RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 XRN1Q8IZH2 1706 aaKnown RBP10.9□□□□□ -0.66
RTTN-215ENST00000639487 PZPP20742 1482 aa10.89□□□□□ -0.67
RTTN-215ENST00000639487 FGD6Q6ZV73 1430 aa10.89□□□□□ -0.67
RTTN-215ENST00000639487 PTPRTO14522 1441 aa10.89□□□□□ -0.67
RTTN-215ENST00000639487 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
RTTN-215ENST00000639487 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
RTTN-215ENST00000639487 ADGRB3O60242 1522 aa10.88□□□□□ -0.67
RTTN-215ENST00000639487 STRCQ7RTU9 1775 aa10.88□□□□□ -0.67
RTTN-215ENST00000639487 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
RTTN-215ENST00000639487 NLRP1Q9C000 1473 aa10.85□□□□□ -0.67
RTTN-215ENST00000639487 ZFYVE9O95405 1425 aa10.85□□□□□ -0.67
RTTN-215ENST00000639487 ADGRL1O94910 1474 aa10.85□□□□□ -0.67
RTTN-215ENST00000639487 DAPK1P53355 1430 aa10.84□□□□□ -0.67
RTTN-215ENST00000639487 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
RTTN-215ENST00000639487 ARHGAP5Q13017 1502 aa10.84□□□□□ -0.67
RTTN-215ENST00000639487 NRXN3Q9Y4C0 1643 aa10.84□□□□□ -0.67
RTTN-215ENST00000639487 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
RTTN-215ENST00000639487 XIRP1Q702N8 1843 aaKnown RBP10.82□□□□□ -0.68
RTTN-215ENST00000639487 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
RTTN-215ENST00000639487 NOS1P29475 1434 aa10.81□□□□□ -0.68
RTTN-215ENST00000639487 MYOM2P54296 1465 aa10.81□□□□□ -0.68
RTTN-215ENST00000639487 SUPT5HO00267 1087 aaKnown RBP10.81□□□□□ -0.68
RTTN-215ENST00000639487 COL17A1Q9UMD9 1497 aaPredicted RBP10.79□□□□□ -0.68
RTTN-215ENST00000639487 DLC1Q96QB1 1528 aa10.79□□□□□ -0.68
RTTN-215ENST00000639487 NCOA3Q9Y6Q9 1424 aa10.78□□□□□ -0.68
RTTN-215ENST00000639487 A2MP01023 1474 aa10.78□□□□□ -0.68
RTTN-215ENST00000639487 PHRF1Q9P1Y6 1649 aaKnown RBP10.78□□□□□ -0.68
RTTN-215ENST00000639487 ABCC5O15440 1437 aa10.77□□□□□ -0.69
RTTN-215ENST00000639487 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.69
RTTN-215ENST00000639487 CEP170BQ9Y4F5 1589 aaPredicted RBP10.77□□□□□ -0.69
RTTN-215ENST00000639487 CPS1P31327 1500 aa10.76□□□□□ -0.69
RTTN-215ENST00000639487 MST1RQ04912 1400 aa10.74□□□□□ -0.69
RTTN-215ENST00000639487 USP32Q8NFA0 1604 aa10.74□□□□□ -0.69
RTTN-215ENST00000639487 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
RTTN-215ENST00000639487 ABCC6O95255 1503 aa10.73□□□□□ -0.69
RTTN-215ENST00000639487 MYO5BQ9ULV0 1848 aa10.73□□□□□ -0.69
RTTN-215ENST00000639487 DHX29Q7Z478 1369 aaKnown RBP10.72□□□□□ -0.69
RTTN-215ENST00000639487 A2ML1A8K2U0 1454 aa10.72□□□□□ -0.69
RTTN-215ENST00000639487 ITSN1Q15811 1721 aa10.72□□□□□ -0.69
RTTN-215ENST00000639487 NCOA1Q15788 1441 aa10.71□□□□□ -0.69
RTTN-215ENST00000639487 ERVK-7P63135 1459 aa10.71□□□□□ -0.7
RTTN-215ENST00000639487 CDK11AQ9UQ88 783 aaPredicted RBP10.7□□□□□ -0.7
RTTN-215ENST00000639487 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
RTTN-215ENST00000639487 CLTCL1P53675 1640 aa10.7□□□□□ -0.7
RTTN-215ENST00000639487 PTPRKQ15262 1439 aa10.69□□□□□ -0.7
RTTN-215ENST00000639487 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
RTTN-215ENST00000639487 KIF1AQ12756 1690 aa10.68□□□□□ -0.7
RTTN-215ENST00000639487 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
RTTN-215ENST00000639487 MARF1Q9Y4F3 1742 aaKnown RBP10.68□□□□□ -0.7
RTTN-215ENST00000639487 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.67□□□□□ -0.7
RTTN-215ENST00000639487 NHSL1Q5SYE7 1610 aa10.66□□□□□ -0.7
RTTN-215ENST00000639487 FAM9AQ8IZU1 332 aaPredicted RBP10.65□□□□□ -0.7
RTTN-215ENST00000639487 NKTRP30414 1462 aaKnown RBP10.64□□□□□ -0.71
RTTN-215ENST00000639487 AKAP12Q02952 1782 aa10.64□□□□□ -0.71
RTTN-215ENST00000639487 WNK3Q9BYP7 1800 aa10.64□□□□□ -0.71
RTTN-215ENST00000639487 TRAPPC8Q9Y2L5 1435 aa10.64□□□□□ -0.71
RTTN-215ENST00000639487 ARHGEF28Q8N1W1 1705 aaKnown RBP10.63□□□□□ -0.71
RTTN-215ENST00000639487 NALCNQ8IZF0 1738 aa10.63□□□□□ -0.71
RTTN-215ENST00000639487 TECPR2O15040 1411 aa10.62□□□□□ -0.71
RTTN-215ENST00000639487 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
RTTN-215ENST00000639487 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
RTTN-215ENST00000639487 NRKQ7Z2Y5 1582 aa10.61□□□□□ -0.71
RTTN-215ENST00000639487 SHPRHQ149N8 1683 aa10.61□□□□□ -0.71
RTTN-215ENST00000639487 LTBP4Q8N2S1 1624 aa10.61□□□□□ -0.71
RTTN-215ENST00000639487 UHRF1BP1Q6BDS2 1440 aa10.61□□□□□ -0.71
RTTN-215ENST00000639487 FMN2Q9NZ56 1722 aa10.61□□□□□ -0.71
RTTN-215ENST00000639487 NAIPQ13075 1403 aa10.61□□□□□ -0.71
RTTN-215ENST00000639487 CICQ96RK0 1608 aaPredicted RBP10.6□□□□□ -0.71
RTTN-215ENST00000639487 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
RTTN-215ENST00000639487 PTPRMP28827 1452 aa10.6□□□□□ -0.71
RTTN-215ENST00000639487 PIK3R4Q99570 1358 aa10.6□□□□□ -0.71
RTTN-215ENST00000639487 ABCA3Q99758 1704 aa10.6□□□□□ -0.71
RTTN-215ENST00000639487 CAMTA1Q9Y6Y1 1673 aa10.59□□□□□ -0.71
RTTN-215ENST00000639487 CDC42BPGQ6DT37 1551 aa10.59□□□□□ -0.71
RTTN-215ENST00000639487 CCNB3Q8WWL7 1395 aa10.59□□□□□ -0.71
RTTN-215ENST00000639487 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.72
RTTN-215ENST00000639487 RGPD3A6NKT7 1758 aaPredicted RBP10.58□□□□□ -0.72
RTTN-215ENST00000639487 RGPD4Q7Z3J3 1758 aa10.58□□□□□ -0.72
RTTN-215ENST00000639487 SCAPERQ9BY12 1400 aa10.57□□□□□ -0.72
RTTN-215ENST00000639487 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
RTTN-215ENST00000639487 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
RTTN-215ENST00000639487 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
RTTN-215ENST00000639487 FAM208AQ9UK61 1670 aaKnown RBP10.56□□□□□ -0.72
RTTN-215ENST00000639487 DCCP43146 1447 aa10.55□□□□□ -0.72
RTTN-215ENST00000639487 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
RTTN-215ENST00000639487 AHDC1Q5TGY3 1603 aaPredicted RBP10.54□□□□□ -0.72
RTTN-215ENST00000639487 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
RTTN-215ENST00000639487 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
RTTN-215ENST00000639487 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
RTTN-215ENST00000639487 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
RTTN-215ENST00000639487 TRPM3Q9HCF6 1732 aaPredicted RBP10.53□□□□□ -0.72
RTTN-215ENST00000639487 ANKRD30AQ9BXX3 1397 aa10.52□□□□□ -0.73
RTTN-215ENST00000639487 SPATA31E1Q6ZUB1 1445 aa10.52□□□□□ -0.73
RTTN-215ENST00000639487 ADGRB1O14514 1584 aa10.52□□□□□ -0.73
RTTN-215ENST00000639487 PLEKHD1A6NEE1 506 aa10.51□□□□□ -0.73
RTTN-215ENST00000639487 PTCH1Q13635 1447 aa10.51□□□□□ -0.73
RTTN-215ENST00000639487 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
RTTN-215ENST00000639487 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
RTTN-215ENST00000639487 ZNF831Q5JPB2 1677 aa10.49□□□□□ -0.73
RTTN-215ENST00000639487 YEATS2Q9ULM3 1422 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms