RNA–Protein interactions for RNA: ENST00000616704.4

ELK4-204, Transcript of ELK4, ETS transcription factor, human

TSL 2

Gene ELK4, Length 2,535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELK4-204	ENST00000616704	NOP58	Q9Y2X3	529 aa	Known RBP	34.01	■■■■□ 3.03
ELK4-204	ENST00000616704	RSPH4A	Q5TD94	716 aa		33.99	■■■■□ 3.03
ELK4-204	ENST00000616704	RNF123	Q5XPI4	1314 aa		33.99	■■■■□ 3.03
ELK4-204	ENST00000616704	USP47	Q96K76	1375 aa		33.99	■■■■□ 3.03
ELK4-204	ENST00000616704	NUP155	O75694	1391 aa		33.98	■■■■□ 3.03
ELK4-204	ENST00000616704	PKD2	Q13563	968 aa		33.98	■■■■□ 3.03
ELK4-204	ENST00000616704	WDR7	Q9Y4E6	1490 aa		33.97	■■■■□ 3.03
ELK4-204	ENST00000616704	EFCAB2	Q5VUJ9	269 aa		33.96	■■■■□ 3.03
ELK4-204	ENST00000616704	ZNF326	Q5BKZ1	582 aa	Known RBP	33.95	■■■■□ 3.03
ELK4-204	ENST00000616704	CCDC136	Q96JN2	1154 aa		33.95	■■■■□ 3.03
ELK4-204	ENST00000616704	BCORL1	Q5H9F3	1711 aa		33.94	■■■■□ 3.02
ELK4-204	ENST00000616704	KIAA1107	Q9UPP5	1409 aa		33.93	■■■■□ 3.02
ELK4-204	ENST00000616704	DEK	P35659	375 aa	Known RBP	33.92	■■■■□ 3.02
ELK4-204	ENST00000616704	PAK3	O75914	559 aa	Predicted RBP	33.92	■■■■□ 3.02
ELK4-204	ENST00000616704	PLEKHH2	Q8IVE3	1493 aa		33.9	■■■■□ 3.02
ELK4-204	ENST00000616704	SENP3-EIF4A1	A0A087X0R7	540 aa		33.89	■■■■□ 3.02
ELK4-204	ENST00000616704	ASXL2	Q76L83	1435 aa		33.89	■■■■□ 3.02
ELK4-204	ENST00000616704	TRAPPC8	Q9Y2L5	1435 aa		33.87	■■■■□ 3.01
ELK4-204	ENST00000616704	PNISR	Q8TF01	805 aa	Known RBP	33.86	■■■■□ 3.01
ELK4-204	ENST00000616704	ABCC1	P33527	1531 aa		33.85	■■■■□ 3.01
ELK4-204	ENST00000616704	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.85	■■■■□ 3.01
ELK4-204	ENST00000616704	MAST1	Q9Y2H9	1570 aa		33.85	■■■■□ 3.01
ELK4-204	ENST00000616704	NBR1	Q14596	966 aa		33.83	■■■■□ 3.01
ELK4-204	ENST00000616704	KDM5C	P41229	1560 aa		33.83	■■■■□ 3.01
ELK4-204	ENST00000616704	AFAP1	Q8N556	730 aa		33.82	■■■■□ 3
ELK4-204	ENST00000616704	TMC1	Q8TDI8	760 aa		33.81	■■■■□ 3
ELK4-204	ENST00000616704	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.8	■■■■□ 3	3e-7	■■□□□ 13.1
ELK4-204	ENST00000616704	NPM1	P06748	294 aa	Known RBP eCLIP	33.79	■■■■□ 3
ELK4-204	ENST00000616704	ANP32A	P39687	249 aa	Known RBP	33.78	■■■■□ 3
ELK4-204	ENST00000616704	KDM5D	Q9BY66	1539 aa		33.77	■■■■□ 3
ELK4-204	ENST00000616704	ROCK2	O75116	1388 aa	Known RBP	33.77	■■■■□ 3
ELK4-204	ENST00000616704	ABCA9	Q8IUA7	1624 aa		33.76	■■■■□ 3
ELK4-204	ENST00000616704	FANCA	O15360	1455 aa		33.76	■■■□□ 2.99
ELK4-204	ENST00000616704	PLXNC1	O60486	1568 aa		33.76	■■■□□ 2.99
ELK4-204	ENST00000616704	IPO9	Q96P70	1041 aa	Known RBP	33.76	■■■□□ 2.99
ELK4-204	ENST00000616704	FAM135A	Q9P2D6	1515 aa		33.73	■■■□□ 2.99
ELK4-204	ENST00000616704	ARAP3	Q8WWN8	1544 aa		33.72	■■■□□ 2.99
ELK4-204	ENST00000616704	RALGAPB	Q86X10	1494 aa		33.71	■■■□□ 2.99
ELK4-204	ENST00000616704	UHRF1BP1	Q6BDS2	1440 aa		33.7	■■■□□ 2.99
ELK4-204	ENST00000616704	CARD11	Q9BXL7	1154 aa		33.7	■■■□□ 2.99
ELK4-204	ENST00000616704	SPAG9	O60271	1321 aa	Known RBP	33.69	■■■□□ 2.98
ELK4-204	ENST00000616704	LRPPRC	P42704	1394 aa	Known RBP	33.68	■■■□□ 2.98
ELK4-204	ENST00000616704	DUOX2	Q9NRD8	1548 aa		33.67	■■■□□ 2.98
ELK4-204	ENST00000616704	ZBTB47	Q9UFB7	747 aa	Predicted RBP	33.64	■■■□□ 2.98
ELK4-204	ENST00000616704	UNC13B	O14795	1591 aa		33.64	■■■□□ 2.98
ELK4-204	ENST00000616704	BRD4	O60885	1362 aa	Predicted RBP	33.63	■■■□□ 2.97
ELK4-204	ENST00000616704	ADGRL1	O94910	1474 aa		33.63	■■■□□ 2.97
ELK4-204	ENST00000616704	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.62	■■■□□ 2.97
ELK4-204	ENST00000616704	SCAPER	Q9BY12	1400 aa		33.61	■■■□□ 2.97
ELK4-204	ENST00000616704	ZFYVE16	Q7Z3T8	1539 aa		33.6	■■■□□ 2.97
ELK4-204	ENST00000616704	ST20-MTHFS	A0A0A6YYL1	179 aa		33.6	■■■□□ 2.97
ELK4-204	ENST00000616704	RRP1	P56182	461 aa	Known RBP	33.59	■■■□□ 2.97
ELK4-204	ENST00000616704	ERBIN	Q96RT1	1412 aa		33.59	■■■□□ 2.97
ELK4-204	ENST00000616704	CYB5RL	Q6IPT4	315 aa		33.58	■■■□□ 2.97
ELK4-204	ENST00000616704	RALBP1	Q15311	655 aa		33.57	■■■□□ 2.97
ELK4-204	ENST00000616704	KDM2A	Q9Y2K7	1162 aa		33.56	■■■□□ 2.96
ELK4-204	ENST00000616704	KTN1	Q86UP2	1357 aa	Known RBP	33.56	■■■□□ 2.96
ELK4-204	ENST00000616704	EXOC6	Q8TAG9	804 aa		33.55	■■■□□ 2.96
ELK4-204	ENST00000616704	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.53	■■■□□ 2.96
ELK4-204	ENST00000616704	IQGAP3	Q86VI3	1631 aa		33.52	■■■□□ 2.96
ELK4-204	ENST00000616704	CD109	Q6YHK3	1445 aa		33.51	■■■□□ 2.96
ELK4-204	ENST00000616704	RTL5	Q5HYW3	569 aa	Predicted RBP	33.51	■■■□□ 2.95
ELK4-204	ENST00000616704	ATP7A	Q04656	1500 aa		33.5	■■■□□ 2.95
ELK4-204	ENST00000616704	RCAN3	Q9UKA8	241 aa		33.5	■■■□□ 2.95
ELK4-204	ENST00000616704	DCAF11	Q8TEB1	546 aa		33.48	■■■□□ 2.95
ELK4-204	ENST00000616704	PLA2R1	Q13018	1463 aa		33.48	■■■□□ 2.95
ELK4-204	ENST00000616704	MAGI2	Q86UL8	1455 aa		33.48	■■■□□ 2.95
ELK4-204	ENST00000616704	SALL2	Q9Y467	1007 aa	Predicted RBP	33.48	■■■□□ 2.95
ELK4-204	ENST00000616704	INO80	Q9ULG1	1556 aa	Predicted RBP	33.47	■■■□□ 2.95
ELK4-204	ENST00000616704	CCDC144A	A2RUR9	1427 aa		33.45	■■■□□ 2.94
ELK4-204	ENST00000616704	TCERG1	O14776	1098 aa	Known RBP	33.44	■■■□□ 2.94
ELK4-204	ENST00000616704		E9PCH4	1651 aa		33.44	■■■□□ 2.94
ELK4-204	ENST00000616704	NPM2	Q86SE8	214 aa	Known RBP	33.44	■■■□□ 2.94
ELK4-204	ENST00000616704	RGL3	Q3MIN7	710 aa		33.43	■■■□□ 2.94
ELK4-204	ENST00000616704	NLRP13	Q86W25	1043 aa		33.42	■■■□□ 2.94
ELK4-204	ENST00000616704	RIMBP3C	A6NJZ7	1639 aa		33.39	■■■□□ 2.94
ELK4-204	ENST00000616704	RIMBP3B	A6NNM3	1639 aa		33.39	■■■□□ 2.94
ELK4-204	ENST00000616704	RIMBP3	Q9UFD9	1639 aa		33.39	■■■□□ 2.94
ELK4-204	ENST00000616704	KIF3B	O15066	747 aa		33.39	■■■□□ 2.94
ELK4-204	ENST00000616704	PARD3	Q8TEW0	1356 aa		33.38	■■■□□ 2.93
ELK4-204	ENST00000616704	PDE4A	P27815	886 aa		33.38	■■■□□ 2.93
ELK4-204	ENST00000616704	PDE3B	Q13370	1112 aa		33.38	■■■□□ 2.93
ELK4-204	ENST00000616704	KIDINS220	Q9ULH0	1771 aa		33.36	■■■□□ 2.93
ELK4-204	ENST00000616704	ZNF518A	Q6AHZ1	1483 aa		33.34	■■■□□ 2.93
ELK4-204	ENST00000616704	CDCA7L	Q96GN5	454 aa		33.32	■■■□□ 2.92
ELK4-204	ENST00000616704	BACH2	Q9BYV9	841 aa		33.32	■■■□□ 2.92
ELK4-204	ENST00000616704	MS4A1	P11836	297 aa		33.29	■■■□□ 2.92
ELK4-204	ENST00000616704	DEPDC5	O75140	1603 aa		33.29	■■■□□ 2.92
ELK4-204	ENST00000616704	PER1	O15534	1290 aa	Predicted RBP	33.28	■■■□□ 2.92
ELK4-204	ENST00000616704	RAPGEF3	O95398	923 aa		33.28	■■■□□ 2.92
ELK4-204	ENST00000616704	POGZ	Q7Z3K3	1410 aa		33.27	■■■□□ 2.92
ELK4-204	ENST00000616704	CFAP74	Q9C0B2	1584 aa		33.26	■■■□□ 2.91
ELK4-204	ENST00000616704	PRAG1	Q86YV5	1406 aa		33.25	■■■□□ 2.91
ELK4-204	ENST00000616704	PLIN1	O60240	522 aa		33.23	■■■□□ 2.91
ELK4-204	ENST00000616704	LAS1L	Q9Y4W2	734 aa	Known RBP	33.23	■■■□□ 2.91
ELK4-204	ENST00000616704	ATP10A	O60312	1499 aa		33.23	■■■□□ 2.91
ELK4-204	ENST00000616704	A2M	P01023	1474 aa		33.23	■■■□□ 2.91
ELK4-204	ENST00000616704	NBPF1	Q3BBV0	1214 aa		33.22	■■■□□ 2.91
ELK4-204	ENST00000616704	TRPM1	Q7Z4N2	1603 aa		33.21	■■■□□ 2.91
ELK4-204	ENST00000616704	MROH1	Q8NDA8	1641 aa		33.2	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms