RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
NECAP1-210ENST00000638237 KDM5CP41229 1560 aa11.87□□□□□ -0.51
NECAP1-210ENST00000638237 PRKRIP1Q9H875 184 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-210ENST00000638237 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
NECAP1-210ENST00000638237 IRX6P78412 446 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-210ENST00000638237 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
NECAP1-210ENST00000638237 ARHGEF12Q9NZN5 1544 aa11.85□□□□□ -0.51
NECAP1-210ENST00000638237 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
NECAP1-210ENST00000638237 CLASP1Q7Z460 1538 aa11.85□□□□□ -0.51
NECAP1-210ENST00000638237 DCAF11Q8TEB1 546 aa11.85□□□□□ -0.51
NECAP1-210ENST00000638237 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
NECAP1-210ENST00000638237 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-210ENST00000638237 RGL3Q3MIN7 710 aa11.83□□□□□ -0.52
NECAP1-210ENST00000638237 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
NECAP1-210ENST00000638237 CARD11Q9BXL7 1154 aa11.83□□□□□ -0.52
NECAP1-210ENST00000638237 RALGAPBQ86X10 1494 aa11.82□□□□□ -0.52
NECAP1-210ENST00000638237 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
NECAP1-210ENST00000638237 UNC13BO14795 1591 aa11.81□□□□□ -0.52
NECAP1-210ENST00000638237 ZBED9Q6R2W3 1325 aa11.81□□□□□ -0.52
NECAP1-210ENST00000638237 MAST1Q9Y2H9 1570 aa11.81□□□□□ -0.52
NECAP1-210ENST00000638237 UHRF1BP1Q6BDS2 1440 aa11.8□□□□□ -0.52
NECAP1-210ENST00000638237 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
NECAP1-210ENST00000638237 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
NECAP1-210ENST00000638237 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
NECAP1-210ENST00000638237 CCDC144AA2RUR9 1427 aa11.79□□□□□ -0.52
NECAP1-210ENST00000638237 PLA2R1Q13018 1463 aa11.79□□□□□ -0.52
NECAP1-210ENST00000638237 TRAPPC8Q9Y2L5 1435 aa11.79□□□□□ -0.52
NECAP1-210ENST00000638237 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
NECAP1-210ENST00000638237 ADRA2BP18089 450 aa11.78□□□□□ -0.52
NECAP1-210ENST00000638237 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
NECAP1-210ENST00000638237 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
NECAP1-210ENST00000638237 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.52
NECAP1-210ENST00000638237 ABCC1P33527 1531 aa11.77□□□□□ -0.52
NECAP1-210ENST00000638237 PLCH2O75038 1416 aa11.77□□□□□ -0.52
NECAP1-210ENST00000638237 TRPM1Q7Z4N2 1603 aa11.77□□□□□ -0.53
NECAP1-210ENST00000638237 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
NECAP1-210ENST00000638237 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
NECAP1-210ENST00000638237 A2MP01023 1474 aa11.75□□□□□ -0.53
NECAP1-210ENST00000638237 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
NECAP1-210ENST00000638237 PRAG1Q86YV5 1406 aa11.75□□□□□ -0.53
NECAP1-210ENST00000638237 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
NECAP1-210ENST00000638237 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
NECAP1-210ENST00000638237 UHRF1BP1LA0JNW5 1464 aa11.74□□□□□ -0.53
NECAP1-210ENST00000638237 E9PCH4 1651 aa11.72□□□□□ -0.53
NECAP1-210ENST00000638237 MAGI2Q86UL8 1455 aa11.72□□□□□ -0.53
NECAP1-210ENST00000638237 ZFYVE16Q7Z3T8 1539 aa11.71□□□□□ -0.53
NECAP1-210ENST00000638237 ERBINQ96RT1 1412 aa11.71□□□□□ -0.53
NECAP1-210ENST00000638237 SPAG9O60271 1321 aaKnown RBP11.71□□□□□ -0.54
NECAP1-210ENST00000638237 CFAP65Q6ZU64 1925 aaKnown RBP11.7□□□□□ -0.54
NECAP1-210ENST00000638237 SMG6Q86US8 1419 aaKnown RBP11.7□□□□□ -0.54
NECAP1-210ENST00000638237 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
NECAP1-210ENST00000638237 FANCAO15360 1455 aa11.68□□□□□ -0.54
NECAP1-210ENST00000638237 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
NECAP1-210ENST00000638237 RNF123Q5XPI4 1314 aa11.67□□□□□ -0.54
NECAP1-210ENST00000638237 SPHKAPQ2M3C7 1700 aa11.67□□□□□ -0.54
NECAP1-210ENST00000638237 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
NECAP1-210ENST00000638237 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-210ENST00000638237 NOP58Q9Y2X3 529 aaKnown RBP11.66□□□□□ -0.54
NECAP1-210ENST00000638237 PRDM15P57071 1507 aaPredicted RBP11.66□□□□□ -0.54
NECAP1-210ENST00000638237 SCAPERQ9BY12 1400 aa11.66□□□□□ -0.54
NECAP1-210ENST00000638237 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
NECAP1-210ENST00000638237 ATP10AO60312 1499 aa11.65□□□□□ -0.54
NECAP1-210ENST00000638237 TMC1Q8TDI8 760 aa11.65□□□□□ -0.54
NECAP1-210ENST00000638237 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
NECAP1-210ENST00000638237 CLTCL1P53675 1640 aa11.65□□□□□ -0.54
NECAP1-210ENST00000638237 INO80Q9ULG1 1556 aaPredicted RBP11.65□□□□□ -0.55
NECAP1-210ENST00000638237 ADGRL1O94910 1474 aa11.65□□□□□ -0.55
NECAP1-210ENST00000638237 CEP152O94986 1710 aa11.64□□□□□ -0.55
NECAP1-210ENST00000638237 ASXL2Q76L83 1435 aa11.64□□□□□ -0.55
NECAP1-210ENST00000638237 TESK2Q96S53 571 aa11.64□□□□□ -0.55
NECAP1-210ENST00000638237 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
NECAP1-210ENST00000638237 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
NECAP1-210ENST00000638237 KIF3BO15066 747 aa11.63□□□□□ -0.55
NECAP1-210ENST00000638237 DEKP35659 375 aaKnown RBP11.63□□□□□ -0.55
NECAP1-210ENST00000638237 UGGT1Q9NYU2 1555 aa11.63□□□□□ -0.55
NECAP1-210ENST00000638237 COL17A1Q9UMD9 1497 aaPredicted RBP11.63□□□□□ -0.55
NECAP1-210ENST00000638237 RNF17Q9BXT8 1623 aaKnown RBP11.63□□□□□ -0.55
NECAP1-210ENST00000638237 EIF2AK4Q9P2K8 1649 aaKnown RBP11.63□□□□□ -0.55
NECAP1-210ENST00000638237 CACNB1Q02641 598 aaPredicted RBP11.63□□□□□ -0.55
NECAP1-210ENST00000638237 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
NECAP1-210ENST00000638237 ARAP3Q8WWN8 1544 aa11.63□□□□□ -0.55
NECAP1-210ENST00000638237 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
NECAP1-210ENST00000638237 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
NECAP1-210ENST00000638237 LAMC1P11047 1609 aa11.62□□□□□ -0.55
NECAP1-210ENST00000638237 CC2D1BQ5T0F9 858 aaKnown RBP11.61□□□□□ -0.55
NECAP1-210ENST00000638237 TET3O43151 1660 aa11.61□□□□□ -0.55
NECAP1-210ENST00000638237 RTEL1-TNFRSF6BF6WH68 1400 aa11.61□□□□□ -0.55
NECAP1-210ENST00000638237 KIDINS220Q9ULH0 1771 aa11.61□□□□□ -0.55
NECAP1-210ENST00000638237 TRPM2O94759 1503 aa11.61□□□□□ -0.55
NECAP1-210ENST00000638237 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
NECAP1-210ENST00000638237 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-210ENST00000638237 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
NECAP1-210ENST00000638237 MROH1Q8NDA8 1641 aa11.6□□□□□ -0.55
NECAP1-210ENST00000638237 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-210ENST00000638237 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
NECAP1-210ENST00000638237 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-210ENST00000638237 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
NECAP1-210ENST00000638237 ANP32AP39687 249 aaKnown RBP11.58□□□□□ -0.56
NECAP1-210ENST00000638237 IPO9Q96P70 1041 aaKnown RBP11.58□□□□□ -0.56
NECAP1-210ENST00000638237 PANK3Q9H999 370 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms