredicted RBP34.15■■■■□ 3.06
GRAMD1B-217ENST00000640939 ILDR1Q86SU0 546 aaPredicted RBP34.11■■■■□ 3.05
GRAMD1B-217ENST00000640939 TET3O43151 1660 aa34.11■■■■□ 3.05
GRAMD1B-217ENST00000640939 POLR1AO95602 1720 aaPredicted RBP34.1■■■■□ 3.05
GRAMD1B-217ENST00000640939 UBR1Q8IWV7 1749 aa34.08■■■■□ 3.05
GRAMD1B-217ENST00000640939 SYNMO15061 1565 aa34.06■■■■□ 3.04
GRAMD1B-217ENST00000640939 GCC2Q8IWJ2 1684 aa34.06■■■■□ 3.04
GRAMD1B-217ENST00000640939 IQGAP3Q86VI3 1631 aa34.06■■■■□ 3.04
GRAMD1B-217ENST00000640939 NUP155O75694 1391 aa34.06■■■■□ 3.04
GRAMD1B-217ENST00000640939 NOS1P29475 1434 aa34.05■■■■□ 3.04
GRAMD1B-217ENST00000640939 ANKLE2Q86XL3 938 aa34.05■■■■□ 3.04
GRAMD1B-217ENST00000640939 NEURL4Q96JN8 1562 aa34.05■■■■□ 3.04
GRAMD1B-217ENST00000640939 PIK3C2BO00750 1634 aa34.04■■■■□ 3.04
GRAMD1B-217ENST00000640939 CERKQ8TCT0 537 aa34.04■■■■□ 3.04
GRAMD1B-217ENST00000640939 NAIPQ13075 1403 aa34.04■■■■□ 3.04
GRAMD1B-217ENST00000640939 RPRD2Q5VT52 1461 aaKnown RBP34.03■■■■□ 3.04
GRAMD1B-217ENST00000640939 IDI1Q13907 227 aa34■■■■□ 3.03
GRAMD1B-217ENST00000640939 E9PCH4 1651 aa33.99■■■■□ 3.03
GRAMD1B-217ENST00000640939 STAG3Q9UJ98 1225 aa33.97■■■■□ 3.03
GRAMD1B-217ENST00000640939 LTBP4Q8N2S1 1624 aa33.97■■■■□ 3.03
GRAMD1B-217ENST00000640939 ZNF335Q9H4Z2 1342 aaPredicted RBP33.96■■■■□ 3.03
GRAMD1B-217ENST00000640939 HFM1A2PYH4 1435 aa33.96■■■■□ 3.03
GRAMD1B-217ENST00000640939 FBXO41Q8TF61 875 aa33.95■■■■□ 3.03
GRAMD1B-217ENST00000640939 NPHP4O75161 1426 aaPredicted RBP33.94■■■■□ 3.02
GRAMD1B-217ENST00000640939 MED14O60244 1454 aa33.92■■■■□ 3.02
GRAMD1B-217ENST00000640939 ARHGAP23Q9P227 1491 aa33.91■■■■□ 3.02
GRAMD1B-217ENST00000640939 SLC52A1Q9NWF4 448 aa33.91■■■■□ 3.02
GRAMD1B-217ENST00000640939 SLIT1O75093 1534 aa33.9■■■■□ 3.02
GRAMD1B-217ENST00000640939 KDM5AP29375 1690 aaKnown RBP33.9■■■■□ 3.02
GRAMD1B-217ENST00000640939 IQGAP1P46940 1657 aa33.89■■■■□ 3.02
GRAMD1B-217ENST00000640939 ADGRB3O60242 1522 aa33.89■■■■□ 3.02
GRAMD1B-217ENST00000640939 LTKP29376 864 aa33.88■■■■□ 3.01
GRAMD1B-217ENST00000640939 SCAF11Q99590 1463 aaKnown RBP33.88■■■■□ 3.01
GRAMD1B-217ENST00000640939 TXNDC2Q86VQ3 553 aa33.87■■■■□ 3.01
GRAMD1B-217ENST00000640939 TMEM2Q9UHN6 1383 aa33.86■■■■□ 3.01
GRAMD1B-217ENST00000640939 TRIM52Q96A61 297 aa33.83■■■■□ 3.01
GRAMD1B-217ENST00000640939 EID1Q9Y6B2 187 aa33.83■■■■□ 3.01
GRAMD1B-217ENST00000640939 MYO5BQ9ULV0 1848 aa33.81■■■■□ 3
GRAMD1B-217ENST00000640939 CHGAP10645 457 aaKnown RBP33.77■■■■□ 3
GRAMD1B-217ENST00000640939 TMEM131LA2VDJ0 1609 aa33.77■■■■□ 3
GRAMD1B-217ENST00000640939 SPHKAPQ2M3C7 1700 aa33.76■■■□□ 2.99
GRAMD1B-217ENST00000640939 IQSEC2Q5JU85 1478 aa33.7■■■□□ 2.99
GRAMD1B-217ENST00000640939 SLC4A1APQ9BWU0 796 aaKnown RBP33.68■■■□□ 2.98
GRAMD1B-217ENST00000640939 ZFYVE9O95405 1425 aa33.68■■■□□ 2.98
GRAMD1B-217ENST00000640939 RIMS2Q9UQ26 1411 aa33.68■■■□□ 2.98
GRAMD1B-217ENST00000640939 CPS1P31327 1500 aa33.68■■■□□ 2.98
GRAMD1B-217ENST00000640939 STRCP1A6NGW2 1772 aa33.65■■■□□ 2.98
GRAMD1B-217ENST00000640939 SENP3Q9H4L4 574 aaPredicted RBP33.65■■■□□ 2.98
GRAMD1B-217ENST00000640939 TRPM2O94759 1503 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms