RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 WDR7Q9Y4E6 1490 aa32.99■■■□□ 2.87
HOXA4-204ENST00000610970 CCDC144AA2RUR9 1427 aa32.97■■■□□ 2.87
HOXA4-204ENST00000610970 ATP10AO60312 1499 aa32.96■■■□□ 2.87
HOXA4-204ENST00000610970 SUPT16HQ9Y5B9 1047 aaKnown RBP32.95■■■□□ 2.87
HOXA4-204ENST00000610970 ABCA9Q8IUA7 1624 aa32.92■■■□□ 2.86
HOXA4-204ENST00000610970 TRAPPC8Q9Y2L5 1435 aa32.91■■■□□ 2.86
HOXA4-204ENST00000610970 ZNF326Q5BKZ1 582 aaKnown RBP32.91■■■□□ 2.86
HOXA4-204ENST00000610970 TRHP20396 242 aaPredicted RBP32.91■■■□□ 2.86
HOXA4-204ENST00000610970 PRKRIP1Q9H875 184 aaPredicted RBP32.91■■■□□ 2.86
HOXA4-204ENST00000610970 ROCK2O75116 1388 aaKnown RBP32.9■■■□□ 2.86
HOXA4-204ENST00000610970 BCORL1Q5H9F3 1711 aa32.89■■■□□ 2.86
HOXA4-204ENST00000610970 PLA2R1Q13018 1463 aa32.88■■■□□ 2.85
HOXA4-204ENST00000610970 DCAF11Q8TEB1 546 aa32.87■■■□□ 2.85
HOXA4-204ENST00000610970 CARD11Q9BXL7 1154 aa32.86■■■□□ 2.85
HOXA4-204ENST00000610970 NPM1P06748 294 aaKnown RBP eCLIP32.85■■■□□ 2.85
HOXA4-204ENST00000610970 SPAG9O60271 1321 aaKnown RBP32.85■■■□□ 2.85
HOXA4-204ENST00000610970 ZFYVE16Q7Z3T8 1539 aa32.84■■■□□ 2.85
HOXA4-204ENST00000610970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.83■■■□□ 2.85
HOXA4-204ENST00000610970 ASXL2Q76L83 1435 aa32.83■■■□□ 2.85
HOXA4-204ENST00000610970 PRAG1Q86YV5 1406 aa32.82■■■□□ 2.84
HOXA4-204ENST00000610970 TRPM1Q7Z4N2 1603 aa32.82■■■□□ 2.84
HOXA4-204ENST00000610970 LAMC1P11047 1609 aa32.8■■■□□ 2.84
HOXA4-204ENST00000610970 FANCAO15360 1455 aa32.8■■■□□ 2.84
HOXA4-204ENST00000610970 KDM2AQ9Y2K7 1162 aa32.8■■■□□ 2.84
HOXA4-204ENST00000610970 EIF2AK4Q9P2K8 1649 aaKnown RBP32.77■■■□□ 2.84
HOXA4-204ENST00000610970 INO80Q9ULG1 1556 aaPredicted RBP32.77■■■□□ 2.84
HOXA4-204ENST00000610970 DEPDC5O75140 1603 aa32.77■■■□□ 2.84
HOXA4-204ENST00000610970 GPRASP1Q5JY77 1395 aa32.75■■■□□ 2.83
HOXA4-204ENST00000610970 A2MP01023 1474 aa32.74■■■□□ 2.83
HOXA4-204ENST00000610970 DHX29Q7Z478 1369 aaKnown RBP32.74■■■□□ 2.83
HOXA4-204ENST00000610970 ATP7AQ04656 1500 aa32.73■■■□□ 2.83
HOXA4-204ENST00000610970 HNRNPUQ00839 825 aaKnown RBP eCLIP32.71■■■□□ 2.83
HOXA4-204ENST00000610970 AFAP1Q8N556 730 aa32.69■■■□□ 2.82
HOXA4-204ENST00000610970 NEFLP07196 543 aa32.68■■■□□ 2.82
HOXA4-204ENST00000610970 ADGRL1O94910 1474 aa32.68■■■□□ 2.82
HOXA4-204ENST00000610970 MRS2Q9HD23 443 aa32.67■■■□□ 2.82
HOXA4-204ENST00000610970 E9PCH4 1651 aa32.67■■■□□ 2.82
HOXA4-204ENST00000610970 ST20-MTHFSA0A0A6YYL1 179 aa32.66■■■□□ 2.82
HOXA4-204ENST00000610970 STAC3Q96MF2 364 aa32.66■■■□□ 2.82
HOXA4-204ENST00000610970 TET3O43151 1660 aa32.65■■■□□ 2.82
HOXA4-204ENST00000610970 TRPM2O94759 1503 aa32.65■■■□□ 2.82
HOXA4-204ENST00000610970 VWDEQ8N2E2 1590 aa32.64■■■□□ 2.82
HOXA4-204ENST00000610970 KANK1Q14678 1352 aa32.64■■■□□ 2.82
HOXA4-204ENST00000610970 SCAPERQ9BY12 1400 aa32.64■■■□□ 2.82
HOXA4-204ENST00000610970 PTPRTO14522 1441 aa32.63■■■□□ 2.81
HOXA4-204ENST00000610970 KTN1Q86UP2 1357 aaKnown RBP32.62■■■□□ 2.81
HOXA4-204ENST00000610970 PRDM15P57071 1507 aaPredicted RBP32.62■■■□□ 2.81
HOXA4-204ENST00000610970 RGL3Q3MIN7 710 aa32.62■■■□□ 2.81
HOXA4-204ENST00000610970 CFAP74Q9C0B2 1584 aa32.61■■■□□ 2.81
HOXA4-204ENST00000610970 CCDC184Q52MB2 194 aa32.6■■■□□ 2.81
HOXA4-204ENST00000610970 SPHKAPQ2M3C7 1700 aa32.6■■■□□ 2.81
HOXA4-204ENST00000610970 CEP152O94986 1710 aa32.58■■■□□ 2.81
HOXA4-204ENST00000610970 FKBP8Q14318 412 aa32.57■■■□□ 2.81
HOXA4-204ENST00000610970 NEURL4Q96JN8 1562 aa32.57■■■□□ 2.8
HOXA4-204ENST00000610970 POLR3GLQ9BT43 218 aa32.55■■■□□ 2.8
HOXA4-204ENST00000610970 RNF17Q9BXT8 1623 aaKnown RBP32.54■■■□□ 2.8
HOXA4-204ENST00000610970 ZNF518AQ6AHZ1 1483 aa32.53■■■□□ 2.8
HOXA4-204ENST00000610970 KIF13AQ9H1H9 1805 aa32.52■■■□□ 2.8
HOXA4-204ENST00000610970 ZBED9Q6R2W3 1325 aa32.52■■■□□ 2.8
HOXA4-204ENST00000610970 FAM9BQ8IZU0 186 aa32.5■■■□□ 2.79
HOXA4-204ENST00000610970 NBPF1Q3BBV0 1214 aa32.49■■■□□ 2.79
HOXA4-204ENST00000610970 KIDINS220Q9ULH0 1771 aa32.48■■■□□ 2.79
HOXA4-204ENST00000610970 RALBP1Q15311 655 aa32.47■■■□□ 2.79
HOXA4-204ENST00000610970 COL17A1Q9UMD9 1497 aaPredicted RBP32.47■■■□□ 2.79
HOXA4-204ENST00000610970 MADDQ8WXG6 1647 aa32.46■■■□□ 2.79
HOXA4-204ENST00000610970 CLTCL1P53675 1640 aa32.46■■■□□ 2.79
HOXA4-204ENST00000610970 MROH1Q8NDA8 1641 aa32.46■■■□□ 2.79
HOXA4-204ENST00000610970 FAM69CQ0P6D2 419 aa32.46■■■□□ 2.79
HOXA4-204ENST00000610970 KIF3BO15066 747 aa32.44■■■□□ 2.78
HOXA4-204ENST00000610970 CD109Q6YHK3 1445 aa32.43■■■□□ 2.78
HOXA4-204ENST00000610970 MYT1LQ9UL68 1186 aa32.43■■■□□ 2.78
HOXA4-204ENST00000610970 LMTK2Q8IWU2 1503 aa32.42■■■□□ 2.78
HOXA4-204ENST00000610970 DIP2BQ9P265 1576 aa32.42■■■□□ 2.78
HOXA4-204ENST00000610970 GLI2P10070 1586 aa32.41■■■□□ 2.78
HOXA4-204ENST00000610970 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
HOXA4-204ENST00000610970 TESK2Q96S53 571 aa32.39■■■□□ 2.78
HOXA4-204ENST00000610970 MLH3Q9UHC1 1453 aa32.39■■■□□ 2.78
HOXA4-204ENST00000610970 BRD4O60885 1362 aaPredicted RBP32.38■■■□□ 2.77
HOXA4-204ENST00000610970 ERICH6BQ5W0A0 696 aa32.38■■■□□ 2.77
HOXA4-204ENST00000610970 KIAA1210Q9ULL0 1709 aa32.38■■■□□ 2.77
HOXA4-204ENST00000610970 POGZQ7Z3K3 1410 aa32.38■■■□□ 2.77
HOXA4-204ENST00000610970 MYBBP1AQ9BQG0 1328 aaKnown RBP32.38■■■□□ 2.77
HOXA4-204ENST00000610970 EFCAB6Q5THR3 1501 aa32.38■■■□□ 2.77
HOXA4-204ENST00000610970 IQGAP1P46940 1657 aa32.37■■■□□ 2.77
HOXA4-204ENST00000610970 TMF1P82094 1093 aa32.36■■■□□ 2.77
HOXA4-204ENST00000610970 MAP3K4Q9Y6R4 1608 aa32.34■■■□□ 2.77
HOXA4-204ENST00000610970 NEO1Q92859 1461 aa32.32■■■□□ 2.76
HOXA4-204ENST00000610970 TMC1Q8TDI8 760 aa32.32■■■□□ 2.76
HOXA4-204ENST00000610970 HECW2Q9P2P5 1572 aa32.31■■■□□ 2.76
HOXA4-204ENST00000610970 PNISRQ8TF01 805 aaKnown RBP32.31■■■□□ 2.76
HOXA4-204ENST00000610970 KIF1BO60333 1816 aa32.29■■■□□ 2.76
HOXA4-204ENST00000610970 MYOM2P54296 1465 aa32.29■■■□□ 2.76
HOXA4-204ENST00000610970 SCAF11Q99590 1463 aaKnown RBP32.28■■■□□ 2.76
HOXA4-204ENST00000610970 PARD3Q8TEW0 1356 aa32.28■■■□□ 2.76
HOXA4-204ENST00000610970 DISP3Q9P2K9 1392 aa32.28■■■□□ 2.76
HOXA4-204ENST00000610970 BCANQ96GW7 911 aa32.27■■■□□ 2.76
HOXA4-204ENST00000610970 PER1O15534 1290 aaPredicted RBP32.26■■■□□ 2.76
HOXA4-204ENST00000610970 PPRC1Q5VV67 1664 aaKnown RBP32.26■■■□□ 2.75
HOXA4-204ENST00000610970 LRPPRCP42704 1394 aaKnown RBP32.25■■■□□ 2.75
HOXA4-204ENST00000610970 CDCA8Q53HL2 280 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms