RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
VPS45-213ENST00000618148 RICTORQ6R327 1708 aa11.27□□□□□ -0.6
VPS45-213ENST00000618148 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
VPS45-213ENST00000618148 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.61
VPS45-213ENST00000618148 MLH3Q9UHC1 1453 aa11.26□□□□□ -0.61
VPS45-213ENST00000618148 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
VPS45-213ENST00000618148 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
VPS45-213ENST00000618148 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
VPS45-213ENST00000618148 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
VPS45-213ENST00000618148 ITGAEP38570 1179 aa11.25□□□□□ -0.61
VPS45-213ENST00000618148 COL17A1Q9UMD9 1497 aaPredicted RBP11.24□□□□□ -0.61
VPS45-213ENST00000618148 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
VPS45-213ENST00000618148 HRCP23327 699 aa11.24□□□□□ -0.61
VPS45-213ENST00000618148 AFAP1Q8N556 730 aa11.24□□□□□ -0.61
VPS45-213ENST00000618148 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
VPS45-213ENST00000618148 KIDINS220Q9ULH0 1771 aa11.24□□□□□ -0.61
VPS45-213ENST00000618148 HAX1O00165 279 aa11.24□□□□□ -0.61
VPS45-213ENST00000618148 MAGI2Q86UL8 1455 aa11.23□□□□□ -0.61
VPS45-213ENST00000618148 SPAG9O60271 1321 aaKnown RBP11.23□□□□□ -0.61
VPS45-213ENST00000618148 KIF15Q9NS87 1388 aa11.22□□□□□ -0.61
VPS45-213ENST00000618148 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
VPS45-213ENST00000618148 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
VPS45-213ENST00000618148 RAB3GAP2Q9H2M9 1393 aa11.21□□□□□ -0.62
VPS45-213ENST00000618148 RAPGEF3O95398 923 aa11.2□□□□□ -0.62
VPS45-213ENST00000618148 RRP7BPQ9NSQ0 103 aa11.2□□□□□ -0.62
VPS45-213ENST00000618148 ERBINQ96RT1 1412 aa11.2□□□□□ -0.62
VPS45-213ENST00000618148 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
VPS45-213ENST00000618148 KDM6BO15054 1643 aa11.19□□□□□ -0.62
VPS45-213ENST00000618148 ACIN1Q9UKV3 1341 aaKnown RBP11.19□□□□□ -0.62
VPS45-213ENST00000618148 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
VPS45-213ENST00000618148 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
VPS45-213ENST00000618148 REREQ9P2R6 1566 aa11.18□□□□□ -0.62
VPS45-213ENST00000618148 BCORL1Q5H9F3 1711 aa11.17□□□□□ -0.62
VPS45-213ENST00000618148 ARHGEF40Q8TER5 1519 aa11.17□□□□□ -0.62
VPS45-213ENST00000618148 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
VPS45-213ENST00000618148 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS45-213ENST00000618148 DHX29Q7Z478 1369 aaKnown RBP11.17□□□□□ -0.62
VPS45-213ENST00000618148 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
VPS45-213ENST00000618148 A2MP01023 1474 aa11.15□□□□□ -0.62
VPS45-213ENST00000618148 KDM5DQ9BY66 1539 aa11.15□□□□□ -0.62
VPS45-213ENST00000618148 UNC13BO14795 1591 aa11.15□□□□□ -0.62
VPS45-213ENST00000618148 DEPDC5O75140 1603 aa11.14□□□□□ -0.63
VPS45-213ENST00000618148 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
VPS45-213ENST00000618148 ATP10AO60312 1499 aa11.13□□□□□ -0.63
VPS45-213ENST00000618148 AGLP35573 1532 aa11.13□□□□□ -0.63
VPS45-213ENST00000618148 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
VPS45-213ENST00000618148 PRDM15P57071 1507 aaPredicted RBP11.12□□□□□ -0.63
VPS45-213ENST00000618148 DHX57Q6P158 1386 aaKnown RBP11.12□□□□□ -0.63
VPS45-213ENST00000618148 MROH1Q8NDA8 1641 aa11.11□□□□□ -0.63
VPS45-213ENST00000618148 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
VPS45-213ENST00000618148 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
VPS45-213ENST00000618148 PZPP20742 1482 aa11.11□□□□□ -0.63
VPS45-213ENST00000618148 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
VPS45-213ENST00000618148 SIGLEC1Q9BZZ2 1709 aa11.08□□□□□ -0.64
VPS45-213ENST00000618148 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
VPS45-213ENST00000618148 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
VPS45-213ENST00000618148 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
VPS45-213ENST00000618148 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
VPS45-213ENST00000618148 NUP155O75694 1391 aa11.06□□□□□ -0.64
VPS45-213ENST00000618148 KIF3BO15066 747 aa11.05□□□□□ -0.64
VPS45-213ENST00000618148 MPHOSPH9Q99550 1183 aa11.04□□□□□ -0.64
VPS45-213ENST00000618148 TET3O43151 1660 aa11.03□□□□□ -0.64
VPS45-213ENST00000618148 ZC3H13Q5T200 1668 aaKnown RBP11.03□□□□□ -0.64
VPS45-213ENST00000618148 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
VPS45-213ENST00000618148 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
VPS45-213ENST00000618148 ABCC3O15438 1527 aa11.03□□□□□ -0.64
VPS45-213ENST00000618148 KANK1Q14678 1352 aa11.02□□□□□ -0.65
VPS45-213ENST00000618148 EFCAB6Q5THR3 1501 aa11.02□□□□□ -0.65
VPS45-213ENST00000618148 CCER1Q8TC90 406 aaPredicted RBP11.01□□□□□ -0.65
VPS45-213ENST00000618148 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
VPS45-213ENST00000618148 EVX2Q03828 476 aa11□□□□□ -0.65
VPS45-213ENST00000618148 ARHGAP31Q2M1Z3 1444 aa11□□□□□ -0.65
VPS45-213ENST00000618148 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
VPS45-213ENST00000618148 RPRD2Q5VT52 1461 aaKnown RBP10.99□□□□□ -0.65
VPS45-213ENST00000618148 E9PCH4 1651 aa10.99□□□□□ -0.65
VPS45-213ENST00000618148 CEP152O94986 1710 aa10.98□□□□□ -0.65
VPS45-213ENST00000618148 PTPRTO14522 1441 aa10.98□□□□□ -0.65
VPS45-213ENST00000618148 CAMSAP1Q5T5Y3 1602 aa10.98□□□□□ -0.65
VPS45-213ENST00000618148 PKD2Q13563 968 aa10.98□□□□□ -0.65
VPS45-213ENST00000618148 PLA2R1Q13018 1463 aa10.98□□□□□ -0.65
VPS45-213ENST00000618148 GGT6Q6P531 493 aa10.97□□□□□ -0.65
VPS45-213ENST00000618148 NPATQ14207 1427 aa10.97□□□□□ -0.65
VPS45-213ENST00000618148 TRPM2O94759 1503 aa10.95□□□□□ -0.66
VPS45-213ENST00000618148 CNTLNQ9NXG0 1405 aa10.95□□□□□ -0.66
VPS45-213ENST00000618148 WASHC2CQ9Y4E1 1318 aa10.95□□□□□ -0.66
VPS45-213ENST00000618148 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
VPS45-213ENST00000618148 NOS1P29475 1434 aa10.94□□□□□ -0.66
VPS45-213ENST00000618148 SPHKAPQ2M3C7 1700 aa10.93□□□□□ -0.66
VPS45-213ENST00000618148 CLTCQ00610 1675 aaKnown RBP10.93□□□□□ -0.66
VPS45-213ENST00000618148 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
VPS45-213ENST00000618148 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
VPS45-213ENST00000618148 NEURL4Q96JN8 1562 aa10.91□□□□□ -0.66
VPS45-213ENST00000618148 SPATA31D1Q6ZQQ2 1576 aa10.91□□□□□ -0.66
VPS45-213ENST00000618148 ERVK-7P63135 1459 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 ZEB1P37275 1124 aaPredicted RBP10.9□□□□□ -0.66
VPS45-213ENST00000618148 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
VPS45-213ENST00000618148 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms