RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 PLEKHH2Q8IVE3 1493 aa22.35■■□□□ 1.17
HLA-C-210ENST00000640219 CFDP1Q9UEE9 299 aaPredicted RBP22.35■■□□□ 1.17
HLA-C-210ENST00000640219 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
HLA-C-210ENST00000640219 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
HLA-C-210ENST00000640219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.32■■□□□ 1.16
HLA-C-210ENST00000640219 ADGBQ8N7X0 1667 aa22.31■■□□□ 1.16
HLA-C-210ENST00000640219 THEMISQ8N1K5 641 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-210ENST00000640219 NPHP4O75161 1426 aaPredicted RBP22.3■■□□□ 1.16
HLA-C-210ENST00000640219 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-210ENST00000640219 CCNB3Q8WWL7 1395 aa22.27■■□□□ 1.16
HLA-C-210ENST00000640219 MED14O60244 1454 aa22.27■■□□□ 1.16
HLA-C-210ENST00000640219 PZPP20742 1482 aa22.26■■□□□ 1.15
HLA-C-210ENST00000640219 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
HLA-C-210ENST00000640219 DHX29Q7Z478 1369 aaKnown RBP22.25■■□□□ 1.15
HLA-C-210ENST00000640219 DEPDC5O75140 1603 aa22.24■■□□□ 1.15
HLA-C-210ENST00000640219 LRRC7Q96NW7 1537 aa22.23■■□□□ 1.15
HLA-C-210ENST00000640219 FAM135AQ9P2D6 1515 aa22.23■■□□□ 1.15
HLA-C-210ENST00000640219 KIF3BO15066 747 aa22.23■■□□□ 1.15
HLA-C-210ENST00000640219 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
HLA-C-210ENST00000640219 MIA2Q96PC5 1412 aa22.23■■□□□ 1.15
HLA-C-210ENST00000640219 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
HLA-C-210ENST00000640219 ZNF644Q9H582 1327 aaPredicted RBP22.21■■□□□ 1.15
HLA-C-210ENST00000640219 WASHC2CQ9Y4E1 1318 aa22.21■■□□□ 1.15
HLA-C-210ENST00000640219 RTEL1-TNFRSF6BF6WH68 1400 aa22.21■■□□□ 1.15
HLA-C-210ENST00000640219 KDM5DQ9BY66 1539 aa22.21■■□□□ 1.15
HLA-C-210ENST00000640219 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.15
HLA-C-210ENST00000640219 IQGAP1P46940 1657 aa22.19■■□□□ 1.14
HLA-C-210ENST00000640219 STRCP1A6NGW2 1772 aa22.18■■□□□ 1.14
HLA-C-210ENST00000640219 MBD5Q9P267 1494 aa22.17■■□□□ 1.14
HLA-C-210ENST00000640219 SYNMO15061 1565 aa22.16■■□□□ 1.14
HLA-C-210ENST00000640219 POTEAQ6S8J7 498 aa22.14■■□□□ 1.13
HLA-C-210ENST00000640219 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
HLA-C-210ENST00000640219 TIAM1Q13009 1591 aa22.08■■□□□ 1.13
HLA-C-210ENST00000640219 CCDC141Q6ZP82 1450 aa22.04■■□□□ 1.12
HLA-C-210ENST00000640219 FAM135BQ49AJ0 1406 aa22.04■■□□□ 1.12
HLA-C-210ENST00000640219 ZC3H13Q5T200 1668 aaKnown RBP22.04■■□□□ 1.12
HLA-C-210ENST00000640219 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
HLA-C-210ENST00000640219 SCAF11Q99590 1463 aaKnown RBP22.01■■□□□ 1.11
HLA-C-210ENST00000640219 ERVK-7P63135 1459 aa21.98■■□□□ 1.11
HLA-C-210ENST00000640219 LTKP29376 864 aa21.98■■□□□ 1.11
HLA-C-210ENST00000640219 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
HLA-C-210ENST00000640219 XIRP1Q702N8 1843 aaKnown RBP21.98■■□□□ 1.11
HLA-C-210ENST00000640219 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
HLA-C-210ENST00000640219 ABCC3O15438 1527 aa21.96■■□□□ 1.11
HLA-C-210ENST00000640219 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
HLA-C-210ENST00000640219 UBR1Q8IWV7 1749 aa21.95■■□□□ 1.1
HLA-C-210ENST00000640219 TSPY4P0CV99 314 aa21.95■■□□□ 1.1
HLA-C-210ENST00000640219 TSPY10P0CW01 314 aa21.95■■□□□ 1.1
HLA-C-210ENST00000640219 CAMSAP2Q08AD1 1489 aa21.95■■□□□ 1.1
HLA-C-210ENST00000640219 SETD1AO15047 1707 aaKnown RBP21.94■■□□□ 1.1
HLA-C-210ENST00000640219 NCOA2Q15596 1464 aa21.93■■□□□ 1.1
HLA-C-210ENST00000640219 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
HLA-C-210ENST00000640219 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
HLA-C-210ENST00000640219 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
HLA-C-210ENST00000640219 SLIT1O75093 1534 aa21.91■■□□□ 1.1
HLA-C-210ENST00000640219 TMEM94Q12767 1356 aa21.91■■□□□ 1.1
HLA-C-210ENST00000640219 ROBO1Q9Y6N7 1651 aa21.9■■□□□ 1.1
HLA-C-210ENST00000640219 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
HLA-C-210ENST00000640219 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
HLA-C-210ENST00000640219 UPF1Q92900 1129 aaKnown RBP eCLIP21.86■■□□□ 1.09
HLA-C-210ENST00000640219 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
HLA-C-210ENST00000640219 KCNA6P17658 529 aa21.85■■□□□ 1.09
HLA-C-210ENST00000640219 RBM33Q96EV2 1170 aaKnown RBP21.84■■□□□ 1.09
HLA-C-210ENST00000640219 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.09
HLA-C-210ENST00000640219 JCADQ9P266 1359 aa21.83■■□□□ 1.08
HLA-C-210ENST00000640219 CEP152O94986 1710 aa21.83■■□□□ 1.08
HLA-C-210ENST00000640219 MROH1Q8NDA8 1641 aa21.82■■□□□ 1.08
HLA-C-210ENST00000640219 EIF2AK4Q9P2K8 1649 aaKnown RBP21.82■■□□□ 1.08
HLA-C-210ENST00000640219 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
HLA-C-210ENST00000640219 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
HLA-C-210ENST00000640219 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
HLA-C-210ENST00000640219 PHLPP1O60346 1717 aa21.78■■□□□ 1.08
HLA-C-210ENST00000640219 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
HLA-C-210ENST00000640219 SLC26A8Q96RN1 970 aa21.78■■□□□ 1.08
HLA-C-210ENST00000640219 SLAIN2Q9P270 581 aa21.78■■□□□ 1.08
HLA-C-210ENST00000640219 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
HLA-C-210ENST00000640219 MSH6P52701 1360 aa21.77■■□□□ 1.08
HLA-C-210ENST00000640219 ARHGAP31Q2M1Z3 1444 aa21.77■■□□□ 1.08
HLA-C-210ENST00000640219 PRDM15P57071 1507 aaPredicted RBP21.76■■□□□ 1.07
HLA-C-210ENST00000640219 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
HLA-C-210ENST00000640219 ZNF772Q68DY9 489 aaPredicted RBP21.75■■□□□ 1.07
HLA-C-210ENST00000640219 MEX3CQ5U5Q3 659 aaKnown RBP21.74■■□□□ 1.07
HLA-C-210ENST00000640219 TET3O43151 1660 aa21.72■■□□□ 1.07
HLA-C-210ENST00000640219 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
HLA-C-210ENST00000640219 EFCAB6Q5THR3 1501 aa21.71■■□□□ 1.07
HLA-C-210ENST00000640219 SPATA31A6Q5VVP1 1343 aa21.71■■□□□ 1.07
HLA-C-210ENST00000640219 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.07
HLA-C-210ENST00000640219 LRP6O75581 1613 aa21.7■■□□□ 1.06
HLA-C-210ENST00000640219 IDI1Q13907 227 aa21.69■■□□□ 1.06
HLA-C-210ENST00000640219 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
HLA-C-210ENST00000640219 COL16A1Q07092 1604 aaPredicted RBP21.69■■□□□ 1.06
HLA-C-210ENST00000640219 RXRBP28702 533 aa21.68■■□□□ 1.06
HLA-C-210ENST00000640219 BCANQ96GW7 911 aa21.68■■□□□ 1.06
HLA-C-210ENST00000640219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.06
HLA-C-210ENST00000640219 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
HLA-C-210ENST00000640219 KDM5AP29375 1690 aaKnown RBP21.66■■□□□ 1.06
HLA-C-210ENST00000640219 KANK1Q14678 1352 aa21.62■■□□□ 1.05
HLA-C-210ENST00000640219 KIF15Q9NS87 1388 aa21.62■■□□□ 1.05
HLA-C-210ENST00000640219 ERBINQ96RT1 1412 aa21.61■■□□□ 1.05
HLA-C-210ENST00000640219 CDK12Q9NYV4 1490 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms