RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 MYO3AQ8NEV4 1616 aa26.25■■□□□ 1.79
LTBP4-235ENST00000617753 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
LTBP4-235ENST00000617753 ABCC5O15440 1437 aa26.24■■□□□ 1.79
LTBP4-235ENST00000617753 EIF2AK4Q9P2K8 1649 aaKnown RBP26.24■■□□□ 1.79
LTBP4-235ENST00000617753 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
LTBP4-235ENST00000617753 RNF17Q9BXT8 1623 aaKnown RBP26.22■■□□□ 1.79
LTBP4-235ENST00000617753 DUOX2Q9NRD8 1548 aa26.22■■□□□ 1.79
LTBP4-235ENST00000617753 DAPK1P53355 1430 aa26.22■■□□□ 1.79
LTBP4-235ENST00000617753 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
LTBP4-235ENST00000617753 ZNF142P52746 1687 aaPredicted RBP26.21■■□□□ 1.79
LTBP4-235ENST00000617753 CEP170BQ9Y4F5 1589 aaPredicted RBP26.2■■□□□ 1.79
LTBP4-235ENST00000617753 CAMSAP1Q5T5Y3 1602 aa26.2■■□□□ 1.78
LTBP4-235ENST00000617753 NCOA1Q15788 1441 aa26.2■■□□□ 1.78
LTBP4-235ENST00000617753 KIF15Q9NS87 1388 aa26.2■■□□□ 1.78
LTBP4-235ENST00000617753 PZPP20742 1482 aa26.19■■□□□ 1.78
LTBP4-235ENST00000617753 FBXO41Q8TF61 875 aa26.19■■□□□ 1.78
LTBP4-235ENST00000617753 PTPRTO14522 1441 aa26.16■■□□□ 1.78
LTBP4-235ENST00000617753 RRP7BPQ9NSQ0 103 aa26.16■■□□□ 1.78
LTBP4-235ENST00000617753 TNRQ92752 1358 aa26.16■■□□□ 1.78
LTBP4-235ENST00000617753 ZC3H13Q5T200 1668 aaKnown RBP26.15■■□□□ 1.78
LTBP4-235ENST00000617753 ABCC3O15438 1527 aa26.14■■□□□ 1.78
LTBP4-235ENST00000617753 FBXO31Q5XUX0 539 aaPredicted RBP26.14■■□□□ 1.78
LTBP4-235ENST00000617753 ERBINQ96RT1 1412 aa26.14■■□□□ 1.77
LTBP4-235ENST00000617753 A2ML1A8K2U0 1454 aa26.13■■□□□ 1.77
LTBP4-235ENST00000617753 FAM50AQ14320 339 aaKnown RBP26.13■■□□□ 1.77
LTBP4-235ENST00000617753 MROH1Q8NDA8 1641 aa26.12■■□□□ 1.77
LTBP4-235ENST00000617753 ANKRD30AQ9BXX3 1397 aa26.11■■□□□ 1.77
LTBP4-235ENST00000617753 CERKQ8TCT0 537 aa26.11■■□□□ 1.77
LTBP4-235ENST00000617753 CHIC2Q9UKJ5 165 aa26.11■■□□□ 1.77
LTBP4-235ENST00000617753 PLA2R1Q13018 1463 aa26.11■■□□□ 1.77
LTBP4-235ENST00000617753 NCKAP5LQ9HCH0 1330 aa26.08■■□□□ 1.77
LTBP4-235ENST00000617753 CEP152O94986 1710 aa26.07■■□□□ 1.76
LTBP4-235ENST00000617753 PRDM15P57071 1507 aaPredicted RBP26.06■■□□□ 1.76
LTBP4-235ENST00000617753 PKD2Q13563 968 aa26.06■■□□□ 1.76
LTBP4-235ENST00000617753 NLRP1Q9C000 1473 aa26.04■■□□□ 1.76
LTBP4-235ENST00000617753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.76
LTBP4-235ENST00000617753 ADGRL2O95490 1459 aa26.02■■□□□ 1.76
LTBP4-235ENST00000617753 DEPDC5O75140 1603 aa26.01■■□□□ 1.75
LTBP4-235ENST00000617753 KANK1Q14678 1352 aa26.01■■□□□ 1.75
LTBP4-235ENST00000617753 SPATA31D1Q6ZQQ2 1576 aa26.01■■□□□ 1.75
LTBP4-235ENST00000617753 ERVK-7P63135 1459 aa26■■□□□ 1.75
LTBP4-235ENST00000617753 UGGT1Q9NYU2 1555 aa25.98■■□□□ 1.75
LTBP4-235ENST00000617753 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
LTBP4-235ENST00000617753 THEMISQ8N1K5 641 aaPredicted RBP25.96■■□□□ 1.75
LTBP4-235ENST00000617753 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.74
LTBP4-235ENST00000617753 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.74
LTBP4-235ENST00000617753 LTBP4Q8N2S1 1624 aa25.94■■□□□ 1.74
LTBP4-235ENST00000617753 ARHGAP31Q2M1Z3 1444 aa25.94■■□□□ 1.74
LTBP4-235ENST00000617753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.94■■□□□ 1.74
LTBP4-235ENST00000617753 ANKRD50Q9ULJ7 1429 aa25.92■■□□□ 1.74
LTBP4-235ENST00000617753 ANKLE2Q86XL3 938 aa25.91■■□□□ 1.74
LTBP4-235ENST00000617753 ZNF335Q9H4Z2 1342 aaPredicted RBP25.89■■□□□ 1.74
LTBP4-235ENST00000617753 LMTK2Q8IWU2 1503 aa25.88■■□□□ 1.73
LTBP4-235ENST00000617753 VWDEQ8N2E2 1590 aa25.88■■□□□ 1.73
LTBP4-235ENST00000617753 NEURL4Q96JN8 1562 aa25.88■■□□□ 1.73
LTBP4-235ENST00000617753 ROCK1Q13464 1354 aa25.84■■□□□ 1.73
LTBP4-235ENST00000617753 ITGAEP38570 1179 aa25.84■■□□□ 1.73
LTBP4-235ENST00000617753 IQSEC2Q5JU85 1478 aa25.84■■□□□ 1.73
LTBP4-235ENST00000617753 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.73
LTBP4-235ENST00000617753 EFCAB6Q5THR3 1501 aa25.83■■□□□ 1.72
LTBP4-235ENST00000617753 NPHP4O75161 1426 aaPredicted RBP25.81■■□□□ 1.72
LTBP4-235ENST00000617753 MED14O60244 1454 aa25.79■■□□□ 1.72
LTBP4-235ENST00000617753 IQGAP1P46940 1657 aa25.77■■□□□ 1.72
LTBP4-235ENST00000617753 STAG3Q9UJ98 1225 aa25.77■■□□□ 1.72
LTBP4-235ENST00000617753 UNC13BO14795 1591 aa25.77■■□□□ 1.72
LTBP4-235ENST00000617753 PIK3C2BO00750 1634 aa25.77■■□□□ 1.72
LTBP4-235ENST00000617753 TET3O43151 1660 aa25.74■■□□□ 1.71
LTBP4-235ENST00000617753 SYNMO15061 1565 aa25.74■■□□□ 1.71
LTBP4-235ENST00000617753 RPRD2Q5VT52 1461 aaKnown RBP25.74■■□□□ 1.71
LTBP4-235ENST00000617753 SCAF11Q99590 1463 aaKnown RBP25.74■■□□□ 1.71
LTBP4-235ENST00000617753 NOS1P29475 1434 aa25.73■■□□□ 1.71
LTBP4-235ENST00000617753 SLIT1O75093 1534 aa25.73■■□□□ 1.71
LTBP4-235ENST00000617753 CPS1P31327 1500 aa25.72■■□□□ 1.71
LTBP4-235ENST00000617753 ARHGAP23Q9P227 1491 aa25.72■■□□□ 1.71
LTBP4-235ENST00000617753 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
LTBP4-235ENST00000617753 IDI1Q13907 227 aa25.71■■□□□ 1.71
LTBP4-235ENST00000617753 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
LTBP4-235ENST00000617753 EID1Q9Y6B2 187 aa25.71■■□□□ 1.71
LTBP4-235ENST00000617753 GCC2Q8IWJ2 1684 aa25.71■■□□□ 1.71
LTBP4-235ENST00000617753 KDM5AP29375 1690 aaKnown RBP25.7■■□□□ 1.7
LTBP4-235ENST00000617753 TMEM2Q9UHN6 1383 aa25.69■■□□□ 1.7
LTBP4-235ENST00000617753 SLC52A1Q9NWF4 448 aa25.68■■□□□ 1.7
LTBP4-235ENST00000617753 UBAP1LF5GYI3 381 aa25.67■■□□□ 1.7
LTBP4-235ENST00000617753 LTKP29376 864 aa25.67■■□□□ 1.7
LTBP4-235ENST00000617753 ADGRB3O60242 1522 aa25.67■■□□□ 1.7
LTBP4-235ENST00000617753 IQGAP3Q86VI3 1631 aa25.66■■□□□ 1.7
LTBP4-235ENST00000617753 NUP155O75694 1391 aa25.65■■□□□ 1.7
LTBP4-235ENST00000617753 E9PCH4 1651 aa25.61■■□□□ 1.69
LTBP4-235ENST00000617753 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
LTBP4-235ENST00000617753 TOM1O60784 492 aa25.53■■□□□ 1.68
LTBP4-235ENST00000617753 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
LTBP4-235ENST00000617753 NAIPQ13075 1403 aa25.53■■□□□ 1.68
LTBP4-235ENST00000617753 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
LTBP4-235ENST00000617753 SCAF1Q9H7N4 1312 aaKnown RBP25.52■■□□□ 1.68
LTBP4-235ENST00000617753 LRRC7Q96NW7 1537 aa25.52■■□□□ 1.68
LTBP4-235ENST00000617753 TMEM131LA2VDJ0 1609 aa25.52■■□□□ 1.68
LTBP4-235ENST00000617753 BCANQ96GW7 911 aa25.51■■□□□ 1.67
LTBP4-235ENST00000617753 RIMS2Q9UQ26 1411 aa25.49■■□□□ 1.67
LTBP4-235ENST00000617753 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
LTBP4-235ENST00000617753 HDGFP51858 240 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms