RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
CHD2-213ENST00000628118 DUOX2Q9NRD8 1548 aa12.24□□□□□ -0.45
CHD2-213ENST00000628118 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
CHD2-213ENST00000628118 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
CHD2-213ENST00000628118 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
CHD2-213ENST00000628118 NCOA1Q15788 1441 aa12.22□□□□□ -0.45
CHD2-213ENST00000628118 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
CHD2-213ENST00000628118 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
CHD2-213ENST00000628118 KIF15Q9NS87 1388 aa12.22□□□□□ -0.45
CHD2-213ENST00000628118 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
CHD2-213ENST00000628118 ESF1Q9H501 851 aaKnown RBP12.21□□□□□ -0.45
CHD2-213ENST00000628118 MLECQ14165 292 aa12.2□□□□□ -0.46
CHD2-213ENST00000628118 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
CHD2-213ENST00000628118 KIF3BO15066 747 aa12.19□□□□□ -0.46
CHD2-213ENST00000628118 RRP7BPQ9NSQ0 103 aa12.19□□□□□ -0.46
CHD2-213ENST00000628118 CHIC2Q9UKJ5 165 aa12.19□□□□□ -0.46
CHD2-213ENST00000628118 FER1L4A9Z1Z3 1794 aa12.19□□□□□ -0.46
CHD2-213ENST00000628118 PTPRMP28827 1452 aa12.18□□□□□ -0.46
CHD2-213ENST00000628118 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
CHD2-213ENST00000628118 GGT6Q6P531 493 aa12.17□□□□□ -0.46
CHD2-213ENST00000628118 RNF17Q9BXT8 1623 aaKnown RBP12.17□□□□□ -0.46
CHD2-213ENST00000628118 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
CHD2-213ENST00000628118 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
CHD2-213ENST00000628118 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
CHD2-213ENST00000628118 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
CHD2-213ENST00000628118 ITGAEP38570 1179 aa12.14□□□□□ -0.47
CHD2-213ENST00000628118 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
CHD2-213ENST00000628118 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
CHD2-213ENST00000628118 KANK1Q14678 1352 aa12.13□□□□□ -0.47
CHD2-213ENST00000628118 ZC3H13Q5T200 1668 aaKnown RBP12.13□□□□□ -0.47
CHD2-213ENST00000628118 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
CHD2-213ENST00000628118 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
CHD2-213ENST00000628118 PRDM15P57071 1507 aaPredicted RBP12.12□□□□□ -0.47
CHD2-213ENST00000628118 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
CHD2-213ENST00000628118 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
CHD2-213ENST00000628118 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
CHD2-213ENST00000628118 NPATQ14207 1427 aa12.11□□□□□ -0.47
CHD2-213ENST00000628118 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
CHD2-213ENST00000628118 MROH1Q8NDA8 1641 aa12.1□□□□□ -0.47
CHD2-213ENST00000628118 ABCC3O15438 1527 aa12.09□□□□□ -0.47
CHD2-213ENST00000628118 C3P01024 1663 aa12.09□□□□□ -0.47
CHD2-213ENST00000628118 LMTK2Q8IWU2 1503 aa12.08□□□□□ -0.48
CHD2-213ENST00000628118 GCC2Q8IWJ2 1684 aa12.08□□□□□ -0.48
CHD2-213ENST00000628118 NAIPQ13075 1403 aa12.08□□□□□ -0.48
CHD2-213ENST00000628118 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
CHD2-213ENST00000628118 PZPP20742 1482 aa12.08□□□□□ -0.48
CHD2-213ENST00000628118 UNC13BO14795 1591 aa12.07□□□□□ -0.48
CHD2-213ENST00000628118 ARHGAP31Q2M1Z3 1444 aa12.07□□□□□ -0.48
CHD2-213ENST00000628118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.06□□□□□ -0.484e-7■■□□□ 12.5
CHD2-213ENST00000628118 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
CHD2-213ENST00000628118 CEP152O94986 1710 aa12.04□□□□□ -0.48
CHD2-213ENST00000628118 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
CHD2-213ENST00000628118 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
CHD2-213ENST00000628118 RPRD2Q5VT52 1461 aaKnown RBP12.03□□□□□ -0.48
CHD2-213ENST00000628118 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
CHD2-213ENST00000628118 NUP155O75694 1391 aa12.03□□□□□ -0.48
CHD2-213ENST00000628118 IQGAP3Q86VI3 1631 aa12.02□□□□□ -0.49
CHD2-213ENST00000628118 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
CHD2-213ENST00000628118 TET3O43151 1660 aa12.02□□□□□ -0.49
CHD2-213ENST00000628118 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
CHD2-213ENST00000628118 HRCP23327 699 aa12.01□□□□□ -0.49
CHD2-213ENST00000628118 TNRQ92752 1358 aa12.01□□□□□ -0.49
CHD2-213ENST00000628118 SETD5Q9C0A6 1442 aa12.01□□□□□ -0.49
CHD2-213ENST00000628118 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
CHD2-213ENST00000628118 ERVK-7P63135 1459 aa12□□□□□ -0.49
CHD2-213ENST00000628118 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
CHD2-213ENST00000628118 NLRP1Q9C000 1473 aa12□□□□□ -0.49
CHD2-213ENST00000628118 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
CHD2-213ENST00000628118 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
CHD2-213ENST00000628118 NOS1P29475 1434 aa11.97□□□□□ -0.49
CHD2-213ENST00000628118 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
CHD2-213ENST00000628118 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
CHD2-213ENST00000628118 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.49
CHD2-213ENST00000628118 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
CHD2-213ENST00000628118 SLC52A1Q9NWF4 448 aa11.96□□□□□ -0.49
CHD2-213ENST00000628118 CFAP65Q6ZU64 1925 aaKnown RBP11.96□□□□□ -0.5
CHD2-213ENST00000628118 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
CHD2-213ENST00000628118 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
CHD2-213ENST00000628118 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
CHD2-213ENST00000628118 E9PCH4 1651 aa11.94□□□□□ -0.5
CHD2-213ENST00000628118 THEMISQ8N1K5 641 aaPredicted RBP11.93□□□□□ -0.5
CHD2-213ENST00000628118 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
CHD2-213ENST00000628118 KDM5AP29375 1690 aaKnown RBP11.92□□□□□ -0.5
CHD2-213ENST00000628118 PTPRTO14522 1441 aa11.92□□□□□ -0.5
CHD2-213ENST00000628118 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
CHD2-213ENST00000628118 SYNMO15061 1565 aa11.9□□□□□ -0.5
CHD2-213ENST00000628118 PKD2Q13563 968 aa11.9□□□□□ -0.5
CHD2-213ENST00000628118 MPHOSPH9Q99550 1183 aa11.9□□□□□ -0.5
CHD2-213ENST00000628118 HSPA2P54652 639 aa11.89□□□□□ -0.51
CHD2-213ENST00000628118 IDI1Q13907 227 aa11.89□□□□□ -0.51
CHD2-213ENST00000628118 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
CHD2-213ENST00000628118 SPHKAPQ2M3C7 1700 aa11.89□□□□□ -0.51
CHD2-213ENST00000628118 PIK3C2BO00750 1634 aa11.88□□□□□ -0.51
CHD2-213ENST00000628118 TRPM2O94759 1503 aa11.87□□□□□ -0.51
CHD2-213ENST00000628118 UBR1Q8IWV7 1749 aa11.87□□□□□ -0.51
CHD2-213ENST00000628118 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
CHD2-213ENST00000628118 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
CHD2-213ENST00000628118 ANKLE2Q86XL3 938 aa11.86□□□□□ -0.51
CHD2-213ENST00000628118 SLIT1O75093 1534 aa11.86□□□□□ -0.51
CHD2-213ENST00000628118 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms