RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.93
CFHR3-206ENST00000617219 MAP3K9P80192 1104 aa9.21□□□□□ -0.94
CFHR3-206ENST00000617219 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
CFHR3-206ENST00000617219 SLC34A2O95436 690 aa9.2□□□□□ -0.94
CFHR3-206ENST00000617219 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
CFHR3-206ENST00000617219 DPYSL4O14531 572 aa9.18□□□□□ -0.94
CFHR3-206ENST00000617219 INSM1Q01101 510 aaPredicted RBP9.18□□□□□ -0.94
CFHR3-206ENST00000617219 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
CFHR3-206ENST00000617219 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
CFHR3-206ENST00000617219 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
CFHR3-206ENST00000617219 SPDYE16A6NNV3 312 aaPredicted RBP9.16□□□□□ -0.94
CFHR3-206ENST00000617219 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.95
CFHR3-206ENST00000617219 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
CFHR3-206ENST00000617219 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
CFHR3-206ENST00000617219 PDIA6Q15084 440 aa9.13□□□□□ -0.95
CFHR3-206ENST00000617219 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
CFHR3-206ENST00000617219 EVI5O60447 810 aa9.11□□□□□ -0.95
CFHR3-206ENST00000617219 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
CFHR3-206ENST00000617219 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
CFHR3-206ENST00000617219 SMYD5Q6GMV2 418 aa9.1□□□□□ -0.95
CFHR3-206ENST00000617219 SEMA3EO15041 775 aa9.08□□□□□ -0.96
CFHR3-206ENST00000617219 WIPF1O43516 503 aa9.08□□□□□ -0.96
CFHR3-206ENST00000617219 KRTAP9-2Q9BYQ4 174 aa9.07□□□□□ -0.96
CFHR3-206ENST00000617219 TESPA1A2RU30 521 aaPredicted RBP9.06□□□□□ -0.96
CFHR3-206ENST00000617219 NUDT7P0C024 238 aa9.06□□□□□ -0.96
CFHR3-206ENST00000617219 KRTAP1-3Q8IUG1 177 aa9.04□□□□□ -0.96
CFHR3-206ENST00000617219 ANO8Q9HCE9 1232 aaPredicted RBP9.04□□□□□ -0.96
CFHR3-206ENST00000617219 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.96
CFHR3-206ENST00000617219 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.96
CFHR3-206ENST00000617219 POTECB2RU33 542 aa9.02□□□□□ -0.96
CFHR3-206ENST00000617219 MLLT3P42568 568 aaPredicted RBP9.02□□□□□ -0.97
CFHR3-206ENST00000617219 DDX12PQ92771 950 aa9.01□□□□□ -0.97
CFHR3-206ENST00000617219 KDM4FA0A1W2PPD8 638 aa9□□□□□ -0.97
CFHR3-206ENST00000617219 PSDA5PKW4 1024 aaPredicted RBP9□□□□□ -0.97
CFHR3-206ENST00000617219 WFS1O76024 890 aa9□□□□□ -0.97
CFHR3-206ENST00000617219 PSEN2P49810 448 aa9□□□□□ -0.97
CFHR3-206ENST00000617219 EPAS1Q99814 870 aa9□□□□□ -0.97
CFHR3-206ENST00000617219 PHF14O94880 888 aa8.99□□□□□ -0.97
CFHR3-206ENST00000617219 JPH4Q96JJ6 628 aa8.98□□□□□ -0.97
CFHR3-206ENST00000617219 XP32Q5T750 250 aa8.97□□□□□ -0.97
CFHR3-206ENST00000617219 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
CFHR3-206ENST00000617219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
CFHR3-206ENST00000617219 ZNF454Q8N9F8 522 aa8.97□□□□□ -0.97
CFHR3-206ENST00000617219 FBXW7Q969H0 707 aa8.96□□□□□ -0.97
CFHR3-206ENST00000617219 PPP4R3BQ5MIZ7 849 aa8.96□□□□□ -0.98
CFHR3-206ENST00000617219 TYW1BQ6NUM6 668 aa8.96□□□□□ -0.98
CFHR3-206ENST00000617219 FOSBP53539 338 aa8.95□□□□□ -0.98
CFHR3-206ENST00000617219 OSBPP22059 807 aa8.94□□□□□ -0.98
CFHR3-206ENST00000617219 ZDHHC16Q969W1 377 aa8.94□□□□□ -0.98
CFHR3-206ENST00000617219 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
CFHR3-206ENST00000617219 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
CFHR3-206ENST00000617219 RBM26Q5T8P6 1007 aaKnown RBP8.92□□□□□ -0.98
CFHR3-206ENST00000617219 WNT2BQ93097 391 aa8.92□□□□□ -0.98
CFHR3-206ENST00000617219 PRKD2Q9BZL6 878 aa8.92□□□□□ -0.98
CFHR3-206ENST00000617219 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
CFHR3-206ENST00000617219 MAP3K7O43318 606 aa8.91□□□□□ -0.98
CFHR3-206ENST00000617219 EN1Q05925 392 aaPredicted RBP8.91□□□□□ -0.98
CFHR3-206ENST00000617219 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
CFHR3-206ENST00000617219 NUTM2FA1L443 756 aa8.9□□□□□ -0.98
CFHR3-206ENST00000617219 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
CFHR3-206ENST00000617219 KCNC4Q03721 635 aa8.89□□□□□ -0.99
CFHR3-206ENST00000617219 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
CFHR3-206ENST00000617219 RB1CC1Q8TDY2 1594 aa8.89□□□□□ -0.99
CFHR3-206ENST00000617219 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
CFHR3-206ENST00000617219 TPRNQ4KMQ1 711 aa8.87□□□□□ -0.99
CFHR3-206ENST00000617219 V9GY48 417 aaPredicted RBP8.87□□□□□ -0.99
CFHR3-206ENST00000617219 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
CFHR3-206ENST00000617219 PTPREP23469 700 aa8.86□□□□□ -0.99
CFHR3-206ENST00000617219 PSMG3-AS1Q96PY0 264 aa8.86□□□□□ -0.99
CFHR3-206ENST00000617219 ADAM33Q9BZ11 813 aa8.86□□□□□ -0.99
CFHR3-206ENST00000617219 BCL2L12Q9HB09 334 aa8.86□□□□□ -0.99
CFHR3-206ENST00000617219 FCHSD2O94868 740 aa8.85□□□□□ -0.99
CFHR3-206ENST00000617219 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
CFHR3-206ENST00000617219 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
CFHR3-206ENST00000617219 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
CFHR3-206ENST00000617219 NACADO15069 1562 aa8.84□□□□□ -0.99
CFHR3-206ENST00000617219 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
CFHR3-206ENST00000617219 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
CFHR3-206ENST00000617219 MYT1Q01538 1121 aa8.82□□□□□ -1
CFHR3-206ENST00000617219 PTGDRQ13258 359 aa8.81□□□□□ -1
CFHR3-206ENST00000617219 HIC1Q14526 733 aa8.81□□□□□ -1
CFHR3-206ENST00000617219 KCNK17Q96T54 332 aa8.81□□□□□ -1
CFHR3-206ENST00000617219 CDHR5Q9HBB8 845 aa8.81□□□□□ -1
CFHR3-206ENST00000617219 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
CFHR3-206ENST00000617219 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
CFHR3-206ENST00000617219 BHMG1C9JSJ3 638 aaPredicted RBP8.79□□□□□ -1
CFHR3-206ENST00000617219 GNPATO15228 680 aa8.79□□□□□ -1
CFHR3-206ENST00000617219 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
CFHR3-206ENST00000617219 GPR37O15354 613 aa8.77□□□□□ -1
CFHR3-206ENST00000617219 ZMYND10O75800 440 aa8.77□□□□□ -1
CFHR3-206ENST00000617219 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
CFHR3-206ENST00000617219 ZCCHC6Q5VYS8 1495 aaKnown RBP8.76□□□□□ -1.01
CFHR3-206ENST00000617219 BARGINQ6ZT62 677 aa8.76□□□□□ -1.01
CFHR3-206ENST00000617219 RBM27Q9P2N5 1060 aaKnown RBP8.76□□□□□ -1.01
CFHR3-206ENST00000617219 PRKCSHP14314 528 aaPredicted RBP8.75□□□□□ -1.01
CFHR3-206ENST00000617219 COL9A1P20849 921 aa8.75□□□□□ -1.01
CFHR3-206ENST00000617219 PRSS12P56730 875 aa8.75□□□□□ -1.01
CFHR3-206ENST00000617219 CDCA7LQ96GN5 454 aa8.74□□□□□ -1.01
CFHR3-206ENST00000617219 MAP2K5Q13163 448 aa8.73□□□□□ -1.01
CFHR3-206ENST00000617219 SLC4A5Q9BY07 1137 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms