RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 FBXO31Q5XUX0 539 aaPredicted RBP16.99■□□□□ 0.31
SSX3-204ENST00000612497 RGS17Q9UGC6 210 aaPredicted RBP16.99■□□□□ 0.31
SSX3-204ENST00000612497 GPATCH8Q9UKJ3 1502 aaKnown RBP16.99■□□□□ 0.31
SSX3-204ENST00000612497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.99■□□□□ 0.31
SSX3-204ENST00000612497 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
SSX3-204ENST00000612497 CASKIN1Q8WXD9 1431 aa16.97■□□□□ 0.31
SSX3-204ENST00000612497 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
SSX3-204ENST00000612497 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
SSX3-204ENST00000612497 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
SSX3-204ENST00000612497 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
SSX3-204ENST00000612497 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.31
SSX3-204ENST00000612497 MED14O60244 1454 aa16.93■□□□□ 0.3
SSX3-204ENST00000612497 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
SSX3-204ENST00000612497 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
SSX3-204ENST00000612497 STRCP1A6NGW2 1772 aa16.92■□□□□ 0.3
SSX3-204ENST00000612497 LRRC7Q96NW7 1537 aa16.92■□□□□ 0.3
SSX3-204ENST00000612497 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
SSX3-204ENST00000612497 PZPP20742 1482 aa16.92■□□□□ 0.3
SSX3-204ENST00000612497 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
SSX3-204ENST00000612497 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
SSX3-204ENST00000612497 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
SSX3-204ENST00000612497 KIF3BO15066 747 aa16.9■□□□□ 0.3
SSX3-204ENST00000612497 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
SSX3-204ENST00000612497 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
SSX3-204ENST00000612497 MIA2Q96PC5 1412 aa16.88■□□□□ 0.29
SSX3-204ENST00000612497 KDM5DQ9BY66 1539 aa16.88■□□□□ 0.29
SSX3-204ENST00000612497 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
SSX3-204ENST00000612497 SYNMO15061 1565 aa16.88■□□□□ 0.29
SSX3-204ENST00000612497 DHX29Q7Z478 1369 aaKnown RBP16.88■□□□□ 0.29
SSX3-204ENST00000612497 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
SSX3-204ENST00000612497 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
SSX3-204ENST00000612497 RTEL1-TNFRSF6BF6WH68 1400 aa16.84■□□□□ 0.29
SSX3-204ENST00000612497 MBD5Q9P267 1494 aa16.81■□□□□ 0.28
SSX3-204ENST00000612497 SETD1AO15047 1707 aaKnown RBP16.8■□□□□ 0.28
SSX3-204ENST00000612497 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
SSX3-204ENST00000612497 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
SSX3-204ENST00000612497 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
SSX3-204ENST00000612497 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
SSX3-204ENST00000612497 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
SSX3-204ENST00000612497 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
SSX3-204ENST00000612497 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
SSX3-204ENST00000612497 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
SSX3-204ENST00000612497 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
SSX3-204ENST00000612497 UBR1Q8IWV7 1749 aa16.72■□□□□ 0.27
SSX3-204ENST00000612497 LTKP29376 864 aa16.71■□□□□ 0.27
SSX3-204ENST00000612497 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
SSX3-204ENST00000612497 ERVK-7P63135 1459 aa16.7■□□□□ 0.26
SSX3-204ENST00000612497 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
SSX3-204ENST00000612497 ABCC3O15438 1527 aa16.69■□□□□ 0.26
SSX3-204ENST00000612497 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
SSX3-204ENST00000612497 TMEM94Q12767 1356 aa16.67■□□□□ 0.26
SSX3-204ENST00000612497 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSX3-204ENST00000612497 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
SSX3-204ENST00000612497 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
SSX3-204ENST00000612497 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
SSX3-204ENST00000612497 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
SSX3-204ENST00000612497 CAMSAP2Q08AD1 1489 aa16.66■□□□□ 0.26
SSX3-204ENST00000612497 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
SSX3-204ENST00000612497 SLIT1O75093 1534 aa16.65■□□□□ 0.26
SSX3-204ENST00000612497 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
SSX3-204ENST00000612497 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
SSX3-204ENST00000612497 RBM33Q96EV2 1170 aaKnown RBP16.64■□□□□ 0.25
SSX3-204ENST00000612497 PHLPP1O60346 1717 aa16.63■□□□□ 0.25
SSX3-204ENST00000612497 CEP152O94986 1710 aa16.63■□□□□ 0.25
SSX3-204ENST00000612497 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
SSX3-204ENST00000612497 JCADQ9P266 1359 aa16.63■□□□□ 0.25
SSX3-204ENST00000612497 LRRC9Q6ZRR7 1453 aa16.62■□□□□ 0.25
SSX3-204ENST00000612497 KCNA6P17658 529 aa16.61■□□□□ 0.25
SSX3-204ENST00000612497 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
SSX3-204ENST00000612497 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
SSX3-204ENST00000612497 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
SSX3-204ENST00000612497 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
SSX3-204ENST00000612497 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
SSX3-204ENST00000612497 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
SSX3-204ENST00000612497 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
SSX3-204ENST00000612497 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
SSX3-204ENST00000612497 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
SSX3-204ENST00000612497 MSH6P52701 1360 aa16.57■□□□□ 0.24
SSX3-204ENST00000612497 TMEM2Q9UHN6 1383 aa16.57■□□□□ 0.24
SSX3-204ENST00000612497 MSH5O43196 834 aa16.56■□□□□ 0.24
SSX3-204ENST00000612497 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
SSX3-204ENST00000612497 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
SSX3-204ENST00000612497 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
SSX3-204ENST00000612497 LRP6O75581 1613 aa16.53■□□□□ 0.24
SSX3-204ENST00000612497 SPATA31A6Q5VVP1 1343 aa16.53■□□□□ 0.24
SSX3-204ENST00000612497 RXRBP28702 533 aa16.53■□□□□ 0.24
SSX3-204ENST00000612497 BCANQ96GW7 911 aa16.53■□□□□ 0.24
SSX3-204ENST00000612497 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
SSX3-204ENST00000612497 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.24
SSX3-204ENST00000612497 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
SSX3-204ENST00000612497 TET3O43151 1660 aa16.51■□□□□ 0.23
SSX3-204ENST00000612497 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
SSX3-204ENST00000612497 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
SSX3-204ENST00000612497 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
SSX3-204ENST00000612497 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
SSX3-204ENST00000612497 IDI1Q13907 227 aa16.48■□□□□ 0.23
SSX3-204ENST00000612497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
SSX3-204ENST00000612497 KDM5AP29375 1690 aaKnown RBP16.48■□□□□ 0.23
SSX3-204ENST00000612497 DUOX2Q9NRD8 1548 aa16.47■□□□□ 0.23
SSX3-204ENST00000612497 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms