RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PPP6R1Q9UPN7 881 aa27.89■■■□□ 2.06
LITAF-220ENST00000620789 ITGAEP38570 1179 aa27.87■■■□□ 2.05
LITAF-220ENST00000620789 MROH2AA6NES4 1674 aa27.87■■■□□ 2.05
LITAF-220ENST00000620789 CLTCQ00610 1675 aaKnown RBP27.87■■■□□ 2.05
LITAF-220ENST00000620789 ROCK1Q13464 1354 aa27.86■■■□□ 2.05
LITAF-220ENST00000620789 FAM135AQ9P2D6 1515 aa27.85■■■□□ 2.05
LITAF-220ENST00000620789 C3P01024 1663 aa27.84■■■□□ 2.05
LITAF-220ENST00000620789 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
LITAF-220ENST00000620789 KDM5DQ9BY66 1539 aa27.82■■■□□ 2.04
LITAF-220ENST00000620789 MROH1Q8NDA8 1641 aa27.81■■■□□ 2.04
LITAF-220ENST00000620789 CEBPAP49715 358 aaPredicted RBP27.81■■■□□ 2.04
LITAF-220ENST00000620789 ANKRD50Q9ULJ7 1429 aa27.79■■■□□ 2.04
LITAF-220ENST00000620789 ZMYM3Q14202 1370 aa27.79■■■□□ 2.04
LITAF-220ENST00000620789 DEPDC5O75140 1603 aa27.78■■■□□ 2.04
LITAF-220ENST00000620789 PRDM15P57071 1507 aaPredicted RBP27.77■■■□□ 2.04
LITAF-220ENST00000620789 WASHC2CQ9Y4E1 1318 aa27.77■■■□□ 2.04
LITAF-220ENST00000620789 ZC3H13Q5T200 1668 aaKnown RBP27.76■■■□□ 2.03
LITAF-220ENST00000620789 ABCC3O15438 1527 aa27.74■■■□□ 2.03
LITAF-220ENST00000620789 CEP152O94986 1710 aa27.7■■■□□ 2.02
LITAF-220ENST00000620789 NPATQ14207 1427 aa27.69■■■□□ 2.02
LITAF-220ENST00000620789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.68■■■□□ 2.02
LITAF-220ENST00000620789 KANK1Q14678 1352 aa27.68■■■□□ 2.02
LITAF-220ENST00000620789 PREX1Q8TCU6 1659 aa27.68■■■□□ 2.02
LITAF-220ENST00000620789 VWDEQ8N2E2 1590 aa27.66■■■□□ 2.02
LITAF-220ENST00000620789 PZPP20742 1482 aa27.66■■■□□ 2.02
LITAF-220ENST00000620789 LMTK3Q96Q04 1460 aa27.66■■■□□ 2.02
LITAF-220ENST00000620789 CAMSAP1Q5T5Y3 1602 aa27.65■■■□□ 2.02
LITAF-220ENST00000620789 SETD1BQ9UPS6 1966 aaKnown RBP27.65■■■□□ 2.02
LITAF-220ENST00000620789 UNC13BO14795 1591 aa27.65■■■□□ 2.02
LITAF-220ENST00000620789 GCC2Q8IWJ2 1684 aa27.64■■■□□ 2.02
LITAF-220ENST00000620789 NAIPQ13075 1403 aa27.63■■■□□ 2.01
LITAF-220ENST00000620789 LMTK2Q8IWU2 1503 aa27.62■■■□□ 2.01
LITAF-220ENST00000620789 HFM1A2PYH4 1435 aa27.61■■■□□ 2.01
LITAF-220ENST00000620789 UHRF1BP1Q6BDS2 1440 aa27.61■■■□□ 2.01
LITAF-220ENST00000620789 FBXO31Q5XUX0 539 aaPredicted RBP27.58■■■□□ 2.01
LITAF-220ENST00000620789 ARHGAP31Q2M1Z3 1444 aa27.58■■■□□ 2
LITAF-220ENST00000620789 MYO3AQ8NEV4 1616 aa27.56■■■□□ 2
LITAF-220ENST00000620789 EFCAB6Q5THR3 1501 aa27.54■■■□□ 2
LITAF-220ENST00000620789 SPATA31D1Q6ZQQ2 1576 aa27.53■■■□□ 2
LITAF-220ENST00000620789 TNRQ92752 1358 aa27.53■■■□□ 2
LITAF-220ENST00000620789 IQGAP3Q86VI3 1631 aa27.52■■■□□ 2
LITAF-220ENST00000620789 ERVK-7P63135 1459 aa27.52■■■□□ 2
LITAF-220ENST00000620789 TET3O43151 1660 aa27.51■■□□□ 1.99
LITAF-220ENST00000620789 ZNF142P52746 1687 aaPredicted RBP27.5■■□□□ 1.99
LITAF-220ENST00000620789 HSPA2P54652 639 aa27.5■■□□□ 1.99
LITAF-220ENST00000620789 NUP155O75694 1391 aa27.49■■□□□ 1.99
LITAF-220ENST00000620789 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
LITAF-220ENST00000620789 CFAP65Q6ZU64 1925 aaKnown RBP27.46■■□□□ 1.99
LITAF-220ENST00000620789 A2ML1A8K2U0 1454 aa27.44■■□□□ 1.98
LITAF-220ENST00000620789 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
LITAF-220ENST00000620789 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
LITAF-220ENST00000620789 E9PCH4 1651 aa27.4■■□□□ 1.98
LITAF-220ENST00000620789 NOS1P29475 1434 aa27.39■■□□□ 1.97
LITAF-220ENST00000620789 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
LITAF-220ENST00000620789 SYNMO15061 1565 aa27.37■■□□□ 1.97
LITAF-220ENST00000620789 TRIM52Q96A61 297 aa27.35■■□□□ 1.97
LITAF-220ENST00000620789 UGGT1Q9NYU2 1555 aa27.35■■□□□ 1.97
LITAF-220ENST00000620789 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
LITAF-220ENST00000620789 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
LITAF-220ENST00000620789 RAB3GAP2Q9H2M9 1393 aa27.29■■□□□ 1.96
LITAF-220ENST00000620789 PIK3C2BO00750 1634 aa27.29■■□□□ 1.96
LITAF-220ENST00000620789 UBR1Q8IWV7 1749 aa27.29■■□□□ 1.96
LITAF-220ENST00000620789 ACIN1Q9UKV3 1341 aaKnown RBP27.28■■□□□ 1.96
LITAF-220ENST00000620789 THEMISQ8N1K5 641 aaPredicted RBP27.28■■□□□ 1.96
LITAF-220ENST00000620789 SLC52A1Q9NWF4 448 aa27.27■■□□□ 1.96
LITAF-220ENST00000620789 IDI1Q13907 227 aa27.26■■□□□ 1.95
LITAF-220ENST00000620789 SLC4A1APQ9BWU0 796 aaKnown RBP27.25■■□□□ 1.95
LITAF-220ENST00000620789 SPHKAPQ2M3C7 1700 aa27.24■■□□□ 1.95
LITAF-220ENST00000620789 KDM5AP29375 1690 aaKnown RBP27.24■■□□□ 1.95
LITAF-220ENST00000620789 PTPRTO14522 1441 aa27.23■■□□□ 1.95
LITAF-220ENST00000620789 PKD2Q13563 968 aa27.22■■□□□ 1.95
LITAF-220ENST00000620789 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
LITAF-220ENST00000620789 DMRT2Q9Y5R5 561 aa27.21■■□□□ 1.95
LITAF-220ENST00000620789 NCKAP5LQ9HCH0 1330 aa27.2■■□□□ 1.95
LITAF-220ENST00000620789 POLR1AO95602 1720 aaPredicted RBP27.19■■□□□ 1.94
LITAF-220ENST00000620789 STAG3Q9UJ98 1225 aa27.19■■□□□ 1.94
LITAF-220ENST00000620789 TRPM2O94759 1503 aa27.17■■□□□ 1.94
LITAF-220ENST00000620789 HRCP23327 699 aa27.17■■□□□ 1.94
LITAF-220ENST00000620789 MPHOSPH9Q99550 1183 aa27.17■■□□□ 1.94
LITAF-220ENST00000620789 SLIT1O75093 1534 aa27.16■■□□□ 1.94
LITAF-220ENST00000620789 ANKLE2Q86XL3 938 aa27.16■■□□□ 1.94
LITAF-220ENST00000620789 ARHGAP23Q9P227 1491 aa27.16■■□□□ 1.94
LITAF-220ENST00000620789 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
LITAF-220ENST00000620789 TMEM131LA2VDJ0 1609 aa27.14■■□□□ 1.94
LITAF-220ENST00000620789 TMEM2Q9UHN6 1383 aa27.13■■□□□ 1.93
LITAF-220ENST00000620789 TRIM26Q12899 539 aaPredicted RBP27.11■■□□□ 1.93
LITAF-220ENST00000620789 MYO5BQ9ULV0 1848 aa27.11■■□□□ 1.93
LITAF-220ENST00000620789 CLTCL1P53675 1640 aa27.1■■□□□ 1.93
LITAF-220ENST00000620789 MED14O60244 1454 aa27.1■■□□□ 1.93
LITAF-220ENST00000620789 SCAF11Q99590 1463 aaKnown RBP27.09■■□□□ 1.93
LITAF-220ENST00000620789 FOXD1Q16676 465 aa27.09■■□□□ 1.93
LITAF-220ENST00000620789 CHGAP10645 457 aaKnown RBP27.08■■□□□ 1.93
LITAF-220ENST00000620789 LTKP29376 864 aa27.06■■□□□ 1.92
LITAF-220ENST00000620789 EID1Q9Y6B2 187 aa27.06■■□□□ 1.92
LITAF-220ENST00000620789 NPHP4O75161 1426 aaPredicted RBP27.06■■□□□ 1.92
LITAF-220ENST00000620789 TXNDC2Q86VQ3 553 aa27.05■■□□□ 1.92
LITAF-220ENST00000620789 IQGAP1P46940 1657 aa27.04■■□□□ 1.92
LITAF-220ENST00000620789 ZFYVE9O95405 1425 aa27.02■■□□□ 1.92
LITAF-220ENST00000620789 RIMS2Q9UQ26 1411 aa27.01■■□□□ 1.91
LITAF-220ENST00000620789 KIF1BO60333 1816 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms