RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
RABGAP1-213ENST00000616002 ABCC9O60706 1549 aa23.36■■□□□ 1.33
RABGAP1-213ENST00000616002 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
RABGAP1-213ENST00000616002 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.14
RABGAP1-213ENST00000616002 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.12
RABGAP1-213ENST00000616002 NACADO15069 1562 aa21.93■■□□□ 1.1
RABGAP1-213ENST00000616002 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.09
RABGAP1-213ENST00000616002 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
RABGAP1-213ENST00000616002 UNC13AQ9UPW8 1703 aa21.61■■□□□ 1.05
RABGAP1-213ENST00000616002 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
RABGAP1-213ENST00000616002 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
RABGAP1-213ENST00000616002 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
RABGAP1-213ENST00000616002 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
RABGAP1-213ENST00000616002 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
RABGAP1-213ENST00000616002 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
RABGAP1-213ENST00000616002 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
RABGAP1-213ENST00000616002 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.97
RABGAP1-213ENST00000616002 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
RABGAP1-213ENST00000616002 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
RABGAP1-213ENST00000616002 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
RABGAP1-213ENST00000616002 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
RABGAP1-213ENST00000616002 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
RABGAP1-213ENST00000616002 CUX2O14529 1486 aa20.22■□□□□ 0.83
RABGAP1-213ENST00000616002 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
RABGAP1-213ENST00000616002 ATAD2BQ9ULI0 1458 aa20.15■□□□□ 0.82
RABGAP1-213ENST00000616002 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
RABGAP1-213ENST00000616002 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
RABGAP1-213ENST00000616002 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
RABGAP1-213ENST00000616002 NESP48681 1621 aa20■□□□□ 0.79
RABGAP1-213ENST00000616002 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
RABGAP1-213ENST00000616002 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
RABGAP1-213ENST00000616002 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
RABGAP1-213ENST00000616002 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
RABGAP1-213ENST00000616002 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
RABGAP1-213ENST00000616002 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
RABGAP1-213ENST00000616002 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
RABGAP1-213ENST00000616002 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
RABGAP1-213ENST00000616002 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
RABGAP1-213ENST00000616002 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
RABGAP1-213ENST00000616002 WIZO95785 1651 aa19.53■□□□□ 0.72
RABGAP1-213ENST00000616002 WDR62O43379 1518 aa19.51■□□□□ 0.71
RABGAP1-213ENST00000616002 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
RABGAP1-213ENST00000616002 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
RABGAP1-213ENST00000616002 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
RABGAP1-213ENST00000616002 CFTRP13569 1480 aa19.36■□□□□ 0.69
RABGAP1-213ENST00000616002 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
RABGAP1-213ENST00000616002 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
RABGAP1-213ENST00000616002 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
RABGAP1-213ENST00000616002 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
RABGAP1-213ENST00000616002 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
RABGAP1-213ENST00000616002 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
RABGAP1-213ENST00000616002 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
RABGAP1-213ENST00000616002 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
RABGAP1-213ENST00000616002 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
RABGAP1-213ENST00000616002 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
RABGAP1-213ENST00000616002 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
RABGAP1-213ENST00000616002 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
RABGAP1-213ENST00000616002 SLC24A1O60721 1099 aa18.98■□□□□ 0.63
RABGAP1-213ENST00000616002 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
RABGAP1-213ENST00000616002 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
RABGAP1-213ENST00000616002 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
RABGAP1-213ENST00000616002 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
RABGAP1-213ENST00000616002 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
RABGAP1-213ENST00000616002 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
RABGAP1-213ENST00000616002 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
RABGAP1-213ENST00000616002 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
RABGAP1-213ENST00000616002 CHD1O14646 1710 aa18.83■□□□□ 0.6
RABGAP1-213ENST00000616002 FBLN2P98095 1184 aa18.83■□□□□ 0.6
RABGAP1-213ENST00000616002 EHMT2Q96KQ7 1210 aa18.82■□□□□ 0.6
RABGAP1-213ENST00000616002 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
RABGAP1-213ENST00000616002 TRHP20396 242 aaPredicted RBP18.74■□□□□ 0.59
RABGAP1-213ENST00000616002 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
RABGAP1-213ENST00000616002 RAD54L2Q9Y4B4 1467 aa18.74■□□□□ 0.59
RABGAP1-213ENST00000616002 SOGA1O94964 1423 aa18.73■□□□□ 0.59
RABGAP1-213ENST00000616002 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
RABGAP1-213ENST00000616002 SNAPC4Q5SXM2 1469 aa18.66■□□□□ 0.58
RABGAP1-213ENST00000616002 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
RABGAP1-213ENST00000616002 WDR97A6NE52 1622 aa18.65■□□□□ 0.58
RABGAP1-213ENST00000616002 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.58
RABGAP1-213ENST00000616002 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
RABGAP1-213ENST00000616002 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
RABGAP1-213ENST00000616002 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
RABGAP1-213ENST00000616002 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
RABGAP1-213ENST00000616002 CUX1P39880 1505 aa18.59■□□□□ 0.57
RABGAP1-213ENST00000616002 SYNJ2O15056 1496 aa18.56■□□□□ 0.56
RABGAP1-213ENST00000616002 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
RABGAP1-213ENST00000616002 PBRM1Q86U86 1689 aa18.48■□□□□ 0.55
RABGAP1-213ENST00000616002 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
RABGAP1-213ENST00000616002 ABCA5Q8WWZ7 1642 aa18.41■□□□□ 0.54
RABGAP1-213ENST00000616002 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
RABGAP1-213ENST00000616002 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
RABGAP1-213ENST00000616002 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
RABGAP1-213ENST00000616002 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
RABGAP1-213ENST00000616002 ERCC6L2Q5T890 1561 aa18.29■□□□□ 0.52
RABGAP1-213ENST00000616002 NUP160Q12769 1436 aa18.28■□□□□ 0.52
RABGAP1-213ENST00000616002 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
RABGAP1-213ENST00000616002 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
RABGAP1-213ENST00000616002 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
RABGAP1-213ENST00000616002 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
RABGAP1-213ENST00000616002 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms