RNA–Protein interactions for RNA: ENST00000612655.4

POLR2E-211, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 3 BASIC

Gene POLR2E, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-211ENST00000612655 MBD5Q9P267 1494 aa20.6■□□□□ 0.89
POLR2E-211ENST00000612655 ARHGEF12Q9NZN5 1544 aa20.59■□□□□ 0.89
POLR2E-211ENST00000612655 KDM5CP41229 1560 aa20.59■□□□□ 0.89
POLR2E-211ENST00000612655 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
POLR2E-211ENST00000612655 POGZQ7Z3K3 1410 aa20.58■□□□□ 0.89
POLR2E-211ENST00000612655 CCDC141Q6ZP82 1450 aa20.57■□□□□ 0.88
POLR2E-211ENST00000612655 PKD2Q13563 968 aa20.57■□□□□ 0.88
POLR2E-211ENST00000612655 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
POLR2E-211ENST00000612655 ZMYM4Q5VZL5 1548 aa20.56■□□□□ 0.88
POLR2E-211ENST00000612655 ERICH6BQ5W0A0 696 aa20.56■□□□□ 0.88
POLR2E-211ENST00000612655 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
POLR2E-211ENST00000612655 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
POLR2E-211ENST00000612655 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
POLR2E-211ENST00000612655 INO80Q9ULG1 1556 aaPredicted RBP20.54■□□□□ 0.88
POLR2E-211ENST00000612655 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
POLR2E-211ENST00000612655 UHRF1BP1Q6BDS2 1440 aa20.53■□□□□ 0.88
POLR2E-211ENST00000612655 NUP155O75694 1391 aa20.53■□□□□ 0.88
POLR2E-211ENST00000612655 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
POLR2E-211ENST00000612655 HECW2Q9P2P5 1572 aa20.52■□□□□ 0.88
POLR2E-211ENST00000612655 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.88
POLR2E-211ENST00000612655 BCANQ96GW7 911 aa20.52■□□□□ 0.88
POLR2E-211ENST00000612655 ZFYVE16Q7Z3T8 1539 aa20.52■□□□□ 0.87
POLR2E-211ENST00000612655 KIF15Q9NS87 1388 aa20.51■□□□□ 0.87
POLR2E-211ENST00000612655 TRAPPC8Q9Y2L5 1435 aa20.5■□□□□ 0.87
POLR2E-211ENST00000612655 PLXNC1O60486 1568 aa20.49■□□□□ 0.87
POLR2E-211ENST00000612655 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
POLR2E-211ENST00000612655 COL17A1Q9UMD9 1497 aaPredicted RBP20.48■□□□□ 0.87
POLR2E-211ENST00000612655 ATP7AQ04656 1500 aa20.47■□□□□ 0.87
POLR2E-211ENST00000612655 HNRNPMP52272 730 aaKnown RBP eCLIP20.47■□□□□ 0.87
POLR2E-211ENST00000612655 RALGAPBQ86X10 1494 aa20.46■□□□□ 0.87
POLR2E-211ENST00000612655 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
POLR2E-211ENST00000612655 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
POLR2E-211ENST00000612655 ARHGEF40Q8TER5 1519 aa20.44■□□□□ 0.86
POLR2E-211ENST00000612655 USP47Q96K76 1375 aa20.44■□□□□ 0.86
POLR2E-211ENST00000612655 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
POLR2E-211ENST00000612655 RTEL1-TNFRSF6BF6WH68 1400 aa20.43■□□□□ 0.86
POLR2E-211ENST00000612655 ABCA6Q8N139 1617 aa20.43■□□□□ 0.86
POLR2E-211ENST00000612655 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
POLR2E-211ENST00000612655 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
POLR2E-211ENST00000612655 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
POLR2E-211ENST00000612655 FAM135AQ9P2D6 1515 aa20.4■□□□□ 0.86
POLR2E-211ENST00000612655 UNC13BO14795 1591 aa20.4■□□□□ 0.86
POLR2E-211ENST00000612655 DIP2CQ9Y2E4 1556 aa20.4■□□□□ 0.86
POLR2E-211ENST00000612655 MRS2Q9HD23 443 aa20.39■□□□□ 0.85
POLR2E-211ENST00000612655 REREQ9P2R6 1566 aa20.37■□□□□ 0.85
POLR2E-211ENST00000612655 RAPGEF3O95398 923 aa20.37■□□□□ 0.85
POLR2E-211ENST00000612655 AFAP1Q8N556 730 aa20.37■□□□□ 0.85
POLR2E-211ENST00000612655 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
POLR2E-211ENST00000612655 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
POLR2E-211ENST00000612655 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
POLR2E-211ENST00000612655 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
POLR2E-211ENST00000612655 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
POLR2E-211ENST00000612655 DUOX2Q9NRD8 1548 aa20.33■□□□□ 0.85
POLR2E-211ENST00000612655 EIF2AK4Q9P2K8 1649 aaKnown RBP20.33■□□□□ 0.84
POLR2E-211ENST00000612655 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.84
POLR2E-211ENST00000612655 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.84
POLR2E-211ENST00000612655 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
POLR2E-211ENST00000612655 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
POLR2E-211ENST00000612655 PPP4R2Q9NY27 417 aa20.31■□□□□ 0.84
POLR2E-211ENST00000612655 YEATS2Q9ULM3 1422 aa20.31■□□□□ 0.84
POLR2E-211ENST00000612655 CCDC144AA2RUR9 1427 aa20.3■□□□□ 0.84
POLR2E-211ENST00000612655 ERBINQ96RT1 1412 aa20.3■□□□□ 0.84
POLR2E-211ENST00000612655 DCAF11Q8TEB1 546 aa20.28■□□□□ 0.84
POLR2E-211ENST00000612655 KTN1Q86UP2 1357 aaKnown RBP20.27■□□□□ 0.84
POLR2E-211ENST00000612655 A2MP01023 1474 aa20.27■□□□□ 0.83
POLR2E-211ENST00000612655 ATP10AO60312 1499 aa20.26■□□□□ 0.83
POLR2E-211ENST00000612655 SIGLEC1Q9BZZ2 1709 aa20.25■□□□□ 0.83
POLR2E-211ENST00000612655 LAMC1P11047 1609 aa20.25■□□□□ 0.83
POLR2E-211ENST00000612655 AGLP35573 1532 aa20.24■□□□□ 0.83
POLR2E-211ENST00000612655 DEPDC5O75140 1603 aa20.24■□□□□ 0.83
POLR2E-211ENST00000612655 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
POLR2E-211ENST00000612655 RNF17Q9BXT8 1623 aaKnown RBP20.24■□□□□ 0.83
POLR2E-211ENST00000612655 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
POLR2E-211ENST00000612655 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
POLR2E-211ENST00000612655 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
POLR2E-211ENST00000612655 GPRASP1Q5JY77 1395 aa20.2■□□□□ 0.83
POLR2E-211ENST00000612655 PLA2R1Q13018 1463 aa20.2■□□□□ 0.82
POLR2E-211ENST00000612655 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
POLR2E-211ENST00000612655 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
POLR2E-211ENST00000612655 POLR3GLQ9BT43 218 aa20.19■□□□□ 0.82
POLR2E-211ENST00000612655 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
POLR2E-211ENST00000612655 PRDM15P57071 1507 aaPredicted RBP20.18■□□□□ 0.82
POLR2E-211ENST00000612655 E9PCH4 1651 aa20.18■□□□□ 0.82
POLR2E-211ENST00000612655 RALBP1Q15311 655 aa20.18■□□□□ 0.82
POLR2E-211ENST00000612655 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
POLR2E-211ENST00000612655 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
POLR2E-211ENST00000612655 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
POLR2E-211ENST00000612655 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
POLR2E-211ENST00000612655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.821e-12■□□□□ 9.3
POLR2E-211ENST00000612655 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
POLR2E-211ENST00000612655 ZC3H13Q5T200 1668 aaKnown RBP20.14■□□□□ 0.81
POLR2E-211ENST00000612655 BRD4O60885 1362 aaPredicted RBP20.14■□□□□ 0.81
POLR2E-211ENST00000612655 STAC3Q96MF2 364 aa20.12■□□□□ 0.81
POLR2E-211ENST00000612655 MYBBP1AQ9BQG0 1328 aaKnown RBP20.11■□□□□ 0.81
POLR2E-211ENST00000612655 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
POLR2E-211ENST00000612655 VWDEQ8N2E2 1590 aa20.11■□□□□ 0.81
POLR2E-211ENST00000612655 LRPPRCP42704 1394 aaKnown RBP20.11■□□□□ 0.81
POLR2E-211ENST00000612655 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
POLR2E-211ENST00000612655 RGL3Q3MIN7 710 aa20.08■□□□□ 0.81
POLR2E-211ENST00000612655 CEP152O94986 1710 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms