RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 ERBINQ96RT1 1412 aa24.2■■□□□ 1.46
TRA2A-212ENST00000621813 CCDC7Q96M83 1385 aa24.19■■□□□ 1.46
TRA2A-212ENST00000621813 WDR7Q9Y4E6 1490 aa24.17■■□□□ 1.46
TRA2A-212ENST00000621813 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
TRA2A-212ENST00000621813 MSH5O43196 834 aa24.16■■□□□ 1.46
TRA2A-212ENST00000621813 RALGAPBQ86X10 1494 aa24.16■■□□□ 1.46
TRA2A-212ENST00000621813 EIF5BO60841 1220 aaKnown RBP24.14■■□□□ 1.46
TRA2A-212ENST00000621813 KDM5CP41229 1560 aa24.13■■□□□ 1.45
TRA2A-212ENST00000621813 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
TRA2A-212ENST00000621813 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
TRA2A-212ENST00000621813 USP47Q96K76 1375 aa24.09■■□□□ 1.45
TRA2A-212ENST00000621813 CCDC144AA2RUR9 1427 aa24.09■■□□□ 1.45
TRA2A-212ENST00000621813 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
TRA2A-212ENST00000621813 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
TRA2A-212ENST00000621813 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
TRA2A-212ENST00000621813 ATP10AO60312 1499 aa24.06■■□□□ 1.44
TRA2A-212ENST00000621813 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
TRA2A-212ENST00000621813 KIF7Q2M1P5 1343 aa24.06■■□□□ 1.44
TRA2A-212ENST00000621813 ZFYVE16Q7Z3T8 1539 aa24.06■■□□□ 1.44
TRA2A-212ENST00000621813 ZNF326Q5BKZ1 582 aaKnown RBP24.04■■□□□ 1.44
TRA2A-212ENST00000621813 FANCAO15360 1455 aa24.02■■□□□ 1.44
TRA2A-212ENST00000621813 BCORL1Q5H9F3 1711 aa24.02■■□□□ 1.44
TRA2A-212ENST00000621813 SPAG9O60271 1321 aaKnown RBP24.02■■□□□ 1.43
TRA2A-212ENST00000621813 PLA2R1Q13018 1463 aa24.01■■□□□ 1.43
TRA2A-212ENST00000621813 INO80Q9ULG1 1556 aaPredicted RBP24■■□□□ 1.43
TRA2A-212ENST00000621813 DEPDC5O75140 1603 aa23.99■■□□□ 1.43
TRA2A-212ENST00000621813 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
TRA2A-212ENST00000621813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.99■■□□□ 1.436e-8■■□□□ 13.6
TRA2A-212ENST00000621813 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
TRA2A-212ENST00000621813 DCAF11Q8TEB1 546 aa23.98■■□□□ 1.43
TRA2A-212ENST00000621813 DAXXQ9UER7 740 aaPredicted RBP23.98■■□□□ 1.43
TRA2A-212ENST00000621813 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
TRA2A-212ENST00000621813 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
TRA2A-212ENST00000621813 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
TRA2A-212ENST00000621813 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
TRA2A-212ENST00000621813 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
TRA2A-212ENST00000621813 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
TRA2A-212ENST00000621813 LAMC1P11047 1609 aa23.96■■□□□ 1.43
TRA2A-212ENST00000621813 EIF2AK4Q9P2K8 1649 aaKnown RBP23.96■■□□□ 1.43
TRA2A-212ENST00000621813 PRKRIP1Q9H875 184 aaPredicted RBP23.96■■□□□ 1.43
TRA2A-212ENST00000621813 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.43
TRA2A-212ENST00000621813 NEFLP07196 543 aa23.94■■□□□ 1.42
TRA2A-212ENST00000621813 ADGRL1O94910 1474 aa23.93■■□□□ 1.42
TRA2A-212ENST00000621813 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
TRA2A-212ENST00000621813 E9PCH4 1651 aa23.92■■□□□ 1.42
TRA2A-212ENST00000621813 A2MP01023 1474 aa23.91■■□□□ 1.42
TRA2A-212ENST00000621813 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
TRA2A-212ENST00000621813 CFAP74Q9C0B2 1584 aa23.91■■□□□ 1.42
TRA2A-212ENST00000621813 FKBP8Q14318 412 aa23.9■■□□□ 1.42
TRA2A-212ENST00000621813 TET3O43151 1660 aa23.9■■□□□ 1.42
TRA2A-212ENST00000621813 NPM1P06748 294 aaKnown RBP eCLIP23.88■■□□□ 1.41
TRA2A-212ENST00000621813 SPHKAPQ2M3C7 1700 aa23.88■■□□□ 1.41
TRA2A-212ENST00000621813 SCAPERQ9BY12 1400 aa23.88■■□□□ 1.41
TRA2A-212ENST00000621813 GPRASP1Q5JY77 1395 aa23.87■■□□□ 1.41
TRA2A-212ENST00000621813 TRPM2O94759 1503 aa23.87■■□□□ 1.41
TRA2A-212ENST00000621813 VWDEQ8N2E2 1590 aa23.87■■□□□ 1.41
TRA2A-212ENST00000621813 CEP152O94986 1710 aa23.86■■□□□ 1.41
TRA2A-212ENST00000621813 KANK1Q14678 1352 aa23.85■■□□□ 1.41
TRA2A-212ENST00000621813 DHX29Q7Z478 1369 aaKnown RBP23.85■■□□□ 1.41
TRA2A-212ENST00000621813 BCANQ96GW7 911 aa23.84■■□□□ 1.41
TRA2A-212ENST00000621813 PRDM15P57071 1507 aaPredicted RBP23.83■■□□□ 1.41
TRA2A-212ENST00000621813 ZNF518AQ6AHZ1 1483 aa23.82■■□□□ 1.4
TRA2A-212ENST00000621813 ST20-MTHFSA0A0A6YYL1 179 aa23.82■■□□□ 1.4
TRA2A-212ENST00000621813 RGL3Q3MIN7 710 aa23.82■■□□□ 1.4
TRA2A-212ENST00000621813 PTPRTO14522 1441 aa23.82■■□□□ 1.4
TRA2A-212ENST00000621813 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
TRA2A-212ENST00000621813 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
TRA2A-212ENST00000621813 HNRNPUQ00839 825 aaKnown RBP eCLIP23.8■■□□□ 1.48e-8■□□□□ 9
TRA2A-212ENST00000621813 RNF17Q9BXT8 1623 aaKnown RBP23.8■■□□□ 1.4
TRA2A-212ENST00000621813 PKNOX2Q96KN3 472 aa23.8■■□□□ 1.4
TRA2A-212ENST00000621813 STAC3Q96MF2 364 aa23.8■■□□□ 1.4
TRA2A-212ENST00000621813 NEURL4Q96JN8 1562 aa23.79■■□□□ 1.4
TRA2A-212ENST00000621813 MRS2Q9HD23 443 aa23.78■■□□□ 1.4
TRA2A-212ENST00000621813 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.39
TRA2A-212ENST00000621813 CCDC136Q96JN2 1154 aa23.76■■□□□ 1.39
TRA2A-212ENST00000621813 KTN1Q86UP2 1357 aaKnown RBP23.76■■□□□ 1.39
TRA2A-212ENST00000621813 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
TRA2A-212ENST00000621813 CLTCL1P53675 1640 aa23.75■■□□□ 1.39
TRA2A-212ENST00000621813 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
TRA2A-212ENST00000621813 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
TRA2A-212ENST00000621813 CCDC184Q52MB2 194 aa23.73■■□□□ 1.39
TRA2A-212ENST00000621813 KIF3BO15066 747 aa23.72■■□□□ 1.39
TRA2A-212ENST00000621813 POGZQ7Z3K3 1410 aa23.7■■□□□ 1.39
TRA2A-212ENST00000621813 EFCAB6Q5THR3 1501 aa23.7■■□□□ 1.38
TRA2A-212ENST00000621813 LMTK2Q8IWU2 1503 aa23.7■■□□□ 1.38
TRA2A-212ENST00000621813 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
TRA2A-212ENST00000621813 MLH3Q9UHC1 1453 aa23.7■■□□□ 1.38
TRA2A-212ENST00000621813 COL17A1Q9UMD9 1497 aaPredicted RBP23.7■■□□□ 1.38
TRA2A-212ENST00000621813 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
TRA2A-212ENST00000621813 KIAA1210Q9ULL0 1709 aa23.67■■□□□ 1.38
TRA2A-212ENST00000621813 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
TRA2A-212ENST00000621813 NEO1Q92859 1461 aa23.67■■□□□ 1.38
TRA2A-212ENST00000621813 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
TRA2A-212ENST00000621813 KIF1BO60333 1816 aa23.66■■□□□ 1.38
TRA2A-212ENST00000621813 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
TRA2A-212ENST00000621813 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
TRA2A-212ENST00000621813 PPRC1Q5VV67 1664 aaKnown RBP23.63■■□□□ 1.37
TRA2A-212ENST00000621813 RALBP1Q15311 655 aa23.63■■□□□ 1.37
TRA2A-212ENST00000621813 TESK2Q96S53 571 aa23.61■■□□□ 1.37
TRA2A-212ENST00000621813 TMF1P82094 1093 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms