RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
PSMB3-208ENST00000613870 KIF3BO15066 747 aa12.5□□□□□ -0.41
PSMB3-208ENST00000613870 NPATQ14207 1427 aa12.49□□□□□ -0.41
PSMB3-208ENST00000613870 DAPK1P53355 1430 aa12.48□□□□□ -0.41
PSMB3-208ENST00000613870 PTPRKQ15262 1439 aa12.48□□□□□ -0.41
PSMB3-208ENST00000613870 RRP7BPQ9NSQ0 103 aa12.48□□□□□ -0.41
PSMB3-208ENST00000613870 ABCC5O15440 1437 aa12.46□□□□□ -0.41
PSMB3-208ENST00000613870 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
PSMB3-208ENST00000613870 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
PSMB3-208ENST00000613870 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
PSMB3-208ENST00000613870 WASHC2CQ9Y4E1 1318 aa12.44□□□□□ -0.42
PSMB3-208ENST00000613870 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
PSMB3-208ENST00000613870 FBXO31Q5XUX0 539 aaPredicted RBP12.44□□□□□ -0.42
PSMB3-208ENST00000613870 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
PSMB3-208ENST00000613870 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
PSMB3-208ENST00000613870 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
PSMB3-208ENST00000613870 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
PSMB3-208ENST00000613870 RNF17Q9BXT8 1623 aaKnown RBP12.43□□□□□ -0.42
PSMB3-208ENST00000613870 ANKRD30AQ9BXX3 1397 aa12.43□□□□□ -0.42
PSMB3-208ENST00000613870 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
PSMB3-208ENST00000613870 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
PSMB3-208ENST00000613870 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
PSMB3-208ENST00000613870 EIF2AK4Q9P2K8 1649 aaKnown RBP12.42□□□□□ -0.42
PSMB3-208ENST00000613870 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
PSMB3-208ENST00000613870 NCOA1Q15788 1441 aa12.42□□□□□ -0.42
PSMB3-208ENST00000613870 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
PSMB3-208ENST00000613870 PZPP20742 1482 aa12.41□□□□□ -0.42
PSMB3-208ENST00000613870 PTPRTO14522 1441 aa12.41□□□□□ -0.42
PSMB3-208ENST00000613870 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
PSMB3-208ENST00000613870 RAB3GAP2Q9H2M9 1393 aa12.41□□□□□ -0.42
PSMB3-208ENST00000613870 MROH1Q8NDA8 1641 aa12.4□□□□□ -0.42
PSMB3-208ENST00000613870 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
PSMB3-208ENST00000613870 ABCC3O15438 1527 aa12.39□□□□□ -0.43
PSMB3-208ENST00000613870 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
PSMB3-208ENST00000613870 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
PSMB3-208ENST00000613870 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
PSMB3-208ENST00000613870 ZC3H13Q5T200 1668 aaKnown RBP12.38□□□□□ -0.43
PSMB3-208ENST00000613870 NCKAP5LQ9HCH0 1330 aa12.38□□□□□ -0.43
PSMB3-208ENST00000613870 HFM1A2PYH4 1435 aa12.38□□□□□ -0.43
PSMB3-208ENST00000613870 CFAP65Q6ZU64 1925 aaKnown RBP12.38□□□□□ -0.43
PSMB3-208ENST00000613870 TNRQ92752 1358 aa12.38□□□□□ -0.43
PSMB3-208ENST00000613870 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
PSMB3-208ENST00000613870 NAIPQ13075 1403 aa12.37□□□□□ -0.43
PSMB3-208ENST00000613870 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
PSMB3-208ENST00000613870 CEP152O94986 1710 aa12.37□□□□□ -0.43
PSMB3-208ENST00000613870 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
PSMB3-208ENST00000613870 DEPDC5O75140 1603 aa12.34□□□□□ -0.43
PSMB3-208ENST00000613870 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
PSMB3-208ENST00000613870 PKD2Q13563 968 aa12.34□□□□□ -0.43
PSMB3-208ENST00000613870 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
PSMB3-208ENST00000613870 ADGRL2O95490 1459 aa12.34□□□□□ -0.43
PSMB3-208ENST00000613870 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
PSMB3-208ENST00000613870 HRCP23327 699 aa12.33□□□□□ -0.44
PSMB3-208ENST00000613870 ERVK-7P63135 1459 aa12.33□□□□□ -0.44
PSMB3-208ENST00000613870 NLRP1Q9C000 1473 aa12.33□□□□□ -0.44
PSMB3-208ENST00000613870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.44
PSMB3-208ENST00000613870 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
PSMB3-208ENST00000613870 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
PSMB3-208ENST00000613870 ARHGAP31Q2M1Z3 1444 aa12.31□□□□□ -0.44
PSMB3-208ENST00000613870 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
PSMB3-208ENST00000613870 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
PSMB3-208ENST00000613870 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
PSMB3-208ENST00000613870 THEMISQ8N1K5 641 aaPredicted RBP12.3□□□□□ -0.44
PSMB3-208ENST00000613870 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
PSMB3-208ENST00000613870 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
PSMB3-208ENST00000613870 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
PSMB3-208ENST00000613870 LMTK2Q8IWU2 1503 aa12.28□□□□□ -0.44
PSMB3-208ENST00000613870 KANK1Q14678 1352 aa12.28□□□□□ -0.44
PSMB3-208ENST00000613870 DHX57Q6P158 1386 aaKnown RBP12.28□□□□□ -0.44
PSMB3-208ENST00000613870 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
PSMB3-208ENST00000613870 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.45
PSMB3-208ENST00000613870 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
PSMB3-208ENST00000613870 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
PSMB3-208ENST00000613870 NUP155O75694 1391 aa12.25□□□□□ -0.45
PSMB3-208ENST00000613870 MED14O60244 1454 aa12.25□□□□□ -0.45
PSMB3-208ENST00000613870 IQSEC2Q5JU85 1478 aa12.24□□□□□ -0.45
PSMB3-208ENST00000613870 MPHOSPH9Q99550 1183 aa12.24□□□□□ -0.45
PSMB3-208ENST00000613870 EFCAB6Q5THR3 1501 aa12.23□□□□□ -0.45
PSMB3-208ENST00000613870 PIK3C2BO00750 1634 aa12.22□□□□□ -0.45
PSMB3-208ENST00000613870 SYNMO15061 1565 aa12.22□□□□□ -0.45
PSMB3-208ENST00000613870 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
PSMB3-208ENST00000613870 NOS1P29475 1434 aa12.22□□□□□ -0.45
PSMB3-208ENST00000613870 IDI1Q13907 227 aa12.22□□□□□ -0.45
PSMB3-208ENST00000613870 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
PSMB3-208ENST00000613870 UNC13BO14795 1591 aa12.22□□□□□ -0.45
PSMB3-208ENST00000613870 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.45
PSMB3-208ENST00000613870 LTKP29376 864 aa12.21□□□□□ -0.45
PSMB3-208ENST00000613870 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
PSMB3-208ENST00000613870 SLIT1O75093 1534 aa12.21□□□□□ -0.46
PSMB3-208ENST00000613870 TET3O43151 1660 aa12.2□□□□□ -0.46
PSMB3-208ENST00000613870 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
PSMB3-208ENST00000613870 FOXD1Q16676 465 aa12.19□□□□□ -0.46
PSMB3-208ENST00000613870 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
PSMB3-208ENST00000613870 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
PSMB3-208ENST00000613870 TXNDC2Q86VQ3 553 aa12.18□□□□□ -0.46
PSMB3-208ENST00000613870 RPRD2Q5VT52 1461 aaKnown RBP12.18□□□□□ -0.46
PSMB3-208ENST00000613870 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
PSMB3-208ENST00000613870 CPS1P31327 1500 aa12.17□□□□□ -0.46
PSMB3-208ENST00000613870 E9PCH4 1651 aa12.17□□□□□ -0.46
PSMB3-208ENST00000613870 SLC52A1Q9NWF4 448 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms