RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
CFHR3-206ENST00000617219 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
CFHR3-206ENST00000617219 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
CFHR3-206ENST00000617219 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
CFHR3-206ENST00000617219 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
CFHR3-206ENST00000617219 FOXD1Q16676 465 aa20.07■□□□□ 0.8
CFHR3-206ENST00000617219 MSH5O43196 834 aa19.62■□□□□ 0.73
CFHR3-206ENST00000617219 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
CFHR3-206ENST00000617219 CACNB1Q02641 598 aaPredicted RBP18.01■□□□□ 0.47
CFHR3-206ENST00000617219 POTEHQ6S545 545 aa17.24■□□□□ 0.35
CFHR3-206ENST00000617219 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
CFHR3-206ENST00000617219 ADRA2BP18089 450 aa17.01■□□□□ 0.31
CFHR3-206ENST00000617219 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
CFHR3-206ENST00000617219 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
CFHR3-206ENST00000617219 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
CFHR3-206ENST00000617219 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
CFHR3-206ENST00000617219 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
CFHR3-206ENST00000617219 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
CFHR3-206ENST00000617219 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
CFHR3-206ENST00000617219 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
CFHR3-206ENST00000617219 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
CFHR3-206ENST00000617219 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
CFHR3-206ENST00000617219 PLSCR2Q9NRY7 297 aa15.01□□□□□ -0.01
CFHR3-206ENST00000617219 DSG3P32926 999 aa14.78□□□□□ -0.04
CFHR3-206ENST00000617219 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
CFHR3-206ENST00000617219 RNF216Q9NWF9 866 aaPredicted RBP14.55□□□□□ -0.08
CFHR3-206ENST00000617219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
CFHR3-206ENST00000617219 CAPN15O75808 1086 aa14.37□□□□□ -0.11
CFHR3-206ENST00000617219 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
CFHR3-206ENST00000617219 LHX8Q68G74 356 aa14.25□□□□□ -0.13
CFHR3-206ENST00000617219 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
CFHR3-206ENST00000617219 HAX1O00165 279 aa14.15□□□□□ -0.14
CFHR3-206ENST00000617219 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
CFHR3-206ENST00000617219 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
CFHR3-206ENST00000617219 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
CFHR3-206ENST00000617219 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
CFHR3-206ENST00000617219 ABCB7O75027 752 aa13.82□□□□□ -0.2
CFHR3-206ENST00000617219 EVX2Q03828 476 aa13.79□□□□□ -0.2
CFHR3-206ENST00000617219 KCNA4P22459 653 aa13.74□□□□□ -0.21
CFHR3-206ENST00000617219 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
CFHR3-206ENST00000617219 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
CFHR3-206ENST00000617219 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
CFHR3-206ENST00000617219 POTEMA6NI47 508 aa13.53□□□□□ -0.24
CFHR3-206ENST00000617219 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
CFHR3-206ENST00000617219 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
CFHR3-206ENST00000617219 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
CFHR3-206ENST00000617219 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
CFHR3-206ENST00000617219 GABBR2O75899 941 aa13.41□□□□□ -0.26
CFHR3-206ENST00000617219 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
CFHR3-206ENST00000617219 APLP2Q06481 763 aa13.39□□□□□ -0.27
CFHR3-206ENST00000617219 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
CFHR3-206ENST00000617219 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
CFHR3-206ENST00000617219 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
CFHR3-206ENST00000617219 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
CFHR3-206ENST00000617219 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
CFHR3-206ENST00000617219 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
CFHR3-206ENST00000617219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
CFHR3-206ENST00000617219 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
CFHR3-206ENST00000617219 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
CFHR3-206ENST00000617219 POLA2Q14181 598 aa12.84□□□□□ -0.35
CFHR3-206ENST00000617219 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CFHR3-206ENST00000617219 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
CFHR3-206ENST00000617219 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
CFHR3-206ENST00000617219 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
CFHR3-206ENST00000617219 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
CFHR3-206ENST00000617219 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
CFHR3-206ENST00000617219 CLCN6P51797 869 aa12.62□□□□□ -0.39
CFHR3-206ENST00000617219 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
CFHR3-206ENST00000617219 ZBTB22O15209 634 aa12.59□□□□□ -0.39
CFHR3-206ENST00000617219 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
CFHR3-206ENST00000617219 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
CFHR3-206ENST00000617219 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
CFHR3-206ENST00000617219 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
CFHR3-206ENST00000617219 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
CFHR3-206ENST00000617219 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
CFHR3-206ENST00000617219 MMRN1Q13201 1228 aa12.39□□□□□ -0.43
CFHR3-206ENST00000617219 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.44
CFHR3-206ENST00000617219 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
CFHR3-206ENST00000617219 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
CFHR3-206ENST00000617219 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
CFHR3-206ENST00000617219 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
CFHR3-206ENST00000617219 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
CFHR3-206ENST00000617219 SPNS2Q8IVW8 549 aa12.19□□□□□ -0.46
CFHR3-206ENST00000617219 POTEJP0CG39 1038 aa12.08□□□□□ -0.47
CFHR3-206ENST00000617219 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
CFHR3-206ENST00000617219 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
CFHR3-206ENST00000617219 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
CFHR3-206ENST00000617219 GALR2O43603 387 aaPredicted RBP11.96□□□□□ -0.49
CFHR3-206ENST00000617219 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
CFHR3-206ENST00000617219 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
CFHR3-206ENST00000617219 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
CFHR3-206ENST00000617219 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
CFHR3-206ENST00000617219 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
CFHR3-206ENST00000617219 FARP1Q9Y4F1 1045 aaPredicted RBP11.85□□□□□ -0.51
CFHR3-206ENST00000617219 C7P10643 843 aa11.81□□□□□ -0.52
CFHR3-206ENST00000617219 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
CFHR3-206ENST00000617219 SLC39A7Q92504 469 aa11.77□□□□□ -0.52
CFHR3-206ENST00000617219 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
CFHR3-206ENST00000617219 ST18O60284 1047 aa11.67□□□□□ -0.54
CFHR3-206ENST00000617219 FBLN2P98095 1184 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms