RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
RABGAP1-213ENST00000616002 GGT6Q6P531 493 aa16.47■□□□□ 0.23
RABGAP1-213ENST00000616002 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
RABGAP1-213ENST00000616002 PLXNC1O60486 1568 aa16.46■□□□□ 0.23
RABGAP1-213ENST00000616002 MTUS2Q5JR59 1369 aa16.46■□□□□ 0.23
RABGAP1-213ENST00000616002 PKD2Q13563 968 aa16.45■□□□□ 0.22
RABGAP1-213ENST00000616002 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
RABGAP1-213ENST00000616002 ZNF335Q9H4Z2 1342 aaPredicted RBP16.44■□□□□ 0.22
RABGAP1-213ENST00000616002 ZNF142P52746 1687 aaPredicted RBP16.44■□□□□ 0.22
RABGAP1-213ENST00000616002 PLA2R1Q13018 1463 aa16.44■□□□□ 0.22
RABGAP1-213ENST00000616002 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
RABGAP1-213ENST00000616002 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
RABGAP1-213ENST00000616002 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
RABGAP1-213ENST00000616002 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
RABGAP1-213ENST00000616002 NEUROD1Q13562 356 aa16.42■□□□□ 0.22
RABGAP1-213ENST00000616002 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
RABGAP1-213ENST00000616002 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
RABGAP1-213ENST00000616002 ZBTB22O15209 634 aa16.39■□□□□ 0.21
RABGAP1-213ENST00000616002 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
RABGAP1-213ENST00000616002 TIAM1Q13009 1591 aa16.37■□□□□ 0.21
RABGAP1-213ENST00000616002 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
RABGAP1-213ENST00000616002 RTEL1-TNFRSF6BF6WH68 1400 aa16.36■□□□□ 0.21
RABGAP1-213ENST00000616002 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
RABGAP1-213ENST00000616002 MBD5Q9P267 1494 aa16.36■□□□□ 0.21
RABGAP1-213ENST00000616002 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
RABGAP1-213ENST00000616002 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
RABGAP1-213ENST00000616002 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
RABGAP1-213ENST00000616002 KIF3BO15066 747 aa16.33■□□□□ 0.2
RABGAP1-213ENST00000616002 TNRQ92752 1358 aa16.31■□□□□ 0.2
RABGAP1-213ENST00000616002 FBXO31Q5XUX0 539 aaPredicted RBP16.3■□□□□ 0.2
RABGAP1-213ENST00000616002 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
RABGAP1-213ENST00000616002 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
RABGAP1-213ENST00000616002 WASHC2CQ9Y4E1 1318 aa16.3■□□□□ 0.2
RABGAP1-213ENST00000616002 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
RABGAP1-213ENST00000616002 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
RABGAP1-213ENST00000616002 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
RABGAP1-213ENST00000616002 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
RABGAP1-213ENST00000616002 PZPP20742 1482 aa16.28■□□□□ 0.2
RABGAP1-213ENST00000616002 TOM1O60784 492 aa16.27■□□□□ 0.2
RABGAP1-213ENST00000616002 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
RABGAP1-213ENST00000616002 CPS1P31327 1500 aa16.27■□□□□ 0.2
RABGAP1-213ENST00000616002 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.2
RABGAP1-213ENST00000616002 ANKLE2Q86XL3 938 aa16.26■□□□□ 0.19
RABGAP1-213ENST00000616002 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
RABGAP1-213ENST00000616002 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
RABGAP1-213ENST00000616002 SHANK2Q9UPX8 1470 aa16.26■□□□□ 0.19
RABGAP1-213ENST00000616002 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
RABGAP1-213ENST00000616002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
RABGAP1-213ENST00000616002 HSPA1LP34931 641 aa16.25■□□□□ 0.19
RABGAP1-213ENST00000616002 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
RABGAP1-213ENST00000616002 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
RABGAP1-213ENST00000616002 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
RABGAP1-213ENST00000616002 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
RABGAP1-213ENST00000616002 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
RABGAP1-213ENST00000616002 UGGT1Q9NYU2 1555 aa16.23■□□□□ 0.19
RABGAP1-213ENST00000616002 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.18
RABGAP1-213ENST00000616002 NPHP4O75161 1426 aaPredicted RBP16.2■□□□□ 0.18
RABGAP1-213ENST00000616002 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
RABGAP1-213ENST00000616002 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
RABGAP1-213ENST00000616002 BCANQ96GW7 911 aa16.2■□□□□ 0.18
RABGAP1-213ENST00000616002 VWDEQ8N2E2 1590 aa16.19■□□□□ 0.18
RABGAP1-213ENST00000616002 MED14O60244 1454 aa16.19■□□□□ 0.18
RABGAP1-213ENST00000616002 DEPDC5O75140 1603 aa16.18■□□□□ 0.18
RABGAP1-213ENST00000616002 MED1Q15648 1581 aaPredicted RBP16.18■□□□□ 0.18
RABGAP1-213ENST00000616002 IQGAP1P46940 1657 aa16.16■□□□□ 0.18
RABGAP1-213ENST00000616002 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
RABGAP1-213ENST00000616002 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.18
RABGAP1-213ENST00000616002 ABCC3O15438 1527 aa16.14■□□□□ 0.17
RABGAP1-213ENST00000616002 MAST1Q9Y2H9 1570 aa16.12■□□□□ 0.17
RABGAP1-213ENST00000616002 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
RABGAP1-213ENST00000616002 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
RABGAP1-213ENST00000616002 EIF2AK4Q9P2K8 1649 aaKnown RBP16.11■□□□□ 0.17
RABGAP1-213ENST00000616002 ALKQ9UM73 1620 aa16.1■□□□□ 0.17
RABGAP1-213ENST00000616002 LRRC7Q96NW7 1537 aa16.09■□□□□ 0.17
RABGAP1-213ENST00000616002 ARXQ96QS3 562 aa16.09■□□□□ 0.17
RABGAP1-213ENST00000616002 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
RABGAP1-213ENST00000616002 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
RABGAP1-213ENST00000616002 SYNMO15061 1565 aa16.08■□□□□ 0.16
RABGAP1-213ENST00000616002 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
RABGAP1-213ENST00000616002 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
RABGAP1-213ENST00000616002 CEP152O94986 1710 aa16.07■□□□□ 0.16
RABGAP1-213ENST00000616002 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
RABGAP1-213ENST00000616002 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
RABGAP1-213ENST00000616002 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
RABGAP1-213ENST00000616002 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
RABGAP1-213ENST00000616002 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
RABGAP1-213ENST00000616002 KANK4Q5T7N3 995 aaPredicted RBP16.04■□□□□ 0.16
RABGAP1-213ENST00000616002 TXNDC2Q86VQ3 553 aa16.04■□□□□ 0.16
RABGAP1-213ENST00000616002 APLP2Q06481 763 aa16.03■□□□□ 0.16
RABGAP1-213ENST00000616002 EID1Q9Y6B2 187 aa16.03■□□□□ 0.16
RABGAP1-213ENST00000616002 LTKP29376 864 aa16.02■□□□□ 0.16
RABGAP1-213ENST00000616002 MIER1Q8N108 512 aa16.02■□□□□ 0.16
RABGAP1-213ENST00000616002 MAP3K1Q13233 1512 aa16.02■□□□□ 0.16
RABGAP1-213ENST00000616002 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
RABGAP1-213ENST00000616002 SLIT1O75093 1534 aa16.01■□□□□ 0.15
RABGAP1-213ENST00000616002 KIF15Q9NS87 1388 aa16.01■□□□□ 0.15
RABGAP1-213ENST00000616002 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
RABGAP1-213ENST00000616002 PRDM15P57071 1507 aaPredicted RBP16.01■□□□□ 0.15
RABGAP1-213ENST00000616002 ERBINQ96RT1 1412 aa16■□□□□ 0.15
RABGAP1-213ENST00000616002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms