RNA–Protein interactions for RNA: ENST00000612655.4

POLR2E-211, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 3 BASIC

Gene POLR2E, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-211ENST00000612655 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
POLR2E-211ENST00000612655 CCDC180Q9P1Z9 1646 aa28.35■■■□□ 2.13
POLR2E-211ENST00000612655 ABCC9O60706 1549 aa27.03■■□□□ 1.92
POLR2E-211ENST00000612655 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
POLR2E-211ENST00000612655 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
POLR2E-211ENST00000612655 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
POLR2E-211ENST00000612655 NACADO15069 1562 aa26.45■■□□□ 1.82
POLR2E-211ENST00000612655 RB1CC1Q8TDY2 1594 aa26.35■■□□□ 1.81
POLR2E-211ENST00000612655 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
POLR2E-211ENST00000612655 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
POLR2E-211ENST00000612655 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
POLR2E-211ENST00000612655 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
POLR2E-211ENST00000612655 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
POLR2E-211ENST00000612655 BICRAQ9NZM4 1560 aa25.53■■□□□ 1.68
POLR2E-211ENST00000612655 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.63
POLR2E-211ENST00000612655 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
POLR2E-211ENST00000612655 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
POLR2E-211ENST00000612655 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
POLR2E-211ENST00000612655 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
POLR2E-211ENST00000612655 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
POLR2E-211ENST00000612655 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
POLR2E-211ENST00000612655 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
POLR2E-211ENST00000612655 MROH2BQ7Z745 1585 aa24.61■■□□□ 1.53
POLR2E-211ENST00000612655 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
POLR2E-211ENST00000612655 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
POLR2E-211ENST00000612655 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
POLR2E-211ENST00000612655 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
POLR2E-211ENST00000612655 WIZO95785 1651 aa24.4■■□□□ 1.5
POLR2E-211ENST00000612655 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
POLR2E-211ENST00000612655 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
POLR2E-211ENST00000612655 HRCP23327 699 aa24.3■■□□□ 1.48
POLR2E-211ENST00000612655 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
POLR2E-211ENST00000612655 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
POLR2E-211ENST00000612655 LOC105371045A0A1W2PR82 267 aa24.13■■□□□ 1.45
POLR2E-211ENST00000612655 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
POLR2E-211ENST00000612655 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
POLR2E-211ENST00000612655 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
POLR2E-211ENST00000612655 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
POLR2E-211ENST00000612655 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
POLR2E-211ENST00000612655 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
POLR2E-211ENST00000612655 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
POLR2E-211ENST00000612655 CFTRP13569 1480 aa23.62■■□□□ 1.37
POLR2E-211ENST00000612655 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
POLR2E-211ENST00000612655 NESP48681 1621 aa23.55■■□□□ 1.36
POLR2E-211ENST00000612655 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
POLR2E-211ENST00000612655 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
POLR2E-211ENST00000612655 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
POLR2E-211ENST00000612655 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
POLR2E-211ENST00000612655 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
POLR2E-211ENST00000612655 EEA1Q15075 1411 aa23.37■■□□□ 1.33
POLR2E-211ENST00000612655 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
POLR2E-211ENST00000612655 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
POLR2E-211ENST00000612655 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
POLR2E-211ENST00000612655 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
POLR2E-211ENST00000612655 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
POLR2E-211ENST00000612655 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
POLR2E-211ENST00000612655 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
POLR2E-211ENST00000612655 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
POLR2E-211ENST00000612655 SOGA1O94964 1423 aa23.16■■□□□ 1.3
POLR2E-211ENST00000612655 WDR62O43379 1518 aa23.15■■□□□ 1.3
POLR2E-211ENST00000612655 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.3
POLR2E-211ENST00000612655 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
POLR2E-211ENST00000612655 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
POLR2E-211ENST00000612655 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
POLR2E-211ENST00000612655 CUX1P39880 1505 aa23.08■■□□□ 1.29
POLR2E-211ENST00000612655 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
POLR2E-211ENST00000612655 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
POLR2E-211ENST00000612655 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
POLR2E-211ENST00000612655 CEP162Q5TB80 1403 aa23.06■■□□□ 1.28
POLR2E-211ENST00000612655 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
POLR2E-211ENST00000612655 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
POLR2E-211ENST00000612655 KIF21BO75037 1637 aa22.98■■□□□ 1.27
POLR2E-211ENST00000612655 CUX2O14529 1486 aa22.96■■□□□ 1.27
POLR2E-211ENST00000612655 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
POLR2E-211ENST00000612655 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
POLR2E-211ENST00000612655 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
POLR2E-211ENST00000612655 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
POLR2E-211ENST00000612655 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
POLR2E-211ENST00000612655 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
POLR2E-211ENST00000612655 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
POLR2E-211ENST00000612655 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
POLR2E-211ENST00000612655 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
POLR2E-211ENST00000612655 CLIP1P30622 1438 aa22.7■■□□□ 1.22
POLR2E-211ENST00000612655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
POLR2E-211ENST00000612655 ABCA5Q8WWZ7 1642 aa22.69■■□□□ 1.22
POLR2E-211ENST00000612655 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
POLR2E-211ENST00000612655 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
POLR2E-211ENST00000612655 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
POLR2E-211ENST00000612655 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
POLR2E-211ENST00000612655 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
POLR2E-211ENST00000612655 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
POLR2E-211ENST00000612655 PRXQ9BXM0 1461 aa22.59■■□□□ 1.21
POLR2E-211ENST00000612655 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
POLR2E-211ENST00000612655 GAPVD1Q14C86 1478 aa22.53■■□□□ 1.2
POLR2E-211ENST00000612655 APLP2Q06481 763 aa22.51■■□□□ 1.19
POLR2E-211ENST00000612655 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
POLR2E-211ENST00000612655 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.192e-7■■■■□ 26
POLR2E-211ENST00000612655 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
POLR2E-211ENST00000612655 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
POLR2E-211ENST00000612655 CUL7Q14999 1698 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms