RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 KDM5DQ9BY66 1539 aa26.25■■□□□ 1.79
CTSD-214ENST00000637937 DAPK1P53355 1430 aa26.25■■□□□ 1.79
CTSD-214ENST00000637937 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
CTSD-214ENST00000637937 KIF15Q9NS87 1388 aa26.24■■□□□ 1.79
CTSD-214ENST00000637937 SHANK2Q9UPX8 1470 aa26.23■■□□□ 1.79
CTSD-214ENST00000637937 FBXO31Q5XUX0 539 aaPredicted RBP26.23■■□□□ 1.79
CTSD-214ENST00000637937 DUOX2Q9NRD8 1548 aa26.22■■□□□ 1.79
CTSD-214ENST00000637937 FAM135AQ9P2D6 1515 aa26.2■■□□□ 1.79
CTSD-214ENST00000637937 DNMT1P26358 1616 aaKnown RBP26.19■■□□□ 1.78
CTSD-214ENST00000637937 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
CTSD-214ENST00000637937 STRCQ7RTU9 1775 aa26.17■■□□□ 1.78
CTSD-214ENST00000637937 TNRQ92752 1358 aa26.17■■□□□ 1.78
CTSD-214ENST00000637937 ANKRD30AQ9BXX3 1397 aa26.17■■□□□ 1.78
CTSD-214ENST00000637937 PZPP20742 1482 aa26.17■■□□□ 1.78
CTSD-214ENST00000637937 CROCC2H7BZ55 1655 aa26.16■■□□□ 1.78
CTSD-214ENST00000637937 EIF2AK4Q9P2K8 1649 aaKnown RBP26.16■■□□□ 1.78
CTSD-214ENST00000637937 NCOA1Q15788 1441 aa26.15■■□□□ 1.78
CTSD-214ENST00000637937 MYO3AQ8NEV4 1616 aa26.15■■□□□ 1.78
CTSD-214ENST00000637937 RNF17Q9BXT8 1623 aaKnown RBP26.15■■□□□ 1.78
CTSD-214ENST00000637937 CAMSAP1Q5T5Y3 1602 aa26.14■■□□□ 1.78
CTSD-214ENST00000637937 FBXO41Q8TF61 875 aa26.14■■□□□ 1.78
CTSD-214ENST00000637937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.14■■□□□ 1.78
CTSD-214ENST00000637937 ERBINQ96RT1 1412 aa26.14■■□□□ 1.77
CTSD-214ENST00000637937 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
CTSD-214ENST00000637937 CEP170BQ9Y4F5 1589 aaPredicted RBP26.13■■□□□ 1.77
CTSD-214ENST00000637937 ABCC3O15438 1527 aa26.12■■□□□ 1.77
CTSD-214ENST00000637937 PTPRTO14522 1441 aa26.12■■□□□ 1.77
CTSD-214ENST00000637937 CERKQ8TCT0 537 aa26.11■■□□□ 1.77
CTSD-214ENST00000637937 A2ML1A8K2U0 1454 aa26.1■■□□□ 1.77
CTSD-214ENST00000637937 PKD2Q13563 968 aa26.08■■□□□ 1.77
CTSD-214ENST00000637937 ZNF142P52746 1687 aaPredicted RBP26.08■■□□□ 1.77
CTSD-214ENST00000637937 MROH1Q8NDA8 1641 aa26.07■■□□□ 1.76
CTSD-214ENST00000637937 KANK1Q14678 1352 aa26.06■■□□□ 1.76
CTSD-214ENST00000637937 ZC3H13Q5T200 1668 aaKnown RBP26.06■■□□□ 1.76
CTSD-214ENST00000637937 PLA2R1Q13018 1463 aa26.05■■□□□ 1.76
CTSD-214ENST00000637937 ADGRL2O95490 1459 aa26.03■■□□□ 1.76
CTSD-214ENST00000637937 THEMISQ8N1K5 641 aaPredicted RBP26.02■■□□□ 1.76
CTSD-214ENST00000637937 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
CTSD-214ENST00000637937 PRDM15P57071 1507 aaPredicted RBP26.01■■□□□ 1.75
CTSD-214ENST00000637937 ITGAEP38570 1179 aa26■■□□□ 1.75
CTSD-214ENST00000637937 ERVK-7P63135 1459 aa25.99■■□□□ 1.75
CTSD-214ENST00000637937 CEP152O94986 1710 aa25.99■■□□□ 1.75
CTSD-214ENST00000637937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.97■■□□□ 1.753e-7■■■□□ 14.6
CTSD-214ENST00000637937 ANKRD50Q9ULJ7 1429 aa25.97■■□□□ 1.75
CTSD-214ENST00000637937 SPATA31D1Q6ZQQ2 1576 aa25.96■■□□□ 1.75
CTSD-214ENST00000637937 ANKLE2Q86XL3 938 aa25.96■■□□□ 1.75
CTSD-214ENST00000637937 UGGT1Q9NYU2 1555 aa25.95■■□□□ 1.75
CTSD-214ENST00000637937 ARHGAP31Q2M1Z3 1444 aa25.95■■□□□ 1.74
CTSD-214ENST00000637937 DEPDC5O75140 1603 aa25.95■■□□□ 1.74
CTSD-214ENST00000637937 ZNF335Q9H4Z2 1342 aaPredicted RBP25.9■■□□□ 1.74
CTSD-214ENST00000637937 ROCK1Q13464 1354 aa25.89■■□□□ 1.74
CTSD-214ENST00000637937 CFAP65Q6ZU64 1925 aaKnown RBP25.88■■□□□ 1.73
CTSD-214ENST00000637937 LMTK2Q8IWU2 1503 aa25.88■■□□□ 1.73
CTSD-214ENST00000637937 LTBP4Q8N2S1 1624 aa25.87■■□□□ 1.73
CTSD-214ENST00000637937 VWDEQ8N2E2 1590 aa25.86■■□□□ 1.73
CTSD-214ENST00000637937 STAG3Q9UJ98 1225 aa25.85■■□□□ 1.73
CTSD-214ENST00000637937 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
CTSD-214ENST00000637937 NPHP4O75161 1426 aaPredicted RBP25.8■■□□□ 1.72
CTSD-214ENST00000637937 POLR1AO95602 1720 aaPredicted RBP25.8■■□□□ 1.72
CTSD-214ENST00000637937 IDI1Q13907 227 aa25.8■■□□□ 1.72
CTSD-214ENST00000637937 EFCAB6Q5THR3 1501 aa25.79■■□□□ 1.72
CTSD-214ENST00000637937 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
CTSD-214ENST00000637937 TXNDC2Q86VQ3 553 aa25.77■■□□□ 1.72
CTSD-214ENST00000637937 MED14O60244 1454 aa25.77■■□□□ 1.72
CTSD-214ENST00000637937 EID1Q9Y6B2 187 aa25.76■■□□□ 1.71
CTSD-214ENST00000637937 UBR1Q8IWV7 1749 aa25.76■■□□□ 1.71
CTSD-214ENST00000637937 NOS1P29475 1434 aa25.75■■□□□ 1.71
CTSD-214ENST00000637937 SLC52A1Q9NWF4 448 aa25.75■■□□□ 1.71
CTSD-214ENST00000637937 IQSEC2Q5JU85 1478 aa25.74■■□□□ 1.71
CTSD-214ENST00000637937 NUP155O75694 1391 aa25.74■■□□□ 1.71
CTSD-214ENST00000637937 LTKP29376 864 aa25.74■■□□□ 1.71
CTSD-214ENST00000637937 RPRD2Q5VT52 1461 aaKnown RBP25.72■■□□□ 1.71
CTSD-214ENST00000637937 PIK3C2BO00750 1634 aa25.72■■□□□ 1.71
CTSD-214ENST00000637937 UNC13BO14795 1591 aa25.72■■□□□ 1.71
CTSD-214ENST00000637937 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
CTSD-214ENST00000637937 SYNMO15061 1565 aa25.71■■□□□ 1.71
CTSD-214ENST00000637937 TMEM2Q9UHN6 1383 aa25.7■■□□□ 1.71
CTSD-214ENST00000637937 ARHGAP23Q9P227 1491 aa25.7■■□□□ 1.7
CTSD-214ENST00000637937 SLIT1O75093 1534 aa25.69■■□□□ 1.7
CTSD-214ENST00000637937 TET3O43151 1660 aa25.69■■□□□ 1.7
CTSD-214ENST00000637937 UBAP1LF5GYI3 381 aa25.69■■□□□ 1.7
CTSD-214ENST00000637937 IQGAP1P46940 1657 aa25.68■■□□□ 1.7
CTSD-214ENST00000637937 CPS1P31327 1500 aa25.65■■□□□ 1.7
CTSD-214ENST00000637937 CHGAP10645 457 aaKnown RBP25.63■■□□□ 1.69
CTSD-214ENST00000637937 IQGAP3Q86VI3 1631 aa25.63■■□□□ 1.69
CTSD-214ENST00000637937 GCC2Q8IWJ2 1684 aa25.62■■□□□ 1.69
CTSD-214ENST00000637937 ADGRB3O60242 1522 aa25.62■■□□□ 1.69
CTSD-214ENST00000637937 BCANQ96GW7 911 aa25.6■■□□□ 1.69
CTSD-214ENST00000637937 KDM5AP29375 1690 aaKnown RBP25.6■■□□□ 1.69
CTSD-214ENST00000637937 NAIPQ13075 1403 aa25.6■■□□□ 1.69
CTSD-214ENST00000637937 E9PCH4 1651 aa25.58■■□□□ 1.68
CTSD-214ENST00000637937 HDGFP51858 240 aaKnown RBP25.57■■□□□ 1.68
CTSD-214ENST00000637937 PPP1R15AO75807 674 aaPredicted RBP25.56■■□□□ 1.68
CTSD-214ENST00000637937 SLC26A8Q96RN1 970 aa25.56■■□□□ 1.68
CTSD-214ENST00000637937 SENP3Q9H4L4 574 aaPredicted RBP25.56■■□□□ 1.68
CTSD-214ENST00000637937 TOM1O60784 492 aa25.55■■□□□ 1.68
CTSD-214ENST00000637937 TRIM52Q96A61 297 aa25.55■■□□□ 1.68
CTSD-214ENST00000637937 SCAF1Q9H7N4 1312 aaKnown RBP25.55■■□□□ 1.68
CTSD-214ENST00000637937 PIP4K2BP78356 416 aa25.53■■□□□ 1.68
CTSD-214ENST00000637937 HFM1A2PYH4 1435 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms