RNA–Protein interactions for RNA: ENST00000611327.1

SDR42E1P1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1, humanhuman

BASIC

Gene SDR42E1P1, Length 477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P1-201ENST00000611327 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
SDR42E1P1-201ENST00000611327 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
SDR42E1P1-201ENST00000611327 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
SDR42E1P1-201ENST00000611327 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
SDR42E1P1-201ENST00000611327 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
SDR42E1P1-201ENST00000611327 FOXD1Q16676 465 aa15.59■□□□□ 0.09
SDR42E1P1-201ENST00000611327 MSH5O43196 834 aa14.9□□□□□ -0.02
SDR42E1P1-201ENST00000611327 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
SDR42E1P1-201ENST00000611327 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
SDR42E1P1-201ENST00000611327 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
SDR42E1P1-201ENST00000611327 ADRA2BP18089 450 aa14.01□□□□□ -0.17
SDR42E1P1-201ENST00000611327 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
SDR42E1P1-201ENST00000611327 ABCC9O60706 1549 aa13.74□□□□□ -0.21
SDR42E1P1-201ENST00000611327 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
SDR42E1P1-201ENST00000611327 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
SDR42E1P1-201ENST00000611327 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
SDR42E1P1-201ENST00000611327 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
SDR42E1P1-201ENST00000611327 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
SDR42E1P1-201ENST00000611327 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
SDR42E1P1-201ENST00000611327 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
SDR42E1P1-201ENST00000611327 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
SDR42E1P1-201ENST00000611327 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
SDR42E1P1-201ENST00000611327 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
SDR42E1P1-201ENST00000611327 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
SDR42E1P1-201ENST00000611327 NACADO15069 1562 aa12.48□□□□□ -0.41
SDR42E1P1-201ENST00000611327 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
SDR42E1P1-201ENST00000611327 POTEHQ6S545 545 aa12.45□□□□□ -0.42
SDR42E1P1-201ENST00000611327 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
SDR42E1P1-201ENST00000611327 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
SDR42E1P1-201ENST00000611327 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
SDR42E1P1-201ENST00000611327 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
SDR42E1P1-201ENST00000611327 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
SDR42E1P1-201ENST00000611327 CC2D2AQ9P2K1 1620 aa12.31□□□□□ -0.44
SDR42E1P1-201ENST00000611327 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
SDR42E1P1-201ENST00000611327 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
SDR42E1P1-201ENST00000611327 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
SDR42E1P1-201ENST00000611327 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
SDR42E1P1-201ENST00000611327 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
SDR42E1P1-201ENST00000611327 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
SDR42E1P1-201ENST00000611327 CUX2O14529 1486 aa12.06□□□□□ -0.48
SDR42E1P1-201ENST00000611327 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
SDR42E1P1-201ENST00000611327 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
SDR42E1P1-201ENST00000611327 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
SDR42E1P1-201ENST00000611327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
SDR42E1P1-201ENST00000611327 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
SDR42E1P1-201ENST00000611327 ZCCHC6Q5VYS8 1495 aaKnown RBP11.67□□□□□ -0.54
SDR42E1P1-201ENST00000611327 NESP48681 1621 aa11.6□□□□□ -0.55
SDR42E1P1-201ENST00000611327 DSG3P32926 999 aa11.57□□□□□ -0.56
SDR42E1P1-201ENST00000611327 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
SDR42E1P1-201ENST00000611327 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
SDR42E1P1-201ENST00000611327 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
SDR42E1P1-201ENST00000611327 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
SDR42E1P1-201ENST00000611327 CAPN15O75808 1086 aa11.47□□□□□ -0.57
SDR42E1P1-201ENST00000611327 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
SDR42E1P1-201ENST00000611327 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
SDR42E1P1-201ENST00000611327 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
SDR42E1P1-201ENST00000611327 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
SDR42E1P1-201ENST00000611327 BAZ1AQ9NRL2 1556 aaPredicted RBP11.39□□□□□ -0.59
SDR42E1P1-201ENST00000611327 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
SDR42E1P1-201ENST00000611327 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
SDR42E1P1-201ENST00000611327 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
SDR42E1P1-201ENST00000611327 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
SDR42E1P1-201ENST00000611327 KIF21AQ7Z4S6 1674 aa11.35□□□□□ -0.59
SDR42E1P1-201ENST00000611327 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
SDR42E1P1-201ENST00000611327 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
SDR42E1P1-201ENST00000611327 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
SDR42E1P1-201ENST00000611327 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
SDR42E1P1-201ENST00000611327 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
SDR42E1P1-201ENST00000611327 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
SDR42E1P1-201ENST00000611327 WDR62O43379 1518 aa11.27□□□□□ -0.61
SDR42E1P1-201ENST00000611327 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
SDR42E1P1-201ENST00000611327 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
SDR42E1P1-201ENST00000611327 ARHGEF11O15085 1522 aa11.24□□□□□ -0.61
SDR42E1P1-201ENST00000611327 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
SDR42E1P1-201ENST00000611327 CADPSQ9ULU8 1353 aa11.2□□□□□ -0.62
SDR42E1P1-201ENST00000611327 ABCB7O75027 752 aa11.18□□□□□ -0.62
SDR42E1P1-201ENST00000611327 CEP164Q9UPV0 1460 aa11.14□□□□□ -0.63
SDR42E1P1-201ENST00000611327 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
SDR42E1P1-201ENST00000611327 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
SDR42E1P1-201ENST00000611327 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
SDR42E1P1-201ENST00000611327 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
SDR42E1P1-201ENST00000611327 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
SDR42E1P1-201ENST00000611327 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
SDR42E1P1-201ENST00000611327 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
SDR42E1P1-201ENST00000611327 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
SDR42E1P1-201ENST00000611327 ZNF608Q9ULD9 1512 aaPredicted RBP11□□□□□ -0.65
SDR42E1P1-201ENST00000611327 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
SDR42E1P1-201ENST00000611327 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
SDR42E1P1-201ENST00000611327 FBLN2P98095 1184 aa10.97□□□□□ -0.65
SDR42E1P1-201ENST00000611327 APLP2Q06481 763 aa10.97□□□□□ -0.65
SDR42E1P1-201ENST00000611327 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
SDR42E1P1-201ENST00000611327 IFT140Q96RY7 1462 aa10.94□□□□□ -0.66
SDR42E1P1-201ENST00000611327 CFTRP13569 1480 aa10.92□□□□□ -0.66
SDR42E1P1-201ENST00000611327 CHD1O14646 1710 aa10.86□□□□□ -0.67
SDR42E1P1-201ENST00000611327 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
SDR42E1P1-201ENST00000611327 AQRO60306 1485 aaKnown RBP eCLIP10.83□□□□□ -0.68
SDR42E1P1-201ENST00000611327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
SDR42E1P1-201ENST00000611327 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
SDR42E1P1-201ENST00000611327 WIZO95785 1651 aa10.79□□□□□ -0.68
SDR42E1P1-201ENST00000611327 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms