RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 NCOA2Q15596 1464 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 MIER1Q8N108 512 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 ARID3AQ99856 593 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
SYCP1-209ENST00000613524 PHLDB1Q86UU1 1377 aa7.48□□□□□ -1.21
SYCP1-209ENST00000613524 PLCH2O75038 1416 aa7.48□□□□□ -1.21
SYCP1-209ENST00000613524 MAP3K4Q9Y6R4 1608 aa7.47□□□□□ -1.21
SYCP1-209ENST00000613524 SYCP2Q9BX26 1530 aa7.47□□□□□ -1.21
SYCP1-209ENST00000613524 LRRC9Q6ZRR7 1453 aa7.47□□□□□ -1.21
SYCP1-209ENST00000613524 GPATCH8Q9UKJ3 1502 aaKnown RBP7.46□□□□□ -1.21
SYCP1-209ENST00000613524 TIAM1Q13009 1591 aa7.46□□□□□ -1.22
SYCP1-209ENST00000613524 PCGF6Q9BYE7 350 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 ABCA9Q8IUA7 1624 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 CFAP43Q8NDM7 1665 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 ARHGEF12Q9NZN5 1544 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 GTPBP6O43824 516 aaPredicted RBP7.45□□□□□ -1.22
SYCP1-209ENST00000613524 MYO5CQ9NQX4 1742 aa7.44□□□□□ -1.22
SYCP1-209ENST00000613524 GLI2P10070 1586 aa7.44□□□□□ -1.22
SYCP1-209ENST00000613524 TRIM52Q96A61 297 aa7.44□□□□□ -1.22
SYCP1-209ENST00000613524 CDC42BPBQ9Y5S2 1711 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 NUTM2DQ5VT03 806 aaPredicted RBP7.42□□□□□ -1.22
SYCP1-209ENST00000613524 FBXO31Q5XUX0 539 aaPredicted RBP7.42□□□□□ -1.22
SYCP1-209ENST00000613524 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 EHBP1L1Q8N3D4 1523 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 CDC42BPAQ5VT25 1732 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 CFAP65Q6ZU64 1925 aaKnown RBP7.41□□□□□ -1.22
SYCP1-209ENST00000613524 CAMSAP2Q08AD1 1489 aa7.41□□□□□ -1.22
SYCP1-209ENST00000613524 NEO1Q92859 1461 aa7.41□□□□□ -1.22
SYCP1-209ENST00000613524 SUPT6HQ7KZ85 1726 aaKnown RBP7.41□□□□□ -1.22
SYCP1-209ENST00000613524 KCNV2Q8TDN2 545 aa7.41□□□□□ -1.22
SYCP1-209ENST00000613524 SAMD9LQ8IVG5 1584 aa7.4□□□□□ -1.22
SYCP1-209ENST00000613524 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 CADPS2Q86UW7 1296 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 ZNF518AQ6AHZ1 1483 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 MYOM3Q5VTT5 1437 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 ZFYVE16Q7Z3T8 1539 aa7.39□□□□□ -1.23
SYCP1-209ENST00000613524 STAG3Q9UJ98 1225 aa7.39□□□□□ -1.23
SYCP1-209ENST00000613524 NEUROD2Q15784 382 aa7.39□□□□□ -1.23
SYCP1-209ENST00000613524 HS6ST3Q8IZP7 471 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 PREX2Q70Z35 1606 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 FGD6Q6ZV73 1430 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 STK25O00506 426 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 FRMPD1Q5SYB0 1578 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 ARAP3Q8WWN8 1544 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 CAPN15O75808 1086 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 SLC24A3Q9HC58 644 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 KIF15Q9NS87 1388 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 ABCC1P33527 1531 aa7.36□□□□□ -1.23
SYCP1-209ENST00000613524 C9orf84Q5VXU9 1444 aa7.36□□□□□ -1.23
SYCP1-209ENST00000613524 ATP10AO60312 1499 aa7.36□□□□□ -1.23
SYCP1-209ENST00000613524 RBM33Q96EV2 1170 aaKnown RBP7.35□□□□□ -1.23
SYCP1-209ENST00000613524 RICTORQ6R327 1708 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 CCDC141Q6ZP82 1450 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 MADDQ8WXG6 1647 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 SIGLEC1Q9BZZ2 1709 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 PLEKHH2Q8IVE3 1493 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 RIMS1Q86UR5 1692 aaKnown RBP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 ZNF692Q9BU19 519 aaPredicted RBP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 GPBP1L1Q9HC44 474 aaPredicted RBP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 PTPN23Q9H3S7 1636 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 C1orf115Q9H7X2 142 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 A2MP01023 1474 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 ABCC5O15440 1437 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 HECW2Q9P2P5 1572 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 ABCA6Q8N139 1617 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 MBD5Q9P267 1494 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 PTPRKQ15262 1439 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 PTPRMP28827 1452 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 DAPK1P53355 1430 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ITSN2Q9NZM3 1697 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 RGL3Q3MIN7 710 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 NCKAP5LQ9HCH0 1330 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ANKRD30AQ9BXX3 1397 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ARHGEF40Q8TER5 1519 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
SYCP1-209ENST00000613524 DIP2CQ9Y2E4 1556 aa7.31□□□□□ -1.24
SYCP1-209ENST00000613524 KIDINS220Q9ULH0 1771 aa7.31□□□□□ -1.24
SYCP1-209ENST00000613524 ZNF326Q5BKZ1 582 aaKnown RBP7.31□□□□□ -1.24
SYCP1-209ENST00000613524 NUP155O75694 1391 aa7.3□□□□□ -1.24
SYCP1-209ENST00000613524 DHX29Q7Z478 1369 aaKnown RBP7.3□□□□□ -1.24
SYCP1-209ENST00000613524 RSPH4AQ5TD94 716 aa7.3□□□□□ -1.24
SYCP1-209ENST00000613524 KIAA1107Q9UPP5 1409 aa7.29□□□□□ -1.24
SYCP1-209ENST00000613524 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
SYCP1-209ENST00000613524 PLEKHG5O94827 1062 aa7.29□□□□□ -1.24
SYCP1-209ENST00000613524 SEMA3EO15041 775 aa7.29□□□□□ -1.24
SYCP1-209ENST00000613524 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
SYCP1-209ENST00000613524 MLH3Q9UHC1 1453 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 MIA2Q96PC5 1412 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 ANKRD50Q9ULJ7 1429 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.28□□□□□ -1.24
SYCP1-209ENST00000613524 NPM2Q86SE8 214 aaKnown RBP7.27□□□□□ -1.24
SYCP1-209ENST00000613524 FER1L4A9Z1Z3 1794 aa7.27□□□□□ -1.25
SYCP1-209ENST00000613524 NEUROD1Q13562 356 aa7.27□□□□□ -1.25
SYCP1-209ENST00000613524 KANK1Q14678 1352 aa7.27□□□□□ -1.25
SYCP1-209ENST00000613524 MAGI2Q86UL8 1455 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms