RNA–Protein interactions for RNA: ENST00000611387.1

PACRG-210, Transcript of parkin coregulated, humanhuman

TSL 5 BASIC

Gene PACRG, Length 279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-210ENST00000611387 PLXNC1O60486 1568 aa8.47□□□□□ -1.05
PACRG-210ENST00000611387 POLR1AO95602 1720 aaPredicted RBP8.46□□□□□ -1.05
PACRG-210ENST00000611387 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.05
PACRG-210ENST00000611387 EHBP1L1Q8N3D4 1523 aa8.46□□□□□ -1.05
PACRG-210ENST00000611387 PKD2Q13563 968 aa8.46□□□□□ -1.06
PACRG-210ENST00000611387 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.06
PACRG-210ENST00000611387 CLTCQ00610 1675 aaKnown RBP8.46□□□□□ -1.06
PACRG-210ENST00000611387 VWDEQ8N2E2 1590 aa8.45□□□□□ -1.06
PACRG-210ENST00000611387 FAM50AQ14320 339 aaKnown RBP8.45□□□□□ -1.06
PACRG-210ENST00000611387 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
PACRG-210ENST00000611387 ZMYM3Q14202 1370 aa8.45□□□□□ -1.06
PACRG-210ENST00000611387 STRCP1A6NGW2 1772 aa8.45□□□□□ -1.06
PACRG-210ENST00000611387 CPS1P31327 1500 aa8.44□□□□□ -1.06
PACRG-210ENST00000611387 ITGAEP38570 1179 aa8.44□□□□□ -1.06
PACRG-210ENST00000611387 EFCAB2Q5VUJ9 269 aa8.44□□□□□ -1.06
PACRG-210ENST00000611387 CCER1Q8TC90 406 aaPredicted RBP8.44□□□□□ -1.06
PACRG-210ENST00000611387 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
PACRG-210ENST00000611387 ZEB1P37275 1124 aaPredicted RBP8.43□□□□□ -1.06
PACRG-210ENST00000611387 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
PACRG-210ENST00000611387 TROQ12816 1431 aaPredicted RBP8.43□□□□□ -1.06
PACRG-210ENST00000611387 PTPRKQ15262 1439 aa8.43□□□□□ -1.06
PACRG-210ENST00000611387 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
PACRG-210ENST00000611387 INO80Q9ULG1 1556 aaPredicted RBP8.43□□□□□ -1.06
PACRG-210ENST00000611387 CDC42BPAQ5VT25 1732 aa8.42□□□□□ -1.06
PACRG-210ENST00000611387 HRCP23327 699 aa8.4□□□□□ -1.06
PACRG-210ENST00000611387 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.07
PACRG-210ENST00000611387 LRRC7Q96NW7 1537 aa8.39□□□□□ -1.07
PACRG-210ENST00000611387 A2ML1A8K2U0 1454 aa8.39□□□□□ -1.07
PACRG-210ENST00000611387 RRBP1Q9P2E9 1410 aaKnown RBP8.39□□□□□ -1.07
PACRG-210ENST00000611387 TRIM52Q96A61 297 aa8.39□□□□□ -1.07
PACRG-210ENST00000611387 SYNMO15061 1565 aa8.39□□□□□ -1.07
PACRG-210ENST00000611387 NCOA2Q15596 1464 aa8.38□□□□□ -1.07
PACRG-210ENST00000611387 ATP7AQ04656 1500 aa8.38□□□□□ -1.07
PACRG-210ENST00000611387 SYCP2Q9BX26 1530 aa8.38□□□□□ -1.07
PACRG-210ENST00000611387 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
PACRG-210ENST00000611387 DEPDC5O75140 1603 aa8.36□□□□□ -1.07
PACRG-210ENST00000611387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.36□□□□□ -1.07
PACRG-210ENST00000611387 FBXO31Q5XUX0 539 aaPredicted RBP8.36□□□□□ -1.07
PACRG-210ENST00000611387 FGD6Q6ZV73 1430 aa8.36□□□□□ -1.07
PACRG-210ENST00000611387 ADGBQ8N7X0 1667 aa8.35□□□□□ -1.07
PACRG-210ENST00000611387 MED14O60244 1454 aa8.35□□□□□ -1.07
PACRG-210ENST00000611387 RNF216Q9NWF9 866 aaPredicted RBP8.35□□□□□ -1.07
PACRG-210ENST00000611387 IQGAP1P46940 1657 aa8.34□□□□□ -1.07
PACRG-210ENST00000611387 ZC3H13Q5T200 1668 aaKnown RBP8.34□□□□□ -1.07
PACRG-210ENST00000611387 A2MP01023 1474 aa8.34□□□□□ -1.07
PACRG-210ENST00000611387 PTPN23Q9H3S7 1636 aa8.34□□□□□ -1.07
PACRG-210ENST00000611387 GGT6Q6P531 493 aa8.34□□□□□ -1.07
PACRG-210ENST00000611387 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
PACRG-210ENST00000611387 XIRP1Q702N8 1843 aaKnown RBP8.33□□□□□ -1.08
PACRG-210ENST00000611387 FAM135AQ9P2D6 1515 aa8.33□□□□□ -1.08
PACRG-210ENST00000611387 RBM33Q96EV2 1170 aaKnown RBP8.32□□□□□ -1.08
PACRG-210ENST00000611387 ZNF777Q9ULD5 760 aaPredicted RBP8.32□□□□□ -1.08
PACRG-210ENST00000611387 LRP6O75581 1613 aa8.32□□□□□ -1.08
PACRG-210ENST00000611387 PZPP20742 1482 aa8.32□□□□□ -1.08
PACRG-210ENST00000611387 SETBP1Q9Y6X0 1596 aa8.31□□□□□ -1.08
PACRG-210ENST00000611387 MIA2Q96PC5 1412 aa8.31□□□□□ -1.08
PACRG-210ENST00000611387 CFDP1Q9UEE9 299 aaPredicted RBP8.31□□□□□ -1.08
PACRG-210ENST00000611387 KDM5DQ9BY66 1539 aa8.3□□□□□ -1.08
PACRG-210ENST00000611387 HOXD11P31277 338 aaPredicted RBP8.3□□□□□ -1.08
PACRG-210ENST00000611387 ANKLE2Q86XL3 938 aa8.3□□□□□ -1.08
PACRG-210ENST00000611387 SLC4A1APQ9BWU0 796 aaKnown RBP8.3□□□□□ -1.08
PACRG-210ENST00000611387 TNRQ92752 1358 aa8.3□□□□□ -1.08
PACRG-210ENST00000611387 KIAA1107Q9UPP5 1409 aa8.29□□□□□ -1.08
PACRG-210ENST00000611387 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
PACRG-210ENST00000611387 UGGT1Q9NYU2 1555 aa8.29□□□□□ -1.08
PACRG-210ENST00000611387 ROBO1Q9Y6N7 1651 aa8.29□□□□□ -1.08
PACRG-210ENST00000611387 EP400Q96L91 3159 aa8.29□□□□□ -1.08
PACRG-210ENST00000611387 SETD5Q9C0A6 1442 aa8.29□□□□□ -1.08
PACRG-210ENST00000611387 NLRP1Q9C000 1473 aa8.28□□□□□ -1.08
PACRG-210ENST00000611387 SPAG9O60271 1321 aaKnown RBP8.28□□□□□ -1.08
PACRG-210ENST00000611387 HNRNPMP52272 730 aaKnown RBP eCLIP8.27□□□□□ -1.09
PACRG-210ENST00000611387 FAM135BQ49AJ0 1406 aa8.27□□□□□ -1.09
PACRG-210ENST00000611387 PLEKHH2Q8IVE3 1493 aa8.26□□□□□ -1.09
PACRG-210ENST00000611387 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
PACRG-210ENST00000611387 CAMSAP2Q08AD1 1489 aa8.26□□□□□ -1.09
PACRG-210ENST00000611387 MBD5Q9P267 1494 aa8.26□□□□□ -1.09
PACRG-210ENST00000611387 RAB3GAP2Q9H2M9 1393 aa8.25□□□□□ -1.09
PACRG-210ENST00000611387 UBR1Q8IWV7 1749 aa8.25□□□□□ -1.09
PACRG-210ENST00000611387 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
PACRG-210ENST00000611387 TMEM94Q12767 1356 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 RTEL1-TNFRSF6BF6WH68 1400 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 RGS12O14924 1447 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 TSPY4P0CV99 314 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 TSPY10P0CW01 314 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 RRP7BPQ9NSQ0 103 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 PHLPP1O60346 1717 aa8.23□□□□□ -1.09
PACRG-210ENST00000611387 DAPK1P53355 1430 aa8.22□□□□□ -1.09
PACRG-210ENST00000611387 ARHGAP23Q9P227 1491 aa8.22□□□□□ -1.09
PACRG-210ENST00000611387 RXRBP28702 533 aa8.22□□□□□ -1.09
PACRG-210ENST00000611387 LTKP29376 864 aa8.22□□□□□ -1.09
PACRG-210ENST00000611387 THEMISQ8N1K5 641 aaPredicted RBP8.22□□□□□ -1.09
PACRG-210ENST00000611387 DHX29Q7Z478 1369 aaKnown RBP8.22□□□□□ -1.09
PACRG-210ENST00000611387 JCADQ9P266 1359 aa8.22□□□□□ -1.09
PACRG-210ENST00000611387 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.09
PACRG-210ENST00000611387 SLIT1O75093 1534 aa8.21□□□□□ -1.1
PACRG-210ENST00000611387 MEX3CQ5U5Q3 659 aaKnown RBP8.21□□□□□ -1.1
PACRG-210ENST00000611387 ZNF644Q9H582 1327 aaPredicted RBP8.21□□□□□ -1.1
PACRG-210ENST00000611387 CLSPNQ9HAW4 1339 aa8.21□□□□□ -1.1
PACRG-210ENST00000611387 COL16A1Q07092 1604 aaPredicted RBP8.21□□□□□ -1.1
PACRG-210ENST00000611387 MROH1Q8NDA8 1641 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms