RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KDM5DQ9BY66 1539 aa27.86■■■□□ 2.05
SEMA3B-211ENST00000612509 ERBINQ96RT1 1412 aa27.84■■■□□ 2.05
SEMA3B-211ENST00000612509 PPP6R1Q9UPN7 881 aa27.83■■■□□ 2.05
SEMA3B-211ENST00000612509 ANKRD30AQ9BXX3 1397 aa27.83■■■□□ 2.05
SEMA3B-211ENST00000612509 MROH1Q8NDA8 1641 aa27.82■■■□□ 2.04
SEMA3B-211ENST00000612509 ZMYM3Q14202 1370 aa27.8■■■□□ 2.04
SEMA3B-211ENST00000612509 ZC3H13Q5T200 1668 aaKnown RBP27.79■■■□□ 2.04
SEMA3B-211ENST00000612509 NCOA1Q15788 1441 aa27.79■■■□□ 2.04
SEMA3B-211ENST00000612509 CHIC2Q9UKJ5 165 aa27.79■■■□□ 2.04
SEMA3B-211ENST00000612509 RRP7BPQ9NSQ0 103 aa27.78■■■□□ 2.04
SEMA3B-211ENST00000612509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.77■■■□□ 2.04
SEMA3B-211ENST00000612509 PRDM15P57071 1507 aaPredicted RBP27.77■■■□□ 2.04
SEMA3B-211ENST00000612509 NPATQ14207 1427 aa27.76■■■□□ 2.04
SEMA3B-211ENST00000612509 PTPRKQ15262 1439 aa27.76■■■□□ 2.04
SEMA3B-211ENST00000612509 RRBP1Q9P2E9 1410 aaKnown RBP27.76■■■□□ 2.04
SEMA3B-211ENST00000612509 SETD1BQ9UPS6 1966 aaKnown RBP27.76■■■□□ 2.03
SEMA3B-211ENST00000612509 DEPDC5O75140 1603 aa27.75■■■□□ 2.03
SEMA3B-211ENST00000612509 UHRF1BP1Q6BDS2 1440 aa27.75■■■□□ 2.03
SEMA3B-211ENST00000612509 ABCC3O15438 1527 aa27.74■■■□□ 2.03
SEMA3B-211ENST00000612509 CEP152O94986 1710 aa27.72■■■□□ 2.03
SEMA3B-211ENST00000612509 MYO3AQ8NEV4 1616 aa27.7■■■□□ 2.03
SEMA3B-211ENST00000612509 PZPP20742 1482 aa27.7■■■□□ 2.03
SEMA3B-211ENST00000612509 WASHC2CQ9Y4E1 1318 aa27.69■■■□□ 2.02
SEMA3B-211ENST00000612509 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
SEMA3B-211ENST00000612509 ROCK1Q13464 1354 aa27.67■■■□□ 2.02
SEMA3B-211ENST00000612509 ZNF142P52746 1687 aaPredicted RBP27.65■■■□□ 2.02
SEMA3B-211ENST00000612509 HSPA2P54652 639 aa27.65■■■□□ 2.02
SEMA3B-211ENST00000612509 ANKRD50Q9ULJ7 1429 aa27.65■■■□□ 2.02
SEMA3B-211ENST00000612509 VWDEQ8N2E2 1590 aa27.61■■■□□ 2.01
SEMA3B-211ENST00000612509 ITGAEP38570 1179 aa27.61■■■□□ 2.01
SEMA3B-211ENST00000612509 CEP170BQ9Y4F5 1589 aaPredicted RBP27.6■■■□□ 2.01
SEMA3B-211ENST00000612509 LMTK2Q8IWU2 1503 aa27.57■■■□□ 2
SEMA3B-211ENST00000612509 UNC13BO14795 1591 aa27.57■■■□□ 2
SEMA3B-211ENST00000612509 SPATA31D1Q6ZQQ2 1576 aa27.57■■■□□ 2
SEMA3B-211ENST00000612509 KANK1Q14678 1352 aa27.57■■■□□ 2
SEMA3B-211ENST00000612509 TNRQ92752 1358 aa27.56■■■□□ 2
SEMA3B-211ENST00000612509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.55■■■□□ 23e-7■■■□□ 16.4
SEMA3B-211ENST00000612509 ERVK-7P63135 1459 aa27.55■■■□□ 2
SEMA3B-211ENST00000612509 FBXO31Q5XUX0 539 aaPredicted RBP27.54■■■□□ 2
SEMA3B-211ENST00000612509 ARHGAP31Q2M1Z3 1444 aa27.53■■■□□ 2
SEMA3B-211ENST00000612509 A2ML1A8K2U0 1454 aa27.52■■■□□ 2
SEMA3B-211ENST00000612509 STRCQ7RTU9 1775 aa27.52■■■□□ 2
SEMA3B-211ENST00000612509 EFCAB6Q5THR3 1501 aa27.51■■■□□ 2
SEMA3B-211ENST00000612509 GCC2Q8IWJ2 1684 aa27.51■■□□□ 1.99
SEMA3B-211ENST00000612509 NLRP1Q9C000 1473 aa27.48■■□□□ 1.99
SEMA3B-211ENST00000612509 TET3O43151 1660 aa27.46■■□□□ 1.99
SEMA3B-211ENST00000612509 CFAP65Q6ZU64 1925 aaKnown RBP27.46■■□□□ 1.99
SEMA3B-211ENST00000612509 IQGAP3Q86VI3 1631 aa27.45■■□□□ 1.98
SEMA3B-211ENST00000612509 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
SEMA3B-211ENST00000612509 NAIPQ13075 1403 aa27.41■■□□□ 1.98
SEMA3B-211ENST00000612509 UGGT1Q9NYU2 1555 aa27.39■■□□□ 1.98
SEMA3B-211ENST00000612509 HFM1A2PYH4 1435 aa27.39■■□□□ 1.97
SEMA3B-211ENST00000612509 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
SEMA3B-211ENST00000612509 SYNMO15061 1565 aa27.36■■□□□ 1.97
SEMA3B-211ENST00000612509 POLR1AO95602 1720 aaPredicted RBP27.35■■□□□ 1.97
SEMA3B-211ENST00000612509 UBR1Q8IWV7 1749 aa27.35■■□□□ 1.97
SEMA3B-211ENST00000612509 NOS1P29475 1434 aa27.34■■□□□ 1.97
SEMA3B-211ENST00000612509 E9PCH4 1651 aa27.34■■□□□ 1.97
SEMA3B-211ENST00000612509 PTPRTO14522 1441 aa27.33■■□□□ 1.97
SEMA3B-211ENST00000612509 NUP155O75694 1391 aa27.33■■□□□ 1.97
SEMA3B-211ENST00000612509 PIK3C2BO00750 1634 aa27.32■■□□□ 1.96
SEMA3B-211ENST00000612509 DMRT2Q9Y5R5 561 aa27.3■■□□□ 1.96
SEMA3B-211ENST00000612509 NEURL4Q96JN8 1562 aa27.28■■□□□ 1.96
SEMA3B-211ENST00000612509 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
SEMA3B-211ENST00000612509 NCKAP5LQ9HCH0 1330 aa27.27■■□□□ 1.96
SEMA3B-211ENST00000612509 PKD2Q13563 968 aa27.27■■□□□ 1.96
SEMA3B-211ENST00000612509 THEMISQ8N1K5 641 aaPredicted RBP27.25■■□□□ 1.95
SEMA3B-211ENST00000612509 ADGRB3O60242 1522 aa27.24■■□□□ 1.95
SEMA3B-211ENST00000612509 SLIT1O75093 1534 aa27.21■■□□□ 1.95
SEMA3B-211ENST00000612509 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
SEMA3B-211ENST00000612509 SPHKAPQ2M3C7 1700 aa27.19■■□□□ 1.94
SEMA3B-211ENST00000612509 ILDR1Q86SU0 546 aaPredicted RBP27.18■■□□□ 1.94
SEMA3B-211ENST00000612509 IDI1Q13907 227 aa27.17■■□□□ 1.94
SEMA3B-211ENST00000612509 ANKLE2Q86XL3 938 aa27.16■■□□□ 1.94
SEMA3B-211ENST00000612509 SLC52A1Q9NWF4 448 aa27.16■■□□□ 1.94
SEMA3B-211ENST00000612509 MED14O60244 1454 aa27.16■■□□□ 1.94
SEMA3B-211ENST00000612509 IQGAP1P46940 1657 aa27.16■■□□□ 1.94
SEMA3B-211ENST00000612509 SCAF11Q99590 1463 aaKnown RBP27.14■■□□□ 1.94
SEMA3B-211ENST00000612509 NPHP4O75161 1426 aaPredicted RBP27.14■■□□□ 1.93
SEMA3B-211ENST00000612509 MYO5BQ9ULV0 1848 aa27.13■■□□□ 1.93
SEMA3B-211ENST00000612509 STAG3Q9UJ98 1225 aa27.13■■□□□ 1.93
SEMA3B-211ENST00000612509 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
SEMA3B-211ENST00000612509 LTBP4Q8N2S1 1624 aa27.12■■□□□ 1.93
SEMA3B-211ENST00000612509 TMEM2Q9UHN6 1383 aa27.11■■□□□ 1.93
SEMA3B-211ENST00000612509 TRIM52Q96A61 297 aa27.11■■□□□ 1.93
SEMA3B-211ENST00000612509 TRPM2O94759 1503 aa27.09■■□□□ 1.93
SEMA3B-211ENST00000612509 SETD5Q9C0A6 1442 aa27.07■■□□□ 1.92
SEMA3B-211ENST00000612509 CLTCL1P53675 1640 aa27.05■■□□□ 1.92
SEMA3B-211ENST00000612509 ZNF335Q9H4Z2 1342 aaPredicted RBP27.04■■□□□ 1.92
SEMA3B-211ENST00000612509 LTKP29376 864 aa27.03■■□□□ 1.92
SEMA3B-211ENST00000612509 ZFYVE9O95405 1425 aa27.02■■□□□ 1.92
SEMA3B-211ENST00000612509 TXNDC2Q86VQ3 553 aa27.02■■□□□ 1.92
SEMA3B-211ENST00000612509 CERKQ8TCT0 537 aa27.02■■□□□ 1.92
SEMA3B-211ENST00000612509 SLC4A1APQ9BWU0 796 aaKnown RBP27.02■■□□□ 1.92
SEMA3B-211ENST00000612509 EID1Q9Y6B2 187 aa27.02■■□□□ 1.92
SEMA3B-211ENST00000612509 RAB3GAP2Q9H2M9 1393 aa27■■□□□ 1.91
SEMA3B-211ENST00000612509 RIMS2Q9UQ26 1411 aa26.98■■□□□ 1.91
SEMA3B-211ENST00000612509 CHGAP10645 457 aaKnown RBP26.97■■□□□ 1.91
SEMA3B-211ENST00000612509 ACIN1Q9UKV3 1341 aaKnown RBP26.95■■□□□ 1.91
SEMA3B-211ENST00000612509 IQSEC2Q5JU85 1478 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms