RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
KCNMA1-288ENST00000640773 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
KCNMA1-288ENST00000640773 ABCC9O60706 1549 aa17.22■□□□□ 0.35
KCNMA1-288ENST00000640773 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
KCNMA1-288ENST00000640773 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.32
KCNMA1-288ENST00000640773 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
KCNMA1-288ENST00000640773 NACADO15069 1562 aa17■□□□□ 0.31
KCNMA1-288ENST00000640773 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
KCNMA1-288ENST00000640773 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
KCNMA1-288ENST00000640773 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.25
KCNMA1-288ENST00000640773 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
KCNMA1-288ENST00000640773 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
KCNMA1-288ENST00000640773 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
KCNMA1-288ENST00000640773 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
KCNMA1-288ENST00000640773 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
KCNMA1-288ENST00000640773 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
KCNMA1-288ENST00000640773 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
KCNMA1-288ENST00000640773 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
KCNMA1-288ENST00000640773 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
KCNMA1-288ENST00000640773 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
KCNMA1-288ENST00000640773 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
KCNMA1-288ENST00000640773 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
KCNMA1-288ENST00000640773 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
KCNMA1-288ENST00000640773 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
KCNMA1-288ENST00000640773 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
KCNMA1-288ENST00000640773 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
KCNMA1-288ENST00000640773 WIZO95785 1651 aa15.53■□□□□ 0.08
KCNMA1-288ENST00000640773 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
KCNMA1-288ENST00000640773 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
KCNMA1-288ENST00000640773 BAZ1BQ9UIG0 1483 aaKnown RBP15.35■□□□□ 0.05
KCNMA1-288ENST00000640773 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
KCNMA1-288ENST00000640773 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
KCNMA1-288ENST00000640773 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
KCNMA1-288ENST00000640773 CFTRP13569 1480 aa15.12■□□□□ 0.01
KCNMA1-288ENST00000640773 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
KCNMA1-288ENST00000640773 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
KCNMA1-288ENST00000640773 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
KCNMA1-288ENST00000640773 NESP48681 1621 aa15.06■□□□□ 0
KCNMA1-288ENST00000640773 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
KCNMA1-288ENST00000640773 MYT1Q01538 1121 aa15.01□□□□□ -0.01
KCNMA1-288ENST00000640773 WDR62O43379 1518 aa14.95□□□□□ -0.02
KCNMA1-288ENST00000640773 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
KCNMA1-288ENST00000640773 CUX2O14529 1486 aa14.88□□□□□ -0.03
KCNMA1-288ENST00000640773 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
KCNMA1-288ENST00000640773 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
KCNMA1-288ENST00000640773 URB2Q14146 1524 aaKnown RBP14.81□□□□□ -0.04
KCNMA1-288ENST00000640773 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
KCNMA1-288ENST00000640773 HRCP23327 699 aa14.78□□□□□ -0.04
KCNMA1-288ENST00000640773 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
KCNMA1-288ENST00000640773 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
KCNMA1-288ENST00000640773 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
KCNMA1-288ENST00000640773 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
KCNMA1-288ENST00000640773 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
KCNMA1-288ENST00000640773 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
KCNMA1-288ENST00000640773 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
KCNMA1-288ENST00000640773 CUX1P39880 1505 aa14.69□□□□□ -0.06
KCNMA1-288ENST00000640773 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
KCNMA1-288ENST00000640773 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
KCNMA1-288ENST00000640773 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
KCNMA1-288ENST00000640773 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
KCNMA1-288ENST00000640773 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
KCNMA1-288ENST00000640773 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
KCNMA1-288ENST00000640773 EIF4G3O43432 1585 aaKnown RBP14.53□□□□□ -0.08
KCNMA1-288ENST00000640773 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
KCNMA1-288ENST00000640773 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
KCNMA1-288ENST00000640773 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
KCNMA1-288ENST00000640773 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.1
KCNMA1-288ENST00000640773 ZNF608Q9ULD9 1512 aaPredicted RBP14.45□□□□□ -0.1
KCNMA1-288ENST00000640773 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
KCNMA1-288ENST00000640773 SOGA1O94964 1423 aa14.37□□□□□ -0.11
KCNMA1-288ENST00000640773 CHD1O14646 1710 aa14.37□□□□□ -0.11
KCNMA1-288ENST00000640773 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
KCNMA1-288ENST00000640773 TTBK1Q5TCY1 1321 aaPredicted RBP14.33□□□□□ -0.12
KCNMA1-288ENST00000640773 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
KCNMA1-288ENST00000640773 MAGI1Q96QZ7 1491 aaPredicted RBP14.3□□□□□ -0.12
KCNMA1-288ENST00000640773 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
KCNMA1-288ENST00000640773 GRIN2BQ13224 1484 aa14.28□□□□□ -0.12
KCNMA1-288ENST00000640773 CUL7Q14999 1698 aa14.27□□□□□ -0.12
KCNMA1-288ENST00000640773 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.13
KCNMA1-288ENST00000640773 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.13
KCNMA1-288ENST00000640773 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
KCNMA1-288ENST00000640773 PPARGC1BQ86YN6 1023 aaKnown RBP14.24□□□□□ -0.13
KCNMA1-288ENST00000640773 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
KCNMA1-288ENST00000640773 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
KCNMA1-288ENST00000640773 SYNJ2O15056 1496 aa14.21□□□□□ -0.13
KCNMA1-288ENST00000640773 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
KCNMA1-288ENST00000640773 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
KCNMA1-288ENST00000640773 NUP160Q12769 1436 aa14.16□□□□□ -0.14
KCNMA1-288ENST00000640773 IGF1RP08069 1367 aa14.14□□□□□ -0.15
KCNMA1-288ENST00000640773 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
KCNMA1-288ENST00000640773 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
KCNMA1-288ENST00000640773 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
KCNMA1-288ENST00000640773 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
KCNMA1-288ENST00000640773 PRXQ9BXM0 1461 aa14.09□□□□□ -0.15
KCNMA1-288ENST00000640773 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
KCNMA1-288ENST00000640773 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
KCNMA1-288ENST00000640773 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
KCNMA1-288ENST00000640773 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
KCNMA1-288ENST00000640773 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
KCNMA1-288ENST00000640773 KIF21BO75037 1637 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms