RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
KCNMA1-288ENST00000640773 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
KCNMA1-288ENST00000640773 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
KCNMA1-288ENST00000640773 C3P01024 1663 aa12.8□□□□□ -0.36
KCNMA1-288ENST00000640773 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-288ENST00000640773 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
KCNMA1-288ENST00000640773 CFDP1Q9UEE9 299 aaPredicted RBP12.77□□□□□ -0.36
KCNMA1-288ENST00000640773 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
KCNMA1-288ENST00000640773 A2MP01023 1474 aa12.76□□□□□ -0.37
KCNMA1-288ENST00000640773 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
KCNMA1-288ENST00000640773 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
KCNMA1-288ENST00000640773 NCOA1Q15788 1441 aa12.75□□□□□ -0.37
KCNMA1-288ENST00000640773 ERBINQ96RT1 1412 aa12.75□□□□□ -0.37
KCNMA1-288ENST00000640773 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-288ENST00000640773 ZNF142P52746 1687 aaPredicted RBP12.74□□□□□ -0.37
KCNMA1-288ENST00000640773 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
KCNMA1-288ENST00000640773 CLTCQ00610 1675 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-288ENST00000640773 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
KCNMA1-288ENST00000640773 DHX29Q7Z478 1369 aaKnown RBP12.73□□□□□ -0.37
KCNMA1-288ENST00000640773 IQGAP3Q86VI3 1631 aa12.73□□□□□ -0.37
KCNMA1-288ENST00000640773 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.37
KCNMA1-288ENST00000640773 MIER1Q8N108 512 aa12.73□□□□□ -0.37
KCNMA1-288ENST00000640773 CEP152O94986 1710 aa12.72□□□□□ -0.37
KCNMA1-288ENST00000640773 KDM5AP29375 1690 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-288ENST00000640773 CAMSAP1Q5T5Y3 1602 aa12.72□□□□□ -0.37
KCNMA1-288ENST00000640773 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
KCNMA1-288ENST00000640773 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.38
KCNMA1-288ENST00000640773 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
KCNMA1-288ENST00000640773 ABCC3O15438 1527 aa12.68□□□□□ -0.38
KCNMA1-288ENST00000640773 TET3O43151 1660 aa12.67□□□□□ -0.38
KCNMA1-288ENST00000640773 PTPRMP28827 1452 aa12.67□□□□□ -0.38
KCNMA1-288ENST00000640773 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
KCNMA1-288ENST00000640773 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
KCNMA1-288ENST00000640773 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-288ENST00000640773 E9PCH4 1651 aa12.65□□□□□ -0.38
KCNMA1-288ENST00000640773 ARHGAP31Q2M1Z3 1444 aa12.65□□□□□ -0.39
KCNMA1-288ENST00000640773 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
KCNMA1-288ENST00000640773 HFM1A2PYH4 1435 aa12.64□□□□□ -0.39
KCNMA1-288ENST00000640773 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
KCNMA1-288ENST00000640773 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
KCNMA1-288ENST00000640773 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
KCNMA1-288ENST00000640773 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
KCNMA1-288ENST00000640773 NAIPQ13075 1403 aa12.63□□□□□ -0.39
KCNMA1-288ENST00000640773 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
KCNMA1-288ENST00000640773 SETD1BQ9UPS6 1966 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-288ENST00000640773 NPATQ14207 1427 aa12.61□□□□□ -0.39
KCNMA1-288ENST00000640773 PZPP20742 1482 aa12.61□□□□□ -0.39
KCNMA1-288ENST00000640773 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
KCNMA1-288ENST00000640773 RBM19Q9Y4C8 960 aaKnown RBP12.6□□□□□ -0.39
KCNMA1-288ENST00000640773 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
KCNMA1-288ENST00000640773 SYNMO15061 1565 aa12.59□□□□□ -0.39
KCNMA1-288ENST00000640773 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
KCNMA1-288ENST00000640773 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.4
KCNMA1-288ENST00000640773 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
KCNMA1-288ENST00000640773 ZNF777Q9ULD5 760 aaPredicted RBP12.58□□□□□ -0.4
KCNMA1-288ENST00000640773 RPRD2Q5VT52 1461 aaKnown RBP12.58□□□□□ -0.4
KCNMA1-288ENST00000640773 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
KCNMA1-288ENST00000640773 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
KCNMA1-288ENST00000640773 ANKRD50Q9ULJ7 1429 aa12.56□□□□□ -0.4
KCNMA1-288ENST00000640773 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-288ENST00000640773 NOS1P29475 1434 aa12.54□□□□□ -0.4
KCNMA1-288ENST00000640773 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
KCNMA1-288ENST00000640773 POLR1AO95602 1720 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-288ENST00000640773 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
KCNMA1-288ENST00000640773 TSPY4P0CV99 314 aa12.53□□□□□ -0.4
KCNMA1-288ENST00000640773 TSPY10P0CW01 314 aa12.53□□□□□ -0.4
KCNMA1-288ENST00000640773 MSH5O43196 834 aa12.52□□□□□ -0.4
KCNMA1-288ENST00000640773 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-288ENST00000640773 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
KCNMA1-288ENST00000640773 ERVK-7P63135 1459 aa12.52□□□□□ -0.41
KCNMA1-288ENST00000640773 PTPRTO14522 1441 aa12.52□□□□□ -0.41
KCNMA1-288ENST00000640773 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
KCNMA1-288ENST00000640773 CEP170BQ9Y4F5 1589 aaPredicted RBP12.51□□□□□ -0.41
KCNMA1-288ENST00000640773 ZMYM3Q14202 1370 aa12.51□□□□□ -0.41
KCNMA1-288ENST00000640773 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
KCNMA1-288ENST00000640773 TRPM2O94759 1503 aa12.48□□□□□ -0.41
KCNMA1-288ENST00000640773 SLIT1O75093 1534 aa12.47□□□□□ -0.41
KCNMA1-288ENST00000640773 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
KCNMA1-288ENST00000640773 NLRP1Q9C000 1473 aa12.47□□□□□ -0.41
KCNMA1-288ENST00000640773 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
KCNMA1-288ENST00000640773 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
KCNMA1-288ENST00000640773 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.42
KCNMA1-288ENST00000640773 CLTCL1P53675 1640 aa12.45□□□□□ -0.42
KCNMA1-288ENST00000640773 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
KCNMA1-288ENST00000640773 RRP7BPQ9NSQ0 103 aa12.45□□□□□ -0.42
KCNMA1-288ENST00000640773 CFAP65Q6ZU64 1925 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-288ENST00000640773 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-288ENST00000640773 ADGRB3O60242 1522 aa12.44□□□□□ -0.42
KCNMA1-288ENST00000640773 MED14O60244 1454 aa12.43□□□□□ -0.42
KCNMA1-288ENST00000640773 KIF1BO60333 1816 aa12.43□□□□□ -0.42
KCNMA1-288ENST00000640773 PPLO60437 1756 aa12.43□□□□□ -0.42
KCNMA1-288ENST00000640773 KIF3BO15066 747 aa12.42□□□□□ -0.42
KCNMA1-288ENST00000640773 FAM50AQ14320 339 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-288ENST00000640773 SETD5Q9C0A6 1442 aa12.41□□□□□ -0.42
KCNMA1-288ENST00000640773 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
KCNMA1-288ENST00000640773 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
KCNMA1-288ENST00000640773 STRCP1A6NGW2 1772 aa12.39□□□□□ -0.43
KCNMA1-288ENST00000640773 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
KCNMA1-288ENST00000640773 ITGAEP38570 1179 aa12.38□□□□□ -0.43
KCNMA1-288ENST00000640773 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms