RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
PABPC1-224ENST00000610907 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
PABPC1-224ENST00000610907 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
PABPC1-224ENST00000610907 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
PABPC1-224ENST00000610907 ABCC1P33527 1531 aa14.36□□□□□ -0.11
PABPC1-224ENST00000610907 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
PABPC1-224ENST00000610907 DCAF11Q8TEB1 546 aa14.35□□□□□ -0.11
PABPC1-224ENST00000610907 BCORL1Q5H9F3 1711 aa14.35□□□□□ -0.11
PABPC1-224ENST00000610907 FKBP8Q14318 412 aa14.34□□□□□ -0.11
PABPC1-224ENST00000610907 DHX29Q7Z478 1369 aaKnown RBP14.33□□□□□ -0.12
PABPC1-224ENST00000610907 PLA2R1Q13018 1463 aa14.32□□□□□ -0.12
PABPC1-224ENST00000610907 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
PABPC1-224ENST00000610907 KTN1Q86UP2 1357 aaKnown RBP14.31□□□□□ -0.12
PABPC1-224ENST00000610907 PRAG1Q86YV5 1406 aa14.31□□□□□ -0.12
PABPC1-224ENST00000610907 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
PABPC1-224ENST00000610907 KDM2AQ9Y2K7 1162 aa14.3□□□□□ -0.12
PABPC1-224ENST00000610907 LAMC1P11047 1609 aa14.3□□□□□ -0.12
PABPC1-224ENST00000610907 TRPM1Q7Z4N2 1603 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 WDR7Q9Y4E6 1490 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.12
PABPC1-224ENST00000610907 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
PABPC1-224ENST00000610907 ZBED9Q6R2W3 1325 aa14.29□□□□□ -0.12
PABPC1-224ENST00000610907 EIF2AK4Q9P2K8 1649 aaKnown RBP14.28□□□□□ -0.12
PABPC1-224ENST00000610907 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.12
PABPC1-224ENST00000610907 A2MP01023 1474 aa14.27□□□□□ -0.13
PABPC1-224ENST00000610907 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
PABPC1-224ENST00000610907 FAM9BQ8IZU0 186 aa14.26□□□□□ -0.13
PABPC1-224ENST00000610907 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
PABPC1-224ENST00000610907 RALBP1Q15311 655 aa14.23□□□□□ -0.13
PABPC1-224ENST00000610907 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
PABPC1-224ENST00000610907 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-224ENST00000610907 FANCAO15360 1455 aa14.22□□□□□ -0.13
PABPC1-224ENST00000610907 E9PCH4 1651 aa14.22□□□□□ -0.13
PABPC1-224ENST00000610907 RGL3Q3MIN7 710 aa14.22□□□□□ -0.13
PABPC1-224ENST00000610907 POLR3GLQ9BT43 218 aa14.22□□□□□ -0.13
PABPC1-224ENST00000610907 PTPRTO14522 1441 aa14.21□□□□□ -0.13
PABPC1-224ENST00000610907 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.13
PABPC1-224ENST00000610907 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.14
PABPC1-224ENST00000610907 AFAP1Q8N556 730 aa14.21□□□□□ -0.14
PABPC1-224ENST00000610907 KANK1Q14678 1352 aa14.2□□□□□ -0.14
PABPC1-224ENST00000610907 TRPM2O94759 1503 aa14.2□□□□□ -0.14
PABPC1-224ENST00000610907 ATP7AQ04656 1500 aa14.2□□□□□ -0.14
PABPC1-224ENST00000610907 TSHZ2Q9NRE2 1034 aa14.2□□□□□ -0.14
PABPC1-224ENST00000610907 BRD4O60885 1362 aaPredicted RBP14.19□□□□□ -0.14
PABPC1-224ENST00000610907 BCANQ96GW7 911 aa14.19□□□□□ -0.14
PABPC1-224ENST00000610907 VWDEQ8N2E2 1590 aa14.19□□□□□ -0.14
PABPC1-224ENST00000610907 NEURL4Q96JN8 1562 aa14.19□□□□□ -0.14
PABPC1-224ENST00000610907 TET3O43151 1660 aa14.19□□□□□ -0.14
PABPC1-224ENST00000610907 MYBBP1AQ9BQG0 1328 aaKnown RBP14.18□□□□□ -0.14
PABPC1-224ENST00000610907 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
PABPC1-224ENST00000610907 ASXL2Q76L83 1435 aa14.17□□□□□ -0.14
PABPC1-224ENST00000610907 TMC1Q8TDI8 760 aa14.17□□□□□ -0.14
PABPC1-224ENST00000610907 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
PABPC1-224ENST00000610907 ADGRL1O94910 1474 aa14.17□□□□□ -0.14
PABPC1-224ENST00000610907 COL17A1Q9UMD9 1497 aaPredicted RBP14.17□□□□□ -0.14
PABPC1-224ENST00000610907 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
PABPC1-224ENST00000610907 RNF17Q9BXT8 1623 aaKnown RBP14.16□□□□□ -0.14
PABPC1-224ENST00000610907 TESK2Q96S53 571 aa14.16□□□□□ -0.14
PABPC1-224ENST00000610907 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
PABPC1-224ENST00000610907 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
PABPC1-224ENST00000610907 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
PABPC1-224ENST00000610907 SPHKAPQ2M3C7 1700 aa14.16□□□□□ -0.14
PABPC1-224ENST00000610907 SMG6Q86US8 1419 aaKnown RBP14.15□□□□□ -0.14
PABPC1-224ENST00000610907 CEP152O94986 1710 aa14.15□□□□□ -0.14
PABPC1-224ENST00000610907 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
PABPC1-224ENST00000610907 TMF1P82094 1093 aa14.15□□□□□ -0.14
PABPC1-224ENST00000610907 LRPPRCP42704 1394 aaKnown RBP14.14□□□□□ -0.15
PABPC1-224ENST00000610907 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
PABPC1-224ENST00000610907 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-224ENST00000610907 MADDQ8WXG6 1647 aa14.13□□□□□ -0.15
PABPC1-224ENST00000610907 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
PABPC1-224ENST00000610907 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
PABPC1-224ENST00000610907 PPP4R2Q9NY27 417 aa14.12□□□□□ -0.15
PABPC1-224ENST00000610907 CFAP74Q9C0B2 1584 aa14.12□□□□□ -0.15
PABPC1-224ENST00000610907 ZNF518AQ6AHZ1 1483 aa14.11□□□□□ -0.15
PABPC1-224ENST00000610907 INSRP06213 1382 aa14.11□□□□□ -0.15
PABPC1-224ENST00000610907 KIF3BO15066 747 aa14.1□□□□□ -0.15
PABPC1-224ENST00000610907 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
PABPC1-224ENST00000610907 NUDCQ9Y266 331 aa14.1□□□□□ -0.15
PABPC1-224ENST00000610907 CLTCL1P53675 1640 aa14.1□□□□□ -0.15
PABPC1-224ENST00000610907 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
PABPC1-224ENST00000610907 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
PABPC1-224ENST00000610907 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
PABPC1-224ENST00000610907 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
PABPC1-224ENST00000610907 SCAF11Q99590 1463 aaKnown RBP14.09□□□□□ -0.15
PABPC1-224ENST00000610907 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.15
PABPC1-224ENST00000610907 MROH1Q8NDA8 1641 aa14.08□□□□□ -0.16
PABPC1-224ENST00000610907 KIDINS220Q9ULH0 1771 aa14.08□□□□□ -0.16
PABPC1-224ENST00000610907 MYT1Q01538 1121 aa14.08□□□□□ -0.16
PABPC1-224ENST00000610907 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
PABPC1-224ENST00000610907 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
PABPC1-224ENST00000610907 MLH3Q9UHC1 1453 aa14.07□□□□□ -0.16
PABPC1-224ENST00000610907 EIF3AQ14152 1382 aaKnown RBP14.06□□□□□ -0.16
PABPC1-224ENST00000610907 MYOM2P54296 1465 aa14.06□□□□□ -0.16
PABPC1-224ENST00000610907 EFCAB6Q5THR3 1501 aa14.06□□□□□ -0.16
PABPC1-224ENST00000610907 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms