RNA–Protein interactions for RNA: ENST00000611327.1

SDR42E1P1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1, humanhuman

BASIC

Gene SDR42E1P1, Length 477 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P1-201ENST00000611327 PKD2Q13563 968 aa9.56□□□□□ -0.88
SDR42E1P1-201ENST00000611327 C3P01024 1663 aa9.53□□□□□ -0.88
SDR42E1P1-201ENST00000611327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.52□□□□□ -0.88
SDR42E1P1-201ENST00000611327 CTTNBP2Q8WZ74 1663 aa9.52□□□□□ -0.89
SDR42E1P1-201ENST00000611327 POTEAQ6S8J7 498 aa9.52□□□□□ -0.89
SDR42E1P1-201ENST00000611327 RAPGEF6Q8TEU7 1601 aa9.51□□□□□ -0.89
SDR42E1P1-201ENST00000611327 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
SDR42E1P1-201ENST00000611327 NPATQ14207 1427 aa9.5□□□□□ -0.89
SDR42E1P1-201ENST00000611327 PTPRKQ15262 1439 aa9.5□□□□□ -0.89
SDR42E1P1-201ENST00000611327 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
SDR42E1P1-201ENST00000611327 PLA2R1Q13018 1463 aa9.5□□□□□ -0.89
SDR42E1P1-201ENST00000611327 CNTLNQ9NXG0 1405 aa9.49□□□□□ -0.89
SDR42E1P1-201ENST00000611327 CPS1P31327 1500 aa9.49□□□□□ -0.89
SDR42E1P1-201ENST00000611327 PLCH2O75038 1416 aa9.48□□□□□ -0.89
SDR42E1P1-201ENST00000611327 TCOF1Q13428 1488 aaKnown RBP9.48□□□□□ -0.89
SDR42E1P1-201ENST00000611327 EFCAB2Q5VUJ9 269 aa9.48□□□□□ -0.89
SDR42E1P1-201ENST00000611327 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
SDR42E1P1-201ENST00000611327 ZNF518AQ6AHZ1 1483 aa9.47□□□□□ -0.89
SDR42E1P1-201ENST00000611327 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
SDR42E1P1-201ENST00000611327 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
SDR42E1P1-201ENST00000611327 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
SDR42E1P1-201ENST00000611327 ZMYM3Q14202 1370 aa9.46□□□□□ -0.9
SDR42E1P1-201ENST00000611327 AGLP35573 1532 aa9.45□□□□□ -0.9
SDR42E1P1-201ENST00000611327 DIP2CQ9Y2E4 1556 aa9.45□□□□□ -0.9
SDR42E1P1-201ENST00000611327 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
SDR42E1P1-201ENST00000611327 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
SDR42E1P1-201ENST00000611327 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
SDR42E1P1-201ENST00000611327 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.9
SDR42E1P1-201ENST00000611327 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
SDR42E1P1-201ENST00000611327 REREQ9P2R6 1566 aa9.42□□□□□ -0.9
SDR42E1P1-201ENST00000611327 CEP170BQ9Y4F5 1589 aaPredicted RBP9.42□□□□□ -0.9
SDR42E1P1-201ENST00000611327 MAMSTRQ6ZN01 415 aa9.42□□□□□ -0.9
SDR42E1P1-201ENST00000611327 SETD1AO15047 1707 aaKnown RBP9.42□□□□□ -0.9
SDR42E1P1-201ENST00000611327 KDM5CP41229 1560 aa9.41□□□□□ -0.9
SDR42E1P1-201ENST00000611327 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
SDR42E1P1-201ENST00000611327 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
SDR42E1P1-201ENST00000611327 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
SDR42E1P1-201ENST00000611327 ABCA6Q8N139 1617 aa9.4□□□□□ -0.9
SDR42E1P1-201ENST00000611327 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
SDR42E1P1-201ENST00000611327 SAMD9Q5K651 1589 aa9.39□□□□□ -0.91
SDR42E1P1-201ENST00000611327 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
SDR42E1P1-201ENST00000611327 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
SDR42E1P1-201ENST00000611327 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
SDR42E1P1-201ENST00000611327 CDK13Q14004 1512 aaKnown RBP9.37□□□□□ -0.91
SDR42E1P1-201ENST00000611327 SUPT6HQ7KZ85 1726 aaKnown RBP9.37□□□□□ -0.91
SDR42E1P1-201ENST00000611327 ANKLE2Q86XL3 938 aa9.37□□□□□ -0.91
SDR42E1P1-201ENST00000611327 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
SDR42E1P1-201ENST00000611327 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
SDR42E1P1-201ENST00000611327 A2ML1A8K2U0 1454 aa9.36□□□□□ -0.91
SDR42E1P1-201ENST00000611327 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
SDR42E1P1-201ENST00000611327 VWDEQ8N2E2 1590 aa9.36□□□□□ -0.91
SDR42E1P1-201ENST00000611327 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
SDR42E1P1-201ENST00000611327 NEURL4Q96JN8 1562 aa9.35□□□□□ -0.91
SDR42E1P1-201ENST00000611327 ATP1B4Q9UN42 357 aaPredicted RBP9.35□□□□□ -0.91
SDR42E1P1-201ENST00000611327 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
SDR42E1P1-201ENST00000611327 GGT6Q6P531 493 aa9.34□□□□□ -0.91
SDR42E1P1-201ENST00000611327 RNF17Q9BXT8 1623 aaKnown RBP9.34□□□□□ -0.91
SDR42E1P1-201ENST00000611327 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.92
SDR42E1P1-201ENST00000611327 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
SDR42E1P1-201ENST00000611327 DNMT1P26358 1616 aaKnown RBP9.33□□□□□ -0.92
SDR42E1P1-201ENST00000611327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.33□□□□□ -0.92
SDR42E1P1-201ENST00000611327 ASTLQ6HA08 431 aaPredicted RBP9.32□□□□□ -0.92
SDR42E1P1-201ENST00000611327 CDK11AQ9UQ88 783 aaPredicted RBP9.32□□□□□ -0.92
SDR42E1P1-201ENST00000611327 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
SDR42E1P1-201ENST00000611327 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
SDR42E1P1-201ENST00000611327 CLTCQ00610 1675 aaKnown RBP9.31□□□□□ -0.92
SDR42E1P1-201ENST00000611327 TNRQ92752 1358 aa9.3□□□□□ -0.92
SDR42E1P1-201ENST00000611327 C7P10643 843 aa9.3□□□□□ -0.92
SDR42E1P1-201ENST00000611327 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
SDR42E1P1-201ENST00000611327 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
SDR42E1P1-201ENST00000611327 POLR1AO95602 1720 aaPredicted RBP9.3□□□□□ -0.92
SDR42E1P1-201ENST00000611327 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
SDR42E1P1-201ENST00000611327 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
SDR42E1P1-201ENST00000611327 FAM135BQ49AJ0 1406 aa9.29□□□□□ -0.92
SDR42E1P1-201ENST00000611327 KIF14Q15058 1648 aa9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 KIDINS220Q9ULH0 1771 aa9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 ABCC1P33527 1531 aa9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 ZNF772Q68DY9 489 aaPredicted RBP9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 CLIP1P30622 1438 aa9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 SPAG9O60271 1321 aaKnown RBP9.28□□□□□ -0.92
SDR42E1P1-201ENST00000611327 SYNMO15061 1565 aa9.27□□□□□ -0.93
SDR42E1P1-201ENST00000611327 MED14O60244 1454 aa9.27□□□□□ -0.93
SDR42E1P1-201ENST00000611327 TROQ12816 1431 aaPredicted RBP9.26□□□□□ -0.93
SDR42E1P1-201ENST00000611327 RXRBP28702 533 aa9.26□□□□□ -0.93
SDR42E1P1-201ENST00000611327 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
SDR42E1P1-201ENST00000611327 FAM135AQ9P2D6 1515 aa9.26□□□□□ -0.93
SDR42E1P1-201ENST00000611327 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
SDR42E1P1-201ENST00000611327 A2MP01023 1474 aa9.25□□□□□ -0.93
SDR42E1P1-201ENST00000611327 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
SDR42E1P1-201ENST00000611327 SAMD9LQ8IVG5 1584 aa9.24□□□□□ -0.93
SDR42E1P1-201ENST00000611327 JCADQ9P266 1359 aa9.24□□□□□ -0.93
SDR42E1P1-201ENST00000611327 IQGAP1P46940 1657 aa9.23□□□□□ -0.93
SDR42E1P1-201ENST00000611327 UGGT1Q9NYU2 1555 aa9.23□□□□□ -0.93
SDR42E1P1-201ENST00000611327 DEPDC5O75140 1603 aa9.23□□□□□ -0.93
SDR42E1P1-201ENST00000611327 ITSN2Q9NZM3 1697 aa9.23□□□□□ -0.93
SDR42E1P1-201ENST00000611327 HNRNPMP52272 730 aaKnown RBP eCLIP9.22□□□□□ -0.93
SDR42E1P1-201ENST00000611327 PLXNC1O60486 1568 aa9.21□□□□□ -0.93
SDR42E1P1-201ENST00000611327 CSRNP3Q8WYN3 585 aa9.21□□□□□ -0.94
SDR42E1P1-201ENST00000611327 STAG3Q9UJ98 1225 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms