RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 UNC13BO14795 1591 aa16.08■□□□□ 0.16
KCNMA1-225ENST00000626620 KIF15Q9NS87 1388 aa16.08■□□□□ 0.16
KCNMA1-225ENST00000626620 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
KCNMA1-225ENST00000626620 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
KCNMA1-225ENST00000626620 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
KCNMA1-225ENST00000626620 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
KCNMA1-225ENST00000626620 ITGAEP38570 1179 aa16.04■□□□□ 0.16
KCNMA1-225ENST00000626620 PRDM15P57071 1507 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-225ENST00000626620 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
KCNMA1-225ENST00000626620 ZNF142P52746 1687 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-225ENST00000626620 ANKRD50Q9ULJ7 1429 aa16.03■□□□□ 0.16
KCNMA1-225ENST00000626620 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-225ENST00000626620 KDM5DQ9BY66 1539 aa16.02■□□□□ 0.16
KCNMA1-225ENST00000626620 SETD5Q9C0A6 1442 aa16.01■□□□□ 0.15
KCNMA1-225ENST00000626620 SETD1BQ9UPS6 1966 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-225ENST00000626620 IQGAP3Q86VI3 1631 aa16■□□□□ 0.15
KCNMA1-225ENST00000626620 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
KCNMA1-225ENST00000626620 HRCP23327 699 aa15.96■□□□□ 0.15
KCNMA1-225ENST00000626620 LMTK2Q8IWU2 1503 aa15.96■□□□□ 0.15
KCNMA1-225ENST00000626620 ZC3H13Q5T200 1668 aaKnown RBP15.96■□□□□ 0.15
KCNMA1-225ENST00000626620 FAM135AQ9P2D6 1515 aa15.96■□□□□ 0.15
KCNMA1-225ENST00000626620 CLTCQ00610 1675 aaKnown RBP15.96■□□□□ 0.15
KCNMA1-225ENST00000626620 CEP152O94986 1710 aa15.96■□□□□ 0.15
KCNMA1-225ENST00000626620 PZPP20742 1482 aa15.95■□□□□ 0.14
KCNMA1-225ENST00000626620 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
KCNMA1-225ENST00000626620 NPATQ14207 1427 aa15.93■□□□□ 0.14
KCNMA1-225ENST00000626620 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
KCNMA1-225ENST00000626620 PCGF6Q9BYE7 350 aa15.93■□□□□ 0.14
KCNMA1-225ENST00000626620 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
KCNMA1-225ENST00000626620 ABCC3O15438 1527 aa15.93■□□□□ 0.14
KCNMA1-225ENST00000626620 TET3O43151 1660 aa15.91■□□□□ 0.14
KCNMA1-225ENST00000626620 CAMSAP1Q5T5Y3 1602 aa15.91■□□□□ 0.14
KCNMA1-225ENST00000626620 E9PCH4 1651 aa15.9■□□□□ 0.14
KCNMA1-225ENST00000626620 KIF3BO15066 747 aa15.88■□□□□ 0.13
KCNMA1-225ENST00000626620 EFCAB6Q5THR3 1501 aa15.88■□□□□ 0.13
KCNMA1-225ENST00000626620 LTBP4Q8N2S1 1624 aa15.88■□□□□ 0.13
KCNMA1-225ENST00000626620 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
KCNMA1-225ENST00000626620 PTPRTO14522 1441 aa15.86■□□□□ 0.13
KCNMA1-225ENST00000626620 FBXO41Q8TF61 875 aa15.85■□□□□ 0.13
KCNMA1-225ENST00000626620 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
KCNMA1-225ENST00000626620 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
KCNMA1-225ENST00000626620 ARHGAP31Q2M1Z3 1444 aa15.84■□□□□ 0.13
KCNMA1-225ENST00000626620 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.13
KCNMA1-225ENST00000626620 HSPA2P54652 639 aa15.83■□□□□ 0.12
KCNMA1-225ENST00000626620 CEP170BQ9Y4F5 1589 aaPredicted RBP15.82■□□□□ 0.12
KCNMA1-225ENST00000626620 NUP155O75694 1391 aa15.82■□□□□ 0.12
KCNMA1-225ENST00000626620 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
KCNMA1-225ENST00000626620 MLECQ14165 292 aa15.81■□□□□ 0.12
KCNMA1-225ENST00000626620 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
KCNMA1-225ENST00000626620 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
KCNMA1-225ENST00000626620 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
KCNMA1-225ENST00000626620 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
KCNMA1-225ENST00000626620 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
KCNMA1-225ENST00000626620 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
KCNMA1-225ENST00000626620 SPATA31D1Q6ZQQ2 1576 aa15.8■□□□□ 0.12
KCNMA1-225ENST00000626620 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
KCNMA1-225ENST00000626620 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
KCNMA1-225ENST00000626620 GGT6Q6P531 493 aa15.79■□□□□ 0.12
KCNMA1-225ENST00000626620 SYNMO15061 1565 aa15.79■□□□□ 0.12
KCNMA1-225ENST00000626620 NEURL4Q96JN8 1562 aa15.78■□□□□ 0.12
KCNMA1-225ENST00000626620 NOS1P29475 1434 aa15.77■□□□□ 0.12
KCNMA1-225ENST00000626620 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.11
KCNMA1-225ENST00000626620 KANK1Q14678 1352 aa15.75■□□□□ 0.11
KCNMA1-225ENST00000626620 TRPM2O94759 1503 aa15.75■□□□□ 0.11
KCNMA1-225ENST00000626620 ERVK-7P63135 1459 aa15.74■□□□□ 0.11
KCNMA1-225ENST00000626620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
KCNMA1-225ENST00000626620 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
KCNMA1-225ENST00000626620 CFAP65Q6ZU64 1925 aaKnown RBP15.74■□□□□ 0.11
KCNMA1-225ENST00000626620 A2ML1A8K2U0 1454 aa15.73■□□□□ 0.11
KCNMA1-225ENST00000626620 CLTCL1P53675 1640 aa15.72■□□□□ 0.11
KCNMA1-225ENST00000626620 ANKRD30BQ9BXX2 1392 aa15.72■□□□□ 0.11
KCNMA1-225ENST00000626620 CERKQ8TCT0 537 aa15.7■□□□□ 0.1
KCNMA1-225ENST00000626620 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
KCNMA1-225ENST00000626620 UGGT1Q9NYU2 1555 aa15.7■□□□□ 0.1
KCNMA1-225ENST00000626620 PKD2Q13563 968 aa15.7■□□□□ 0.1
KCNMA1-225ENST00000626620 KDM5AP29375 1690 aaKnown RBP15.69■□□□□ 0.1
KCNMA1-225ENST00000626620 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
KCNMA1-225ENST00000626620 FOXD1Q16676 465 aa15.68■□□□□ 0.1
KCNMA1-225ENST00000626620 MED14O60244 1454 aa15.68■□□□□ 0.1
KCNMA1-225ENST00000626620 UBR1Q8IWV7 1749 aa15.67■□□□□ 0.1
KCNMA1-225ENST00000626620 FBXO31Q5XUX0 539 aaPredicted RBP15.67■□□□□ 0.1
KCNMA1-225ENST00000626620 MYO5BQ9ULV0 1848 aa15.67■□□□□ 0.1
KCNMA1-225ENST00000626620 TMEM131LA2VDJ0 1609 aa15.67■□□□□ 0.1
KCNMA1-225ENST00000626620 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
KCNMA1-225ENST00000626620 STRCP1A6NGW2 1772 aa15.65■□□□□ 0.1
KCNMA1-225ENST00000626620 ALKQ9UM73 1620 aa15.64■□□□□ 0.09
KCNMA1-225ENST00000626620 NLRP1Q9C000 1473 aa15.64■□□□□ 0.09
KCNMA1-225ENST00000626620 IFT172Q9UG01 1749 aa15.64■□□□□ 0.09
KCNMA1-225ENST00000626620 ADGRB3O60242 1522 aa15.63■□□□□ 0.09
KCNMA1-225ENST00000626620 KIF1BO60333 1816 aa15.63■□□□□ 0.09
KCNMA1-225ENST00000626620 SPATA31E1Q6ZUB1 1445 aa15.62■□□□□ 0.09
KCNMA1-225ENST00000626620 IQGAP1P46940 1657 aa15.6■□□□□ 0.09
KCNMA1-225ENST00000626620 TNRQ92752 1358 aa15.6■□□□□ 0.09
KCNMA1-225ENST00000626620 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
KCNMA1-225ENST00000626620 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
KCNMA1-225ENST00000626620 SLIT1O75093 1534 aa15.58■□□□□ 0.08
KCNMA1-225ENST00000626620 ARHGAP23Q9P227 1491 aa15.58■□□□□ 0.08
KCNMA1-225ENST00000626620 PPLO60437 1756 aa15.58■□□□□ 0.08
KCNMA1-225ENST00000626620 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
KCNMA1-225ENST00000626620 IDI1Q13907 227 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms